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HG10004283 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004283
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionNADH-ubiquinone oxidoreductase chain 5
Genome locationChr08:15547365..15548020
RNA-Seq ExpressionHG10004283
SyntenyHG10004283
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144225.1 uncharacterized protein LOC101213289 [Cucumis sativus]3.2e-2685.54Show/hide
Query:  MLSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRG--SAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRI
        MLSLNS+SQFLV F+C C  SSILH   SSLEAKKRRSRG  SAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSR+
Subjt:  MLSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRG--SAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRI
XP_008464874.1 PREDICTED: uncharacterized protein LOC103502637 isoform X1 [Cucumis melo]2.9e-2786.75Show/hide
Query:  MLSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRG--SAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRI
        MLSLNS+SQFLVRF+C C +SSILH   SSLEAKKRRSRG  SAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSR+
Subjt:  MLSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRG--SAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRI
XP_008464875.1 PREDICTED: uncharacterized protein LOC103502637 isoform X2 [Cucumis melo]2.9e-2782.95Show/hide
Query:  MLSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRG--SAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRILLNKC
        MLSLNS+SQFLVRF+C C +SSILH   SSLEAKKRRSRG  SAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSR     C
Subjt:  MLSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRG--SAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRILLNKC
XP_022951473.1 uncharacterized protein LOC111454282 [Cucurbita moschata]1.4e-2481.25Show/hide
Query:  LSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRGSAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRI
        LSLNS+SQFL+ FV  C KSS LHRRP+S EAK+ RSRG+AMITRSNLVEQLREYQIRSKHEWASVS FSS SNITSSR+
Subjt:  LSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRGSAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRI
XP_038884232.1 uncharacterized protein LOC120075129 [Benincasa hispida]2.0e-3193.83Show/hide
Query:  MLSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRGSAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRI
        MLSLNS+SQFLVRFVC CVKSSILH RPSSLEAKKR+SRGSAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSR+
Subjt:  MLSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRGSAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRI
TrEMBL top hitse value%identityAlignment
A0A0A0KIH9 Uncharacterized protein1.6e-2685.54Show/hide
Query:  MLSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRG--SAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRI
        MLSLNS+SQFLV F+C C  SSILH   SSLEAKKRRSRG  SAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSR+
Subjt:  MLSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRG--SAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRI
A0A1S3CMK7 uncharacterized protein LOC103502637 isoform X11.4e-2786.75Show/hide
Query:  MLSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRG--SAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRI
        MLSLNS+SQFLVRF+C C +SSILH   SSLEAKKRRSRG  SAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSR+
Subjt:  MLSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRG--SAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRI
A0A1S3CN04 uncharacterized protein LOC103502637 isoform X21.4e-2782.95Show/hide
Query:  MLSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRG--SAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRILLNKC
        MLSLNS+SQFLVRF+C C +SSILH   SSLEAKKRRSRG  SAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSR     C
Subjt:  MLSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRG--SAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRILLNKC
A0A6J1G568 uncharacterized protein LOC1114507865.6e-2479.01Show/hide
Query:  MLSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRGSAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRI
        MLSLNS+SQFLV F+C CVK  ILHRRPS    +K  SRG+AMITRSNLVEQLREYQIRSKH+WAS SFFSSTSNITSSR+
Subjt:  MLSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRGSAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRI
A0A6J1GHS6 uncharacterized protein LOC1114542826.6e-2581.25Show/hide
Query:  LSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRGSAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRI
        LSLNS+SQFL+ FV  C KSS LHRRP+S EAK+ RSRG+AMITRSNLVEQLREYQIRSKHEWASVS FSS SNITSSR+
Subjt:  LSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRGSAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G20460.1 unknown protein7.5e-1387.18Show/hide
Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRI
        MITRSNL EQLREYQIRSKH+WASVSFFSSTSN +SSR+
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRI
AT1G76185.1 unknown protein7.5e-1387.18Show/hide
Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRI
        MITRSNL EQLREYQIRSKH+WASVSFFSSTSN +SSR+
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTCTCTCAATTCCGTTTCTCAATTCCTTGTTCGATTCGTTTGTAGCTGTGTTAAATCCTCCATTCTCCACCGTCGCCCTTCCTCCCTTGAGGCAAAGAAGAGAAG
GTCTCGGGGTTCAGCCATGATTACTCGATCGAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCCAAGCACGAGTGGGCTTCCGTCTCCTTCTTCTCTTCTACCT
CCAATATTACATCCTCCAGAATTCTCTTAAACAAATGTCTGGATGCATCATGTCATCCTCTGGGTTTCAAGATTTTTGCTTTGTCGGATGATGTGCTTTTCTTATTGTTG
AATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTCTCTCAATTCCGTTTCTCAATTCCTTGTTCGATTCGTTTGTAGCTGTGTTAAATCCTCCATTCTCCACCGTCGCCCTTCCTCCCTTGAGGCAAAGAAGAGAAG
GTCTCGGGGTTCAGCCATGATTACTCGATCGAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCCAAGCACGAGTGGGCTTCCGTCTCCTTCTTCTCTTCTACCT
CCAATATTACATCCTCCAGAATTCTCTTAAACAAATGTCTGGATGCATCATGTCATCCTCTGGGTTTCAAGATTTTTGCTTTGTCGGATGATGTGCTTTTCTTATTGTTG
AATTGA
Protein sequenceShow/hide protein sequence
MLSLNSVSQFLVRFVCSCVKSSILHRRPSSLEAKKRRSRGSAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRILLNKCLDASCHPLGFKIFALSDDVLFLLL
N