; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004426 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004426
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionATP synthase subunit alpha
Genome locationChr08:16946590..16946826
RNA-Seq ExpressionHG10004426
SyntenyHG10004426
Gene Ontology termsGO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB60481.1 hypothetical protein L484_014936 [Morus notabilis]8.7e-1065.57Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKKI-SCAETIGCMHLELLGVHRKARDLGFHFMRPFPAA
        MSER + FLSSIGLLGEYCPTSRKK  S A+ +GCMHL L+    K   LG+ FMRPFP A
Subjt:  MSERASLFLSSIGLLGEYCPTSRKKI-SCAETIGCMHLELLGVHRKARDLGFHFMRPFPAA

KAA0064818.1 ATP synthase subunit alpha [Cucumis melo var. makuwa]6.9e-3192.31Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKKISCAETIGCMHLELLGVHRKARDLGFHFMRPFPAAQRAFGPFEDTATAATYLF
        MSERASLFLSSIGLLGEYCPTSRKKISCAETIGCMHLELLGVHRKAR LGFHFMR FPAAQRA G FEDTAT +TYLF
Subjt:  MSERASLFLSSIGLLGEYCPTSRKKISCAETIGCMHLELLGVHRKARDLGFHFMRPFPAAQRAFGPFEDTATAATYLF

KAG6585281.1 Eukaryotic translation initiation factor 5, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1290.7Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKKISCAETIGCMHLELLGVH
        MSERA+LFLSSIGLLGEYCPTSRKK SCAETIGCMHLEL G H
Subjt:  MSERASLFLSSIGLLGEYCPTSRKKISCAETIGCMHLELLGVH

KAG7020201.1 Eukaryotic translation initiation factor 5, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-1380.39Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKKISCAETIGCMHLELLGVHRKA-RDLG
        MSERA+LFLSSIGLLGEYCPTSRKK SCAETIGCMHLEL G H  + R++G
Subjt:  MSERASLFLSSIGLLGEYCPTSRKKISCAETIGCMHLELLGVHRKA-RDLG

PPD71333.1 hypothetical protein GOBAR_DD31780 [Gossypium barbadense]3.3e-0961.9Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKK-ISCAETIGCMHLELLGVHRKARDLGFHFMRPFPAAQR
        MSERASLFLSSIGLLGEYCPTSRKK  S    I CMH+E      +   LGF FM+  P+A+R
Subjt:  MSERASLFLSSIGLLGEYCPTSRKK-ISCAETIGCMHLELLGVHRKARDLGFHFMRPFPAAQR

TrEMBL top hitse value%identityAlignment
A0A5A7VB37 ATP synthase subunit alpha3.3e-3192.31Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKKISCAETIGCMHLELLGVHRKARDLGFHFMRPFPAAQRAFGPFEDTATAATYLF
        MSERASLFLSSIGLLGEYCPTSRKKISCAETIGCMHLELLGVHRKAR LGFHFMR FPAAQRA G FEDTAT +TYLF
Subjt:  MSERASLFLSSIGLLGEYCPTSRKKISCAETIGCMHLELLGVHRKARDLGFHFMRPFPAAQRAFGPFEDTATAATYLF

A0A5D2L037 Uncharacterized protein1.6e-0960.61Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKK-ISCAETIGCMHLELLGVHRKARDLGFHFMRPFPAAQRAFG
        MSERASLFLSSIGLLGEYCPTSRKK  S    I CMH+E      +   LGF FM+  P+A+R  G
Subjt:  MSERASLFLSSIGLLGEYCPTSRKK-ISCAETIGCMHLELLGVHRKARDLGFHFMRPFPAAQRAFG

A0A7J8XXW1 W2 domain-containing protein1.6e-0961.9Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKK-ISCAETIGCMHLELLGVHRKARDLGFHFMRPFPAAQR
        MSERASLFLSSIGLLGEYCPTSRKK  S    I CMH+E      +   LGF FM+  P+A+R
Subjt:  MSERASLFLSSIGLLGEYCPTSRKK-ISCAETIGCMHLELLGVHRKARDLGFHFMRPFPAAQR

A0A7J9HFE2 W2 domain-containing protein1.6e-0961.9Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKK-ISCAETIGCMHLELLGVHRKARDLGFHFMRPFPAAQR
        MSERASLFLSSIGLLGEYCPTSRKK  S    I CMH+E      +   LGF FM+  P+A+R
Subjt:  MSERASLFLSSIGLLGEYCPTSRKK-ISCAETIGCMHLELLGVHRKARDLGFHFMRPFPAAQR

W9QZ52 Uncharacterized protein4.2e-1065.57Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKKI-SCAETIGCMHLELLGVHRKARDLGFHFMRPFPAA
        MSER + FLSSIGLLGEYCPTSRKK  S A+ +GCMHL L+    K   LG+ FMRPFP A
Subjt:  MSERASLFLSSIGLLGEYCPTSRKKI-SCAETIGCMHLELLGVHRKARDLGFHFMRPFPAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G36732.1 conserved peptide upstream open reading frame 196.9e-0584Show/hide
Query:  MSERASLFLSSIGLLGEYCPTSRKK
        MSE+ASLF SSI LLGEYCP SRKK
Subjt:  MSERASLFLSSIGLLGEYCPTSRKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAACGGGCCTCTCTCTTTTTGTCATCGATTGGATTGCTTGGAGAGTATTGTCCTACGTCTAGGAAAAAGATCAGTTGTGCTGAGACTATTGGCTGCATGCATCT
TGAGTTGCTCGGAGTTCATAGAAAAGCACGTGATCTTGGTTTCCATTTTATGCGGCCTTTCCCAGCTGCTCAAAGAGCGTTTGGACCTTTTGAAGATACTGCTACGGCTG
CTACCTATCTTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGAACGGGCCTCTCTCTTTTTGTCATCGATTGGATTGCTTGGAGAGTATTGTCCTACGTCTAGGAAAAAGATCAGTTGTGCTGAGACTATTGGCTGCATGCATCT
TGAGTTGCTCGGAGTTCATAGAAAAGCACGTGATCTTGGTTTCCATTTTATGCGGCCTTTCCCAGCTGCTCAAAGAGCGTTTGGACCTTTTGAAGATACTGCTACGGCTG
CTACCTATCTTTTCTAA
Protein sequenceShow/hide protein sequence
MSERASLFLSSIGLLGEYCPTSRKKISCAETIGCMHLELLGVHRKARDLGFHFMRPFPAAQRAFGPFEDTATAATYLF