; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004378 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004378
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncytochrome b5
Genome locationChr08:16433988..16436807
RNA-Seq ExpressionHG10004378
SyntenyHG10004378
Gene Ontology termsGO:0009707 - chloroplast outer membrane (cellular component)
GO:0010319 - stromule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001199 - Cytochrome b5-like heme/steroid binding domain
IPR018506 - Cytochrome b5, heme-binding site
IPR036400 - Cytochrome b5-like heme/steroid binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598642.1 Cytochrome b5 isoform A, partial [Cucurbita argyrosperma subsp. sororia]7.4e-5787.79Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA
        MPSISALYSI+EVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDD+IVAATGRDATDDFEDAGHSKDARELMEKFYIG LD SSS   ELET + DGYAA
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA

Query:  RVQALTKQYWKAPVAVLGISVVLGCLYLRKK
        RVQ LTKQYW  P+AVLGISVVLG LYL KK
Subjt:  RVQALTKQYWKAPVAVLGISVVLGCLYLRKK

XP_004144166.1 cytochrome b5 [Cucumis sativus]3.4e-6293.13Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA
        MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDD+IVAATGRDATDDFEDAGHSKDARELMEKFYIG+LDTSS DSL+LETNQVDGYA 
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA

Query:  RVQALTKQYWKAPVAVLGISVVLGCLYLRKK
        RVQ LTKQYWKAPVAV+GISVVLG  YLRKK
Subjt:  RVQALTKQYWKAPVAVLGISVVLGCLYLRKK

XP_008445442.1 PREDICTED: cytochrome b5 [Cucumis melo]3.8e-6191.6Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA
        MPSISALYSIQEVSQHSS+DDCWIIIDGKVYDLTSYLDEHPGGDDIIV ATGRDATDDFEDAGHSKDARELMEKFYIG+LDTSSSDSL+LETNQVD YA 
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA

Query:  RVQALTKQYWKAPVAVLGISVVLGCLYLRKK
        RVQ LTKQYWKAPVAV+GIS+VLG +YLRKK
Subjt:  RVQALTKQYWKAPVAVLGISVVLGCLYLRKK

XP_022961879.1 cytochrome b5 [Cucurbita moschata]3.7e-5687.02Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA
        MPSISALYSI+EVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDD+IVAATGRDATDDFEDAGHSKDARELMEKFYIG LD SSS   ELE  + DGYAA
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA

Query:  RVQALTKQYWKAPVAVLGISVVLGCLYLRKK
        RVQ LTKQYW  P+AVLGISVVLG LYL KK
Subjt:  RVQALTKQYWKAPVAVLGISVVLGCLYLRKK

XP_038884358.1 cytochrome b5 [Benincasa hispida]1.3e-6496.18Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA
        MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDD+IVAATGRDATDDFEDAGHSKDARELMEKFYIG+LDTSSSDSL+LET+QVDGYAA
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA

Query:  RVQALTKQYWKAPVAVLGISVVLGCLYLRKK
        RVQA TKQYWKAPVAVLGISVVLGCLYLRKK
Subjt:  RVQALTKQYWKAPVAVLGISVVLGCLYLRKK

TrEMBL top hitse value%identityAlignment
A0A0A0KIR1 Cytochrome b5 heme-binding domain-containing protein1.7e-6293.13Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA
        MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDD+IVAATGRDATDDFEDAGHSKDARELMEKFYIG+LDTSS DSL+LETNQVDGYA 
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA

Query:  RVQALTKQYWKAPVAVLGISVVLGCLYLRKK
        RVQ LTKQYWKAPVAV+GISVVLG  YLRKK
Subjt:  RVQALTKQYWKAPVAVLGISVVLGCLYLRKK

A0A1S3BCR4 cytochrome b51.8e-6191.6Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA
        MPSISALYSIQEVSQHSS+DDCWIIIDGKVYDLTSYLDEHPGGDDIIV ATGRDATDDFEDAGHSKDARELMEKFYIG+LDTSSSDSL+LETNQVD YA 
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA

Query:  RVQALTKQYWKAPVAVLGISVVLGCLYLRKK
        RVQ LTKQYWKAPVAV+GIS+VLG +YLRKK
Subjt:  RVQALTKQYWKAPVAVLGISVVLGCLYLRKK

A0A5A7V8T8 Cytochrome b53.4e-5592.37Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA
        MPSISALYSIQEVSQHSS+DDCWIIIDGKVYDLTSYLDEHPGGDDIIV ATGRDATDDFEDAGHSKDARELMEKFYIG+LDTSSSDSL+LETNQVD YA 
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA

Query:  RVQALTKQYWKAPVAVLG
         VQ LTKQYWKAPVAV+G
Subjt:  RVQALTKQYWKAPVAVLG

A0A6J1HFA7 cytochrome b51.8e-5687.02Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA
        MPSISALYSI+EVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDD+IVAATGRDATDDFEDAGHSKDARELMEKFYIG LD SSS   ELE  + DGYAA
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA

Query:  RVQALTKQYWKAPVAVLGISVVLGCLYLRKK
        RVQ LTKQYW  P+AVLGISVVLG LYL KK
Subjt:  RVQALTKQYWKAPVAVLGISVVLGCLYLRKK

A0A6J1KB15 cytochrome b52.8e-5482.44Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA
        MPSISALYSI+E+S+HSSNDDCWIIIDGKVYDLTSYLDEHPGGDD+I+AATGRDATDDFEDAGHSKD RELM+KFYIG LD SSS    LET + DGYAA
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA

Query:  RVQALTKQYWKAPVAVLGISVVLGCLYLRKK
        +VQ LTKQYW  P+AVLGISVVLG LYL KK
Subjt:  RVQALTKQYWKAPVAVLGISVVLGCLYLRKK

SwissProt top hitse value%identityAlignment
O48845 Cytochrome b5 isoform B3.0e-2453.85Show/hide
Query:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSS
        ++++ EVS+H+   DCWI+I+GKVY++T +L++HPGGDD+++++TG+DATDDFED GHS+ ARE+ME++Y+G +D ++
Subjt:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSS

P40934 Cytochrome b51.3e-2441.04Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA
        M S   +   +EVSQH+   DCW+II GKVYD+T ++D+HPGGD++++++TG+DAT+DFED GHS  AR++MEK+YIG +D+S+  +          Y A
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA

Query:  RVQALTKQ-----------YWKAPVAVLGISVVL
         VQ    Q            +  P+ +LG+++V+
Subjt:  RVQALTKQ-----------YWKAPVAVLGISVVL

P49100 Cytochrome b51.3e-2455.13Show/hide
Query:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSS
        +Y+++EV++H+S DDCW+II GKVY+++ +L++HPGGDD+++++TG+DATDDFED GHS  AR +M+++Y+G +DTS+
Subjt:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSS

Q9FDW8 Cytochrome b5 isoform A1.6e-3856.72Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSL-ELETNQVDGYA
        MP+++ LYS++E + H+  DDCW++IDGKVYD++SY+DEHPGGDD+++A  G+DATDDFEDAGHSKDARELMEK++IG LD SS   + EL+  + D   
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSL-ELETNQVDGYA

Query:  ARVQA---LTKQYWKAPVAVLGISVVLGCLYLRK
          VQ    LTKQYW  PV+++ ISV +  L+ RK
Subjt:  ARVQA---LTKQYWKAPVAVLGISVVLGCLYLRK

Q9ZWT2 Cytochrome B5 isoform D3.5e-2557.69Show/hide
Query:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSS
        ++++ EVSQHSS  DCWI+IDGKVYD+T +LD+HPGGD++I+ +TG+DATDDFED GHS  A+ +++++Y+G +DT++
Subjt:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSS

Arabidopsis top hitse value%identityAlignment
AT1G26340.1 cytochrome B5 isoform A1.1e-3956.72Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSL-ELETNQVDGYA
        MP+++ LYS++E + H+  DDCW++IDGKVYD++SY+DEHPGGDD+++A  G+DATDDFEDAGHSKDARELMEK++IG LD SS   + EL+  + D   
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSL-ELETNQVDGYA

Query:  ARVQA---LTKQYWKAPVAVLGISVVLGCLYLRK
          VQ    LTKQYW  PV+++ ISV +  L+ RK
Subjt:  ARVQA---LTKQYWKAPVAVLGISVVLGCLYLRK

AT2G32720.1 cytochrome B5 isoform B2.1e-2553.85Show/hide
Query:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSS
        ++++ EVS+H+   DCWI+I+GKVY++T +L++HPGGDD+++++TG+DATDDFED GHS+ ARE+ME++Y+G +D ++
Subjt:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSS

AT2G46650.1 cytochrome B5 isoform C5.7e-2355.13Show/hide
Query:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSS
        L S  +V++H   +DCWI+I GKVYD+++++DEHPGGD++++A TG+DA+ DFED  HSKDA+ELM+K+ IG +D S+
Subjt:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSS

AT5G48810.1 cytochrome B5 isoform D2.5e-2657.69Show/hide
Query:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSS
        ++++ EVSQHSS  DCWI+IDGKVYD+T +LD+HPGGD++I+ +TG+DATDDFED GHS  A+ +++++Y+G +DT++
Subjt:  LYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSS

AT5G53560.1 cytochrome B5 isoform E4.7e-2541.09Show/hide
Query:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA
        M S   + S +EVS+H+   DCW+II GKVYD+T ++D+HPGGD++++++TG+DAT+DFED GHS  AR++M+K++IG +D+SS  +    T       A
Subjt:  MPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDFEDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAA

Query:  RVQALTKQY------WKAPVAVLGISVVL
          Q  T ++      +  P+ +LG+++V+
Subjt:  RVQALTKQY------WKAPVAVLGISVVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAAACAATCCAAATACAACAAGAAAATGCTTGCAATGGTGGTTGTTGGCGGCAGCGGGCAACAACTATGGAAAGTGAAGGTAGTTCGAACCAACCCGCGG
CGGCGATTAGTCGACCAATCGCCGAAGGGATCGATGCCGAGCATTTCGGCCCTCTATTCCATTCAAGAAGTCTCACAGCACAGTTCCAACGATGATTGTTGGATC
ATTATCGATGGCAAGGTATACGATTTGACTTCATATTTGGATGAGCATCCCGGTGGAGATGACATTATTGTGGCTGCAACTGGCAGAGATGCCACAGATGATTTT
GAAGATGCCGGTCATAGCAAAGATGCCAGAGAGTTGATGGAGAAGTTCTATATCGGCGTGCTTGATACATCTTCCTCGGATAGCCTAGAACTTGAAACGAATCAA
GTAGACGGTTATGCAGCTCGGGTTCAGGCCTTGACAAAGCAATACTGGAAGGCTCCTGTTGCAGTACTTGGTATTTCTGTGGTACTTGGCTGTCTATACTTGCGC
AAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACAAACAATCCAAATACAACAAGAAAATGCTTGCAATGGTGGTTGTTGGCGGCAGCGGGCAACAACTATGGAAAGTGAAGGTAGTTCGAACCAACCCGCGG
CGGCGATTAGTCGACCAATCGCCGAAGGGATCGATGCCGAGCATTTCGGCCCTCTATTCCATTCAAGAAGTCTCACAGCACAGTTCCAACGATGATTGTTGGATC
ATTATCGATGGCAAGGTATACGATTTGACTTCATATTTGGATGAGCATCCCGGTGGAGATGACATTATTGTGGCTGCAACTGGCAGAGATGCCACAGATGATTTT
GAAGATGCCGGTCATAGCAAAGATGCCAGAGAGTTGATGGAGAAGTTCTATATCGGCGTGCTTGATACATCTTCCTCGGATAGCCTAGAACTTGAAACGAATCAA
GTAGACGGTTATGCAGCTCGGGTTCAGGCCTTGACAAAGCAATACTGGAAGGCTCCTGTTGCAGTACTTGGTATTTCTGTGGTACTTGGCTGTCTATACTTGCGC
AAAAAGTGA
Protein sequenceShow/hide protein sequence
MHKQSKYNKKMLAMVVVGGSGQQLWKVKVVRTNPRRRLVDQSPKGSMPSISALYSIQEVSQHSSNDDCWIIIDGKVYDLTSYLDEHPGGDDIIVAATGRDATDDF
EDAGHSKDARELMEKFYIGVLDTSSSDSLELETNQVDGYAARVQALTKQYWKAPVAVLGISVVLGCLYLRKK