; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004487 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004487
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionB-like cyclin
Genome locationChr08:17562256..17562819
RNA-Seq ExpressionHG10004487
SyntenyHG10004487
Gene Ontology termsGO:0007049 - cell cycle (biological process)
GO:0051301 - cell division (biological process)
InterPro domainsIPR004367 - Cyclin, C-terminal domain
IPR039361 - Cyclin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152610.1 cyclin-D4-1 [Cucumis sativus]1.8e-5595.9Show/hide
Query:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCANS
        GIDFLEFKPSEIAAAVAISVA EAQSVDPERAIPLLIQQLQMERV+KCLKLIN MLICGGG++KDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCANS
Subjt:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCANS

Query:  SHHNSSEATKRRRLNRPCEVEL
        SHHNSSEATKRRRLNRPCEVEL
Subjt:  SHHNSSEATKRRRLNRPCEVEL

XP_008444892.1 PREDICTED: cyclin-D4-1-like [Cucumis melo]2.8e-5696.72Show/hide
Query:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCANS
        GIDFLEFKPSEIAAAVAISVA EAQSVDPERAIPLLIQQLQMERV+KCLKLINDMLICGGG++KDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCANS
Subjt:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCANS

Query:  SHHNSSEATKRRRLNRPCEVEL
        SHHNSSEATKRRRLNRPCEVEL
Subjt:  SHHNSSEATKRRRLNRPCEVEL

XP_022132304.1 cyclin-D4-1-like [Momordica charantia]1.4e-4787.8Show/hide
Query:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCAN-
        GIDFLEFKPSEIAAAVAISVA EAQ VDPE+AIPLLIQQLQMERVLKC+KLIN    CG G+ KDSR SMSEPRSPSGVLDVTCLSYKSNDTAVGSCAN 
Subjt:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCAN-

Query:  SSHHNSSEATKRRRLNRPCEVEL
        SSHHNSS+A KRRRLNRPCEVEL
Subjt:  SSHHNSSEATKRRRLNRPCEVEL

XP_023546810.1 cyclin-D2-1-like isoform X2 [Cucurbita pepo subsp. pepo]2.9e-4080.99Show/hide
Query:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSM-SEPRSPSGVLDVTCLSYKSNDTAVGSCAN
        GI+FLEFKPSEIAAAVAISVA EAQSVDP+RAI LLIQQLQMERVLKCLKLI+DM +C GG+ K SR SM SE RSPSGVL+VTCLSY SNDTAVGSCAN
Subjt:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSM-SEPRSPSGVLDVTCLSYKSNDTAVGSCAN

Query:  SSHHNSSEATKRRRLNRPCEV
              S+ATKRRRLNRPCEV
Subjt:  SSHHNSSEATKRRRLNRPCEV

XP_038886634.1 cyclin-D4-1-like [Benincasa hispida]1.5e-5293.5Show/hide
Query:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDM-LICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCAN
        GIDFLEFKPSEIAAAVAISV+ EAQSVDPERAIPLLIQQLQMERVLKCLKLINDM LIC GGTVKDSRV ++EPRSPSGVLDVTCLSYKSNDTAVGSCAN
Subjt:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDM-LICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCAN

Query:  SSHHNSSEATKRRRLNRPCEVEL
        SSHHNS EATKRRRLNRPCEVEL
Subjt:  SSHHNSSEATKRRRLNRPCEVEL

TrEMBL top hitse value%identityAlignment
A0A0A0LLB4 B-like cyclin8.9e-5695.9Show/hide
Query:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCANS
        GIDFLEFKPSEIAAAVAISVA EAQSVDPERAIPLLIQQLQMERV+KCLKLIN MLICGGG++KDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCANS
Subjt:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCANS

Query:  SHHNSSEATKRRRLNRPCEVEL
        SHHNSSEATKRRRLNRPCEVEL
Subjt:  SHHNSSEATKRRRLNRPCEVEL

A0A1S3BBF1 B-like cyclin1.4e-5696.72Show/hide
Query:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCANS
        GIDFLEFKPSEIAAAVAISVA EAQSVDPERAIPLLIQQLQMERV+KCLKLINDMLICGGG++KDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCANS
Subjt:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCANS

Query:  SHHNSSEATKRRRLNRPCEVEL
        SHHNSSEATKRRRLNRPCEVEL
Subjt:  SHHNSSEATKRRRLNRPCEVEL

A0A5A7VH95 B-like cyclin1.4e-5696.72Show/hide
Query:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCANS
        GIDFLEFKPSEIAAAVAISVA EAQSVDPERAIPLLIQQLQMERV+KCLKLINDMLICGGG++KDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCANS
Subjt:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCANS

Query:  SHHNSSEATKRRRLNRPCEVEL
        SHHNSSEATKRRRLNRPCEVEL
Subjt:  SHHNSSEATKRRRLNRPCEVEL

A0A6J1BSP6 B-like cyclin6.9e-4887.8Show/hide
Query:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCAN-
        GIDFLEFKPSEIAAAVAISVA EAQ VDPE+AIPLLIQQLQMERVLKC+KLIN    CG G+ KDSR SMSEPRSPSGVLDVTCLSYKSNDTAVGSCAN 
Subjt:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCAN-

Query:  SSHHNSSEATKRRRLNRPCEVEL
        SSHHNSS+A KRRRLNRPCEVEL
Subjt:  SSHHNSSEATKRRRLNRPCEVEL

A0A6J1HFI2 B-like cyclin3.4e-3979.34Show/hide
Query:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSM-SEPRSPSGVLDVTCLSYKSNDTAVGSCAN
        GI+FLEFKPSEIAAAVAISVA EAQSVDP+RAI LLIQQLQMERVLKCLKLI+D  +C GG+ K S  SM SE RSPSGVL+VTCLSY SNDTAVGSCAN
Subjt:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSM-SEPRSPSGVLDVTCLSYKSNDTAVGSCAN

Query:  SSHHNSSEATKRRRLNRPCEV
              S+ATKRRRLNRPCEV
Subjt:  SSHHNSSEATKRRRLNRPCEV

SwissProt top hitse value%identityAlignment
P42752 Cyclin-D2-11.4e-1339.84Show/hide
Query:  IDFLEFKPSEI--AAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSE--------PRSPSGVLDVTCLSYKSND
        I+FL+F+PSEI  AAAV++S++ E + +D E+A+  LI  ++ ERV +CL L+    + G   V+ + +S  +        P SP GVL+ TCLSY+S +
Subjt:  IDFLEFKPSEI--AAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSE--------PRSPSGVLDVTCLSYKSND

Query:  TAVGSCANSS------HHNSSEATKRRR
          V SC NSS      ++N++ + KRRR
Subjt:  TAVGSCANSS------HHNSSEATKRRR

Q4KYM5 Cyclin-D4-21.8e-0841.61Show/hide
Query:  AGIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLIND--MLICGGGTVKD----------SRVSMSEPRSPSGVLDVTCLSY
        AG  FLEF+PSEIAAAVA +VA EA  V  E  I      +   RVL+C + I D    +    TV+           S  S S P SP  VLD  CLSY
Subjt:  AGIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLIND--MLICGGGTVKD----------SRVSMSEPRSPSGVLDVTCLSY

Query:  KSNDTAVGSCAN------SSHHNSSEAT--KRRRLNR
        KS+DT   + A+       S  +SS  T  KRR+L+R
Subjt:  KSNDTAVGSCAN------SSHHNSSEAT--KRRRLNR

Q69QB8 Cyclin-D3-12.5e-1040.87Show/hide
Query:  DFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLD-VTCLSYKSNDTAVGSCANSS
        +FL F+PSEIAA+VA+ VA E         +    + L+ ERVL+C ++I D +I      + +    S P+SP GVLD   C+S +S DT VGS A  +
Subjt:  DFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLD-VTCLSYKSNDTAVGSCANSS

Query:  HHNSSEATKRRRLNR
        ++ SS ++KRRR+ R
Subjt:  HHNSSEATKRRRLNR

Q6YXH8 Cyclin-D4-13.9e-0839.52Show/hide
Query:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSR--VSMSEPRSPSGVLDVT-CLSYKSNDTAVGS-
        G + L F+PSEIAAAVA +V  E  +             +  ER+  C ++I  M +        SR  VS S PRSP+GVLD   CLSY+S+D+AV S 
Subjt:  GIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSR--VSMSEPRSPSGVLDVT-CLSYKSNDTAVGS-

Query:  -CANS---SHHNSSEATKRRRLNR
          A+S    H +S  ++KRR+++R
Subjt:  -CANS---SHHNSSEATKRRRLNR

Q8LHA8 Cyclin-D2-27.1e-1037.29Show/hide
Query:  FLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCANSSHH
        FL F+PSEIAAAV ++V  E Q +    A+      +  E V++C +L+ +  +     +++S  S S P SP  VLD  C S++S+DT +GS  ++S++
Subjt:  FLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVGSCANSSHH

Query:  ------NSSEATKRRRLN
              +S+ A+KRRRLN
Subjt:  ------NSSEATKRRRLN

Arabidopsis top hitse value%identityAlignment
AT2G22490.1 Cyclin D2;19.9e-1539.84Show/hide
Query:  IDFLEFKPSEI--AAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSE--------PRSPSGVLDVTCLSYKSND
        I+FL+F+PSEI  AAAV++S++ E + +D E+A+  LI  ++ ERV +CL L+    + G   V+ + +S  +        P SP GVL+ TCLSY+S +
Subjt:  IDFLEFKPSEI--AAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSE--------PRSPSGVLDVTCLSYKSND

Query:  TAVGSCANSS------HHNSSEATKRRR
          V SC NSS      ++N++ + KRRR
Subjt:  TAVGSCANSS------HHNSSEATKRRR

AT2G22490.2 Cyclin D2;16.8e-1640.62Show/hide
Query:  IDFLEFKPSEI--AAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSE--------PRSPSGVLDVTCLSYKSND
        I+FL+F+PSEI  AAAV++S++ E + +D E+A+  LI   Q ERV +CL L+    + G   V+ + +S  +        P SP GVL+ TCLSY+S +
Subjt:  IDFLEFKPSEI--AAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSE--------PRSPSGVLDVTCLSYKSND

Query:  TAVGSCANSS------HHNSSEATKRRR
          V SC NSS      ++N++ + KRRR
Subjt:  TAVGSCANSS------HHNSSEATKRRR

AT3G50070.1 CYCLIN D3;32.7e-0432.17Show/hide
Query:  FLEFKPSEIAAAVAISVAREAQSVDPE--RAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAV--GSCAN
        FL F PS +A A+ +SV R+ +  D    ++  + + ++  E+V KC +L+ D       + K     M +P SP GV D +  S  SN++ V   S + 
Subjt:  FLEFKPSEIAAAVAISVAREAQSVDPE--RAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAV--GSCAN

Query:  SSHHNSSEATKRRRL
        SS  +S    KRRR+
Subjt:  SSHHNSSEATKRRRL

AT5G65420.1 CYCLIN D4;13.4e-0740.62Show/hide
Query:  GIDFLEFKPSEIAAAVAISVAREAQSVD-PERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVT--CLSYKSNDTA
        GIDFLEF+PSE+AAAVA+SV+ E Q V     +   L   LQ ERV    K I +M+   G  +          ++P+GVL+V+  C S+K++D++
Subjt:  GIDFLEFKPSEIAAAVAISVAREAQSVD-PERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVT--CLSYKSNDTA

AT5G65420.3 CYCLIN D4;13.4e-0740.62Show/hide
Query:  GIDFLEFKPSEIAAAVAISVAREAQSVD-PERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVT--CLSYKSNDTA
        GIDFLEF+PSE+AAAVA+SV+ E Q V     +   L   LQ ERV    K I +M+   G  +          ++P+GVL+V+  C S+K++D++
Subjt:  GIDFLEFKPSEIAAAVAISVAREAQSVD-PERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVT--CLSYKSNDTA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTTGATTGATTTCGTTTCGGGTGGTTGGGAAATGAATGCAGGGATTGACTTCTTGGAATTCAAACCGTCTGAAATTGCAGCAGCTGTGGCAATATCAGTAGCTAG
GGAAGCTCAATCAGTGGACCCTGAGAGAGCAATTCCTCTTCTCATTCAGCAACTCCAAATGGAAAGAGTTCTGAAGTGTCTTAAATTAATCAATGACATGTTAATCTGTG
GTGGTGGGACGGTGAAGGACTCGAGAGTGTCGATGTCAGAGCCTCGGAGCCCAAGCGGGGTGTTGGACGTGACGTGTTTAAGCTATAAAAGCAATGATACAGCAGTTGGG
TCATGTGCAAACTCTTCTCATCATAACAGCTCAGAGGCTACAAAGAGGAGGAGACTGAACAGACCCTGTGAAGTGGAGCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGTTGATTGATTTCGTTTCGGGTGGTTGGGAAATGAATGCAGGGATTGACTTCTTGGAATTCAAACCGTCTGAAATTGCAGCAGCTGTGGCAATATCAGTAGCTAG
GGAAGCTCAATCAGTGGACCCTGAGAGAGCAATTCCTCTTCTCATTCAGCAACTCCAAATGGAAAGAGTTCTGAAGTGTCTTAAATTAATCAATGACATGTTAATCTGTG
GTGGTGGGACGGTGAAGGACTCGAGAGTGTCGATGTCAGAGCCTCGGAGCCCAAGCGGGGTGTTGGACGTGACGTGTTTAAGCTATAAAAGCAATGATACAGCAGTTGGG
TCATGTGCAAACTCTTCTCATCATAACAGCTCAGAGGCTACAAAGAGGAGGAGACTGAACAGACCCTGTGAAGTGGAGCTATAG
Protein sequenceShow/hide protein sequence
MVLIDFVSGGWEMNAGIDFLEFKPSEIAAAVAISVAREAQSVDPERAIPLLIQQLQMERVLKCLKLINDMLICGGGTVKDSRVSMSEPRSPSGVLDVTCLSYKSNDTAVG
SCANSSHHNSSEATKRRRLNRPCEVEL