; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004354 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004354
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionclp protease adapter protein ClpF, chloroplastic
Genome locationChr08:16271950..16274419
RNA-Seq ExpressionHG10004354
SyntenyHG10004354
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0009840 - chloroplastic endopeptidase Clp complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsIPR001943 - UVR domain
IPR011722 - Hemimethylated DNA-binding domain
IPR036623 - Hemimethylated DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064751.1 UvrB/uvrC motif-containing protein isoform 1 [Cucumis melo var. makuwa]1.3e-15284.12Show/hide
Query:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTS-PCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILIF
        MVQDLSIHA+TALGDP VYGSALSW+RN K+FKQTSLTQLT RQCFWHQ MRSFSLTS PCRSKRG+FKI AGWLFKGGGQE G RIERSENANNDILIF
Subjt:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTS-PCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAGF-----------------------------ADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTE                                ADLQKA+ESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAGF-----------------------------ADLQKAVESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL
        AYESAEYSFRLGQKVRHK FGY GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLL PEEPDT  ERFDHPY+SFL
Subjt:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL

Query:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQDDEQRGDD
        FYGVD+AGDFIPIKQLREKYNRPRHEIPFDPQDDEQ+GDD
Subjt:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQDDEQRGDD

XP_004144184.1 clp protease adapter protein ClpF, chloroplastic isoform X1 [Cucumis sativus]8.5e-14982.65Show/hide
Query:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTS-PCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILIF
        MVQDLSIHA+TALGDP VYGSALSW+RNFK+FKQTSLTQLT RQCFWHQ MRSFSLTS P RSKRG+FKI AGWLFKGGGQE G RIERSENANNDILIF
Subjt:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTS-PCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAGF-----------------------------ADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTE                                ADLQKAVESENYALAAQLRDEISKLET+SLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAGF-----------------------------ADLQKAVESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL
        AYESAEYSFRLGQKVRHK FGYRGV+CGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLL PEEPDT  ERFDHPY+SFL
Subjt:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL

Query:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQDDEQRGDD
        FYGVD+AGDFIPIKQLREKYNRPR+E+PF  +DDEQ+GDD
Subjt:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQDDEQRGDD

XP_008445473.1 PREDICTED: uncharacterized protein LOC103488481 [Cucumis melo]1.6e-15283.82Show/hide
Query:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTS-PCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILIF
        MVQDLSIHA+TALGDP VYGSALSW+RN K+FKQTSLTQLT RQCFWHQ MRSFSLTS PCRSKRG+FKI AGWLFKGGGQE G RIERSENANNDILIF
Subjt:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTS-PCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAGF-----------------------------ADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTE                                ADLQKA+ESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAGF-----------------------------ADLQKAVESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL
        AYESAEYSFRLGQKVRHK FGY GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLL PEEPDT  ERFDHPY+SFL
Subjt:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL

Query:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQDDEQRGDD
        FYGVD+AGDFIPIKQLREKYNRPRHE+PFDPQDDEQ+GDD
Subjt:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQDDEQRGDD

XP_022997208.1 clp protease adapter protein ClpF, chloroplastic isoform X1 [Cucurbita maxima]3.3e-14579.77Show/hide
Query:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTS-PCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILIF
        MVQDLSIH+LT+LGDPKVYGS LSW+ N   FKQTS T LT RQ FWHQ MRSFSL S PCRSKRGNFK+ AGWLF+GGGQ L ARIERSENANNDILIF
Subjt:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTS-PCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAGF-----------------------------ADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELRTKLTE                                ADLQKA+ESENY  AAQLRD+ISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAGF-----------------------------ADLQKAVESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL
        AYESAEY+FRLGQK +HK FGYRGV+CGMDPVCCE+SSWMEIAQVEKLSRGSNQPFYQVLVDVRT+PDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL
Subjt:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL

Query:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQ-DDEQRGDD
        FYGVDTAGDFIP++QLREKYNRPRHE+P+D Q DDEQRGDD
Subjt:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQ-DDEQRGDD

XP_038886599.1 clp protease adapter protein ClpF, chloroplastic [Benincasa hispida]1.6e-15585.59Show/hide
Query:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTS-PCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILIF
        MVQDLSIHALTALGDPKVYGSALSW+RNFKHFKQTSLTQLT RQCFW+Q MRSFSLTS PC  KRGNFK+ AGWLFKGGGQELG RIERSENANNDILIF
Subjt:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTS-PCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAGF-----------------------------ADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELRTKLTE                                ADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAGF-----------------------------ADLQKAVESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL
        AYESAEYSFRLGQKVRHK FGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPD   E FDHPYNSFL
Subjt:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL

Query:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQDDEQRGDD
        FYGVDTAGDFIPIKQLREKYNRPR+E+PFDPQDDEQRGDD
Subjt:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQDDEQRGDD

TrEMBL top hitse value%identityAlignment
A0A0A0KD67 YccV-like domain-containing protein4.1e-14982.65Show/hide
Query:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTS-PCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILIF
        MVQDLSIHA+TALGDP VYGSALSW+RNFK+FKQTSLTQLT RQCFWHQ MRSFSLTS P RSKRG+FKI AGWLFKGGGQE G RIERSENANNDILIF
Subjt:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTS-PCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAGF-----------------------------ADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTE                                ADLQKAVESENYALAAQLRDEISKLET+SLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAGF-----------------------------ADLQKAVESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL
        AYESAEYSFRLGQKVRHK FGYRGV+CGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLL PEEPDT  ERFDHPY+SFL
Subjt:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL

Query:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQDDEQRGDD
        FYGVD+AGDFIPIKQLREKYNRPR+E+PF  +DDEQ+GDD
Subjt:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQDDEQRGDD

A0A1S3BCC1 uncharacterized protein LOC1034884818.0e-15383.82Show/hide
Query:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTS-PCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILIF
        MVQDLSIHA+TALGDP VYGSALSW+RN K+FKQTSLTQLT RQCFWHQ MRSFSLTS PCRSKRG+FKI AGWLFKGGGQE G RIERSENANNDILIF
Subjt:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTS-PCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAGF-----------------------------ADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTE                                ADLQKA+ESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAGF-----------------------------ADLQKAVESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL
        AYESAEYSFRLGQKVRHK FGY GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLL PEEPDT  ERFDHPY+SFL
Subjt:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL

Query:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQDDEQRGDD
        FYGVD+AGDFIPIKQLREKYNRPRHE+PFDPQDDEQ+GDD
Subjt:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQDDEQRGDD

A0A5A7VGB7 UvrB/uvrC motif-containing protein isoform 16.1e-15384.12Show/hide
Query:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTS-PCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILIF
        MVQDLSIHA+TALGDP VYGSALSW+RN K+FKQTSLTQLT RQCFWHQ MRSFSLTS PCRSKRG+FKI AGWLFKGGGQE G RIERSENANNDILIF
Subjt:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTS-PCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAGF-----------------------------ADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELR KLTE                                ADLQKA+ESENYALAAQLRDEISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAGF-----------------------------ADLQKAVESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL
        AYESAEYSFRLGQKVRHK FGY GVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLL PEEPDT  ERFDHPY+SFL
Subjt:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL

Query:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQDDEQRGDD
        FYGVD+AGDFIPIKQLREKYNRPRHEIPFDPQDDEQ+GDD
Subjt:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQDDEQRGDD

A0A6J1HFJ3 clp protease adapter protein ClpF, chloroplastic3.4e-14380.12Show/hide
Query:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTS-LTQLTFRQCFWHQSMRSFSLTS-PCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILI
        MVQDLSIHALTALGDPKVYGS LSW++N   FKQTS  T LT RQ FWHQ MRSFSL S PCR KRGNFK+ AGWLF+GGGQ L ARIERSENANNDILI
Subjt:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTS-LTQLTFRQCFWHQSMRSFSLTS-PCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILI

Query:  FFFQLDLATRVQYALNIEQYEIAQELRTKLTEAG-----------------------------FADLQKAVESENYALAAQLRDEISKLETESLAASAKV
        FFFQLDLATRVQYALNIEQYEIAQELRTKLTE                                ADLQKA+ESENY  AAQLRD+ISKLETESLAASAKV
Subjt:  FFFQLDLATRVQYALNIEQYEIAQELRTKLTEAG-----------------------------FADLQKAVESENYALAAQLRDEISKLETESLAASAKV

Query:  LAYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSF
        LAYESAEYSFRLGQK RHK FGYRGV+CGMDPVCCESSSWMEIAQVEKLSRG NQPFYQVLVDVRT+PDLLVAYVAEENLLVPEEPDT  ERFDHPYNSF
Subjt:  LAYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSF

Query:  LFYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQ-DDEQRGDD
        LFYGVD+AGDFIP+KQLREKYNRPRHE+P+DPQ DDEQRGDD
Subjt:  LFYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQ-DDEQRGDD

A0A6J1KD74 clp protease adapter protein ClpF, chloroplastic isoform X11.6e-14579.77Show/hide
Query:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTS-PCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILIF
        MVQDLSIH+LT+LGDPKVYGS LSW+ N   FKQTS T LT RQ FWHQ MRSFSL S PCRSKRGNFK+ AGWLF+GGGQ L ARIERSENANNDILIF
Subjt:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTS-PCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAGF-----------------------------ADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYALNIEQYEIAQELRTKLTE                                ADLQKA+ESENY  AAQLRD+ISKLETESLAASAKVL
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAGF-----------------------------ADLQKAVESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL
        AYESAEY+FRLGQK +HK FGYRGV+CGMDPVCCE+SSWMEIAQVEKLSRGSNQPFYQVLVDVRT+PDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL
Subjt:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL

Query:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQ-DDEQRGDD
        FYGVDTAGDFIP++QLREKYNRPRHE+P+D Q DDEQRGDD
Subjt:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQ-DDEQRGDD

SwissProt top hitse value%identityAlignment
O94952 F-box only protein 214.7e-0932.14Show/hide
Query:  FRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFLFYGVDTAG
        + +G  ++HK +GY  V+ G DP C     W+    V  L  G +QPFY VLV+     D    Y A+ENL    EP  ++    HP +   ++   T  
Subjt:  FRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFLFYGVDTAG

Query:  DFIPIKQLREKY
         +IP  +L  +Y
Subjt:  DFIPIKQLREKY

Q5R5S1 F-box only protein 214.7e-0932.14Show/hide
Query:  FRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFLFYGVDTAG
        + +G  ++HK +GY  V+ G DP C     W+    V  L  G +QPFY VLV+     D    Y A+ENL    EP  ++    HP +   ++   T  
Subjt:  FRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFLFYGVDTAG

Query:  DFIPIKQLREKY
         +IP  +L  +Y
Subjt:  DFIPIKQLREKY

Q67Y99 Clp protease adapter protein ClpF, chloroplastic2.4e-9859.4Show/hide
Query:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTSPCRSKRGNFKINAGWLFKGGGQE-LGARIERSENANNDILIF
        MVQ  S+  LT  G  KV  S+L  +      K +SL       C + +   SF        +R   ++ A W F+GGG++ L    ERSE+AN DILIF
Subjt:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTSPCRSKRGNFKINAGWLFKGGGQE-LGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAG-----------------------------FADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYA+N+EQY+IAQ+LR KLTE                                ADLQ A++SE+Y LAA+LRDEISKLE ESLA SAK L
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAG-----------------------------FADLQKAVESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL
        A+E AEY+FRLGQK+RHK FGYR VVCGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYVAE+NLL PE+PD   ERFDHPY SFL
Subjt:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL

Query:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQDDE
        +YG DTAGDFIP+KQLREKYNRPRHE+PFD QD++
Subjt:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQDDE

Q8VDH1 F-box only protein 218.0e-0929.77Show/hide
Query:  ESLAASAKVLAYES-AEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVA
        E +    K+ + E   +  + +G  ++HK +GY  V+ G DP C     W+    V  L  G +QPFY VLV+     D    Y A+ENL    EP  ++
Subjt:  ESLAASAKVLAYES-AEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVA

Query:  ERFDHPYNSFLFYGVDTAGDFIPIKQLREKY
            HP +   ++   T   +IP  +L  +Y
Subjt:  ERFDHPYNSFLFYGVDTAGDFIPIKQLREKY

Arabidopsis top hitse value%identityAlignment
AT2G03390.1 uvrB/uvrC motif-containing protein1.7e-9959.4Show/hide
Query:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTSPCRSKRGNFKINAGWLFKGGGQE-LGARIERSENANNDILIF
        MVQ  S+  LT  G  KV  S+L  +      K +SL       C + +   SF        +R   ++ A W F+GGG++ L    ERSE+AN DILIF
Subjt:  MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTSPCRSKRGNFKINAGWLFKGGGQE-LGARIERSENANNDILIF

Query:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAG-----------------------------FADLQKAVESENYALAAQLRDEISKLETESLAASAKVL
        FFQLDLATRVQYA+N+EQY+IAQ+LR KLTE                                ADLQ A++SE+Y LAA+LRDEISKLE ESLA SAK L
Subjt:  FFQLDLATRVQYALNIEQYEIAQELRTKLTEAG-----------------------------FADLQKAVESENYALAAQLRDEISKLETESLAASAKVL

Query:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL
        A+E AEY+FRLGQK+RHK FGYR VVCGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYVAE+NLL PE+PD   ERFDHPY SFL
Subjt:  AYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFL

Query:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQDDE
        +YG DTAGDFIP+KQLREKYNRPRHE+PFD QD++
Subjt:  FYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQDDE

AT2G03390.2 uvrB/uvrC motif-containing protein2.6e-7967.57Show/hide
Query:  LNIEQYEIAQELRTKLTEAG-----------------------------FADLQKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQ
        +N+EQY+IAQ+LR KLTE                                ADLQ A++SE+Y LAA+LRDEISKLE ESLA SAK LA+E AEY+FRLGQ
Subjt:  LNIEQYEIAQELRTKLTEAG-----------------------------FADLQKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQ

Query:  KVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFLFYGVDTAGDFIPI
        K+RHK FGYR VVCGMDP+C ESSSWME A+VEKL RGSNQPFYQVLVDVRT PDLLVAYVAE+NLL PE+PD   ERFDHPY SFL+YG DTAGDFIP+
Subjt:  KVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSRGSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFLFYGVDTAGDFIPI

Query:  KQLREKYNRPRHEIPFDPQDDE
        KQLREKYNRPRHE+PFD QD++
Subjt:  KQLREKYNRPRHEIPFDPQDDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCAGGATTTATCAATACACGCTCTGACAGCCTTGGGAGATCCGAAGGTTTACGGATCAGCTCTTTCATGGAAGAGGAATTTCAAGCATTTCAAGCAGACAAGTCT
AACCCAATTAACTTTCAGGCAATGCTTTTGGCATCAATCCATGCGAAGCTTTTCCTTAACTAGCCCCTGTAGATCAAAACGAGGAAATTTTAAGATTAATGCTGGATGGT
TGTTTAAAGGGGGTGGACAAGAGTTGGGTGCTCGTATAGAGCGCAGTGAAAATGCTAACAATGATATTTTAATCTTCTTTTTCCAGCTGGACCTGGCAACACGAGTACAG
TATGCATTGAACATTGAGCAGTATGAAATTGCACAAGAATTGAGAACGAAGCTAACCGAGGCAGGCTTCGCAGATTTGCAGAAGGCTGTTGAAAGTGAAAACTATGCTTT
GGCTGCACAACTGCGGGATGAAATTTCCAAACTGGAAACTGAGTCCCTTGCTGCATCCGCAAAAGTTCTGGCTTACGAGAGTGCTGAATATAGTTTTAGATTGGGACAGA
AAGTGAGGCACAAAAATTTTGGATACAGAGGTGTGGTTTGTGGAATGGATCCTGTGTGCTGTGAATCAAGTTCTTGGATGGAGATAGCACAAGTTGAAAAATTATCTCGA
GGTTCTAATCAGCCATTCTATCAGGTTTTAGTGGATGTTCGTACAGACCCAGATTTGCTGGTTGCATATGTTGCCGAGGAAAATCTTCTTGTTCCCGAAGAACCAGATAC
GGTGGCTGAGAGGTTTGATCATCCGTATAATTCTTTCTTATTCTATGGAGTGGATACAGCCGGGGATTTCATTCCTATAAAGCAACTGCGGGAGAAGTACAATCGGCCTC
GACATGAAATTCCTTTTGATCCTCAAGATGATGAGCAACGCGGTGATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCAGGATTTATCAATACACGCTCTGACAGCCTTGGGAGATCCGAAGGTTTACGGATCAGCTCTTTCATGGAAGAGGAATTTCAAGCATTTCAAGCAGACAAGTCT
AACCCAATTAACTTTCAGGCAATGCTTTTGGCATCAATCCATGCGAAGCTTTTCCTTAACTAGCCCCTGTAGATCAAAACGAGGAAATTTTAAGATTAATGCTGGATGGT
TGTTTAAAGGGGGTGGACAAGAGTTGGGTGCTCGTATAGAGCGCAGTGAAAATGCTAACAATGATATTTTAATCTTCTTTTTCCAGCTGGACCTGGCAACACGAGTACAG
TATGCATTGAACATTGAGCAGTATGAAATTGCACAAGAATTGAGAACGAAGCTAACCGAGGCAGGCTTCGCAGATTTGCAGAAGGCTGTTGAAAGTGAAAACTATGCTTT
GGCTGCACAACTGCGGGATGAAATTTCCAAACTGGAAACTGAGTCCCTTGCTGCATCCGCAAAAGTTCTGGCTTACGAGAGTGCTGAATATAGTTTTAGATTGGGACAGA
AAGTGAGGCACAAAAATTTTGGATACAGAGGTGTGGTTTGTGGAATGGATCCTGTGTGCTGTGAATCAAGTTCTTGGATGGAGATAGCACAAGTTGAAAAATTATCTCGA
GGTTCTAATCAGCCATTCTATCAGGTTTTAGTGGATGTTCGTACAGACCCAGATTTGCTGGTTGCATATGTTGCCGAGGAAAATCTTCTTGTTCCCGAAGAACCAGATAC
GGTGGCTGAGAGGTTTGATCATCCGTATAATTCTTTCTTATTCTATGGAGTGGATACAGCCGGGGATTTCATTCCTATAAAGCAACTGCGGGAGAAGTACAATCGGCCTC
GACATGAAATTCCTTTTGATCCTCAAGATGATGAGCAACGCGGTGATGATTGA
Protein sequenceShow/hide protein sequence
MVQDLSIHALTALGDPKVYGSALSWKRNFKHFKQTSLTQLTFRQCFWHQSMRSFSLTSPCRSKRGNFKINAGWLFKGGGQELGARIERSENANNDILIFFFQLDLATRVQ
YALNIEQYEIAQELRTKLTEAGFADLQKAVESENYALAAQLRDEISKLETESLAASAKVLAYESAEYSFRLGQKVRHKNFGYRGVVCGMDPVCCESSSWMEIAQVEKLSR
GSNQPFYQVLVDVRTDPDLLVAYVAEENLLVPEEPDTVAERFDHPYNSFLFYGVDTAGDFIPIKQLREKYNRPRHEIPFDPQDDEQRGDD