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HG10004404 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004404
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionThioredoxin
Genome locationChr08:16660895..16663332
RNA-Seq ExpressionHG10004404
SyntenyHG10004404
Gene Ontology termsGO:0009657 - plastid organization (biological process)
GO:0045454 - cell redox homeostasis (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0015035 - protein disulfide oxidoreductase activity (molecular function)
InterPro domainsIPR013766 - Thioredoxin domain
IPR036249 - Thioredoxin-like superfamily
IPR044182 - Thioredoxin-like protein CITRX, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY19739.1 Thioredoxin z, P,TRX z isoform 2 [Theobroma cacao]1.2e-3288.31Show/hide
Query:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEMVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM
        M++ EV+ELV+GER+VP+IIDFYATWCGPCILMAQELEMVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDI+D EM
Subjt:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEMVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM

KAA0064789.1 thioredoxin-like protein CITRX [Cucumis melo var. makuwa]5.2e-3172.12Show/hide
Query:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII
        MT+AEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM                           VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII
Subjt:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII

Query:  DKEM
        D EM
Subjt:  DKEM

XP_004146769.1 thioredoxin-like protein CITRX, chloroplastic [Cucumis sativus]3.0e-3172.12Show/hide
Query:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII
        MT+AEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM                           VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII
Subjt:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII

Query:  DKEM
        D+EM
Subjt:  DKEM

XP_022131323.1 thioredoxin-like protein CITRX, chloroplastic [Momordica charantia]5.2e-3172.12Show/hide
Query:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII
        MT+AEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM                           VRGLPTLFFISPDP+KEAIRTEGLIPIQMMRDII
Subjt:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII

Query:  DKEM
        DKEM
Subjt:  DKEM

XP_038884365.1 thioredoxin-like protein CITRX, chloroplastic [Benincasa hispida]1.4e-3173.08Show/hide
Query:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII
        MT+AEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM                           VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII
Subjt:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII

Query:  DKEM
        DKEM
Subjt:  DKEM

TrEMBL top hitse value%identityAlignment
A0A061FY75 Thioredoxin z, P,TRX z isoform 26.0e-3388.31Show/hide
Query:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEMVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM
        M++ EV+ELV+GER+VP+IIDFYATWCGPCILMAQELEMVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDI+D EM
Subjt:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEMVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM

A0A0A0KH97 Thioredoxin domain-containing protein1.5e-3172.12Show/hide
Query:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII
        MT+AEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM                           VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII
Subjt:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII

Query:  DKEM
        D+EM
Subjt:  DKEM

A0A1S3BCN5 thioredoxin-like protein CITRX, chloroplastic2.1e-3071.15Show/hide
Query:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII
        MT+AEVQELVK ERNVPLIIDFYATWCGPCILMAQELEM                           VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII
Subjt:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII

Query:  DKEM
        D EM
Subjt:  DKEM

A0A5A7VH45 Thioredoxin-like protein CITRX2.5e-3172.12Show/hide
Query:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII
        MT+AEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM                           VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII
Subjt:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII

Query:  DKEM
        D EM
Subjt:  DKEM

A0A6J1BT12 thioredoxin-like protein CITRX, chloroplastic2.5e-3172.12Show/hide
Query:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII
        MT+AEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM                           VRGLPTLFFISPDP+KEAIRTEGLIPIQMMRDII
Subjt:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII

Query:  DKEM
        DKEM
Subjt:  DKEM

SwissProt top hitse value%identityAlignment
M1A3D5 Thioredoxin-like protein CITRX, chloroplastic8.6e-2960.58Show/hide
Query:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII
        +++ E+QEL+KGERNVPLIIDFYATWCGPCILMAQELEM                           VRGLPTL+FISPD +K+AIRTEGLIPIQMMRDII
Subjt:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII

Query:  DKEM
        + ++
Subjt:  DKEM

Q6JE37 Thioredoxin-like protein CITRX2, chloroplastic7.8e-3061.54Show/hide
Query:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII
        +++ ++QEL+KGERNVPLIIDFYATWCGPCILMAQELEM                           VRGLPTL+FISPDPNK+AIRTEGLIPIQMMRDII
Subjt:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII

Query:  DKEM
        + ++
Subjt:  DKEM

Q6JE38 Thioredoxin-like protein CITRX1, chloroplastic7.8e-3061.54Show/hide
Query:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII
        +++ ++QEL+KGERNVPLIIDFYATWCGPCILMAQELEM                           VRGLPTL+FISPDPNK+AIRTEGLIPIQMMRDII
Subjt:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII

Query:  DKEM
        + ++
Subjt:  DKEM

Q9LKW0 Thioredoxin-like protein CITRX, chloroplastic2.3e-2961.54Show/hide
Query:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII
        +++ E+QEL+KGERNVPLIIDFYATWCGPCILMAQELEM                           VRGLPTL+FISPD +K+AIRTEGLIPIQMMRDII
Subjt:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII

Query:  DKEM
        D ++
Subjt:  DKEM

Q9M7X9 Thioredoxin-like protein CITRX, chloroplastic3.0e-2961.54Show/hide
Query:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII
        +++ E+QELVKG+R VPLI+DFYATWCGPCILMAQELEM                           VRGLPTLFFISPDP+K+AIRTEGLIP+QMM DII
Subjt:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII

Query:  DKEM
        D EM
Subjt:  DKEM

Arabidopsis top hitse value%identityAlignment
AT1G43560.1 thioredoxin Y27.5e-0462.5Show/hide
Query:  PLIIDFYATWCGPCILMAQELEMV
        P+++DFYATWCGPC LM   L  V
Subjt:  PLIIDFYATWCGPCILMAQELEMV

AT3G06730.1 Thioredoxin z2.1e-3061.54Show/hide
Query:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII
        +++ E+QELVKG+R VPLI+DFYATWCGPCILMAQELEM                           VRGLPTLFFISPDP+K+AIRTEGLIP+QMM DII
Subjt:  MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEM---------------------------VRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDII

Query:  DKEM
        D EM
Subjt:  DKEM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATCTGCCGAAGTGCAGGAGTTGGTGAAGGGGGAAAGAAATGTGCCGCTTATAATTGATTTTTATGCAACATGGTGTGGACCCTGCATTCTAATGGCTCAA
GAACTTGAAATGGTGAGAGGACTGCCTACACTTTTCTTCATTAGCCCGGATCCAAATAAAGAAGCTATCCGCACCGAAGGTCTCATTCCAATTCAGATGATGCGA
GATATCATCGATAAAGAGATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACATCTGCCGAAGTGCAGGAGTTGGTGAAGGGGGAAAGAAATGTGCCGCTTATAATTGATTTTTATGCAACATGGTGTGGACCCTGCATTCTAATGGCTCAA
GAACTTGAAATGGTGAGAGGACTGCCTACACTTTTCTTCATTAGCCCGGATCCAAATAAAGAAGCTATCCGCACCGAAGGTCTCATTCCAATTCAGATGATGCGA
GATATCATCGATAAAGAGATGTGA
Protein sequenceShow/hide protein sequence
MTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEMVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM