| GenBank top hits | e value | %identity | Alignment |
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| KAA0065060.1 RNA polymerase sigma factor sigC [Cucumis melo var. makuwa] | 3.2e-269 | 92.29 | Show/hide |
Query: AKGREAAFNSGKLSFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPSGKASPFGMLM
AKGREAAFNSG+LSFFSS+CEEGESI RETLKTYTCLSEAPQTS DDLLNLEEIEMNSGAKSL+ LHYGIK+T PSKVEDNFSS TS+P+GKASPFG+LM
Subjt: AKGREAAFNSGKLSFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPSGKASPFGMLM
Query: ENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDNADKVA
ENLDVLEETF ESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLP+EDG DHNVNQKTNDQN D+ VYSGKRAGRRSVKKRAMDNADKVA
Subjt: ENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDNADKVA
Query: SRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRST
SRPLATRA KE IHSS IFSRKK+ NS KRR++VARNEAEMSTG+KVVANLERIRETLEKESGRIASM CWA+AA +DIKDLQKQLQFGWFC+DELLRST
Subjt: SRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRST
Query: NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSGGRRYSDDDLA
NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARK+LN GGRRYSDDD+A
Subjt: NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSGGRRYSDDDLA
Query: KATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSK
+ATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTAD SIQSPEETVKRELMKKDIFN+L+GLESRERQVL+LRYGLMDFQPKSLEEIGKLLHVSK
Subjt: KATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSK
Query: EWVRKIEKKAMTKLKNEET
EWVRKIEKKAMTKLKNEET
Subjt: EWVRKIEKKAMTKLKNEET
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| XP_004148429.2 RNA polymerase sigma factor sigC isoform X1 [Cucumis sativus] | 7.4e-258 | 87.9 | Show/hide |
Query: SEKEPHFLTYAKGREAAFNSGKLSFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPS
S+ PH +KGREAAFNSG+LSFFSS+CEEGESI RETLKTYTCLSEAPQTSA+DLLNLEEIEMNSGAKSL P+HYGIK+T PSKVEDNFSSCTSLP+
Subjt: SEKEPHFLTYAKGREAAFNSGKLSFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPS
Query: GKASPFGMLMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKK
GKASPFG+LMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHD S LPIE G DHNVNQKTNDQND++ VYS K+AGRRSVKK
Subjt: GKASPFGMLMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKK
Query: RAMDNADKVASRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGW
RAMDNADK+ASR L TRA KE IH S +FSRKK+ NS KRR+IVA NEAEMSTGVKVVANLERIRETLEKESGRIASM CWA+AA +DIKDLQKQLQFG
Subjt: RAMDNADKVASRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGW
Query: FCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSG
FC+DELLRSTNSLV+FLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFR STYIQYWIRKSMSRVVARNSRGIQIP SLTKAINQIQKARK+LN
Subjt: FCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSG
Query: GRRYSDDDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLE
GRRYSDDD+A+ATGLPLAKVRVASNCLKVVGS DQKMGDG+NMKYMEFTADMSIQSPEETVKR+LMKKDIFN+L+ LESRERQVL+LRYGL+DF+PKSLE
Subjt: GRRYSDDDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLE
Query: EIGKLLHVSKEWVRKIEKKAMTKLKNEET
EIGKLLH+SKEWVRKIEKKAMTKLKNEET
Subjt: EIGKLLHVSKEWVRKIEKKAMTKLKNEET
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| XP_008444981.1 PREDICTED: RNA polymerase sigma factor sigC [Cucumis melo] | 2.1e-268 | 91.91 | Show/hide |
Query: AKGREAAFNSGKLSFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPSGKASPFGMLM
+KGREAAFNSG+LSFFSS+CEEGESI RETLKTYTCLSEAPQTS DDLLNLEEIEMNSGAKSL+ LHYGIK+T PSKVEDNFSS TS+P+GKASPFG+LM
Subjt: AKGREAAFNSGKLSFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPSGKASPFGMLM
Query: ENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDNADKVA
ENLDVLEETF ESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLP+EDG DHNVNQKTNDQN D+ VYSGKRAGRRSVKKRAMDNADKVA
Subjt: ENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDNADKVA
Query: SRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRST
SRPLATRA KE IHSS IFSRKK+ NS KRR++VARNEAEMSTG+KVVANLERIRETLEKESGRIASM CWA+AA +DIKDLQKQLQFGWFC+DELLRST
Subjt: SRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRST
Query: NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSGGRRYSDDDLA
NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARK+LN GGRRYSDDD+A
Subjt: NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSGGRRYSDDDLA
Query: KATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSK
+ATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTAD SIQSPEETVKR+LMKKDIFN+L+GLESRERQVL+LRYGLMDFQPKSLEEIGKLLHVSK
Subjt: KATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSK
Query: EWVRKIEKKAMTKLKNEET
EWVRKIEKKAMTKLKNEET
Subjt: EWVRKIEKKAMTKLKNEET
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| XP_022131819.1 RNA polymerase sigma factor sigC isoform X1 [Momordica charantia] | 1.1e-253 | 87.52 | Show/hide |
Query: AKGREAAFNSGKLSFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPSGKASPFGMLM
+KGREA+FNS +LSFFS++CEEGES SRETLKTYTCLSEAPQTSADDLL+L+EIE+NS A+ L+ HYGIKNTGPSK+EDNFSSCTSLP+GKAS FGMLM
Subjt: AKGREAAFNSGKLSFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPSGKASPFGMLM
Query: ENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLK--TSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDNADK
ENLDVLEE FTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLK TSSF DLSDLPIEDGG HNVNQKT+ QNDDIIVYSGK+ GRRS+K+RA D ADK
Subjt: ENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLK--TSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDNADK
Query: VASRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLR
VAS+P AT AAKE H+SA F RK+ +NSR+RR++VARNEAEMSTGVKVVANLERIRETLEKES + ASM CWADAAGIDIKDL KQLQFGWFCQ+ELLR
Subjt: VASRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLR
Query: STNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSGGRRYSDDD
STNSLVLFLAKKYRC+GLPMEDLVQAGA+GVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARK LN+G RRYSDDD
Subjt: STNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSGGRRYSDDD
Query: LAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHV
+AKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTAD SIQSPEETVK++LMKKDIFN+LEGLE RERQVL LRYGL DFQPKSLEEIGKLLHV
Subjt: LAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHV
Query: SKEWVRKIEKKAMTKLKNEET
SKEWVRKIEKKAMTKLKNEET
Subjt: SKEWVRKIEKKAMTKLKNEET
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| XP_038884658.1 RNA polymerase sigma factor sigC isoform X1 [Benincasa hispida] | 2.7e-268 | 91.78 | Show/hide |
Query: AKGREAAFNSGKLSFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPSGKASPFGMLM
+KGREAAFNSG+LSFFSS+ EEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMN GAKSL+PLHYGIKNT PSKVEDNFSSCTS PSGKASPFGMLM
Subjt: AKGREAAFNSGKLSFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPSGKASPFGMLM
Query: ENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPI----EDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDNA
ENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPI ED GDHNVNQKT D+NDDIIVYSGKRA RRSVKKRAMD+A
Subjt: ENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPI----EDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDNA
Query: DKVASRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDEL
DKV S+PLATRAAKE IHSSAI SRKKA NSRKRR+I+ARNEAEMSTGVKVVANLERIRETLEKESGR+ SM CWA+AAG+DIKDL+KQLQFGWFCQDEL
Subjt: DKVASRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDEL
Query: LRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSGGRRYSD
LRSTNSL+LFLA+KYRCSGLPMEDLVQAG+LGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARN+RGIQIPWSLTKAINQIQKARK+LN+GGRRYSD
Subjt: LRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSGGRRYSD
Query: DDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLL
DD+AKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVK++LMKKDIFNVLEGLESRERQVL+LRYGL+DFQPKSLEEIGKLL
Subjt: DDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLL
Query: HVSKEWVRKIEKKAMTKLKNEET
HVSKEWVRKIEKKAMTKL++EET
Subjt: HVSKEWVRKIEKKAMTKLKNEET
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0A0LLW1 Uncharacterized protein | 3.6e-258 | 87.9 | Show/hide |
Query: SEKEPHFLTYAKGREAAFNSGKLSFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPS
S+ PH +KGREAAFNSG+LSFFSS+CEEGESI RETLKTYTCLSEAPQTSA+DLLNLEEIEMNSGAKSL P+HYGIK+T PSKVEDNFSSCTSLP+
Subjt: SEKEPHFLTYAKGREAAFNSGKLSFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPS
Query: GKASPFGMLMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKK
GKASPFG+LMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHD S LPIE G DHNVNQKTNDQND++ VYS K+AGRRSVKK
Subjt: GKASPFGMLMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKK
Query: RAMDNADKVASRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGW
RAMDNADK+ASR L TRA KE IH S +FSRKK+ NS KRR+IVA NEAEMSTGVKVVANLERIRETLEKESGRIASM CWA+AA +DIKDLQKQLQFG
Subjt: RAMDNADKVASRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGW
Query: FCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSG
FC+DELLRSTNSLV+FLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFR STYIQYWIRKSMSRVVARNSRGIQIP SLTKAINQIQKARK+LN
Subjt: FCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSG
Query: GRRYSDDDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLE
GRRYSDDD+A+ATGLPLAKVRVASNCLKVVGS DQKMGDG+NMKYMEFTADMSIQSPEETVKR+LMKKDIFN+L+ LESRERQVL+LRYGL+DF+PKSLE
Subjt: GRRYSDDDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLE
Query: EIGKLLHVSKEWVRKIEKKAMTKLKNEET
EIGKLLH+SKEWVRKIEKKAMTKLKNEET
Subjt: EIGKLLHVSKEWVRKIEKKAMTKLKNEET
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| A0A1S3BBM8 RNA polymerase sigma factor sigC | 1.0e-268 | 91.91 | Show/hide |
Query: AKGREAAFNSGKLSFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPSGKASPFGMLM
+KGREAAFNSG+LSFFSS+CEEGESI RETLKTYTCLSEAPQTS DDLLNLEEIEMNSGAKSL+ LHYGIK+T PSKVEDNFSS TS+P+GKASPFG+LM
Subjt: AKGREAAFNSGKLSFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPSGKASPFGMLM
Query: ENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDNADKVA
ENLDVLEETF ESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLP+EDG DHNVNQKTNDQN D+ VYSGKRAGRRSVKKRAMDNADKVA
Subjt: ENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDNADKVA
Query: SRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRST
SRPLATRA KE IHSS IFSRKK+ NS KRR++VARNEAEMSTG+KVVANLERIRETLEKESGRIASM CWA+AA +DIKDLQKQLQFGWFC+DELLRST
Subjt: SRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRST
Query: NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSGGRRYSDDDLA
NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARK+LN GGRRYSDDD+A
Subjt: NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSGGRRYSDDDLA
Query: KATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSK
+ATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTAD SIQSPEETVKR+LMKKDIFN+L+GLESRERQVL+LRYGLMDFQPKSLEEIGKLLHVSK
Subjt: KATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSK
Query: EWVRKIEKKAMTKLKNEET
EWVRKIEKKAMTKLKNEET
Subjt: EWVRKIEKKAMTKLKNEET
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| A0A5A7VCX9 RNA polymerase sigma factor sigC | 1.5e-269 | 92.29 | Show/hide |
Query: AKGREAAFNSGKLSFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPSGKASPFGMLM
AKGREAAFNSG+LSFFSS+CEEGESI RETLKTYTCLSEAPQTS DDLLNLEEIEMNSGAKSL+ LHYGIK+T PSKVEDNFSS TS+P+GKASPFG+LM
Subjt: AKGREAAFNSGKLSFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPSGKASPFGMLM
Query: ENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDNADKVA
ENLDVLEETF ESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLP+EDG DHNVNQKTNDQN D+ VYSGKRAGRRSVKKRAMDNADKVA
Subjt: ENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDNADKVA
Query: SRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRST
SRPLATRA KE IHSS IFSRKK+ NS KRR++VARNEAEMSTG+KVVANLERIRETLEKESGRIASM CWA+AA +DIKDLQKQLQFGWFC+DELLRST
Subjt: SRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRST
Query: NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSGGRRYSDDDLA
NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARK+LN GGRRYSDDD+A
Subjt: NSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSGGRRYSDDDLA
Query: KATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSK
+ATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTAD SIQSPEETVKRELMKKDIFN+L+GLESRERQVL+LRYGLMDFQPKSLEEIGKLLHVSK
Subjt: KATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSK
Query: EWVRKIEKKAMTKLKNEET
EWVRKIEKKAMTKLKNEET
Subjt: EWVRKIEKKAMTKLKNEET
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| A0A6J1BRC1 RNA polymerase sigma factor sigC isoform X1 | 5.3e-254 | 87.52 | Show/hide |
Query: AKGREAAFNSGKLSFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPSGKASPFGMLM
+KGREA+FNS +LSFFS++CEEGES SRETLKTYTCLSEAPQTSADDLL+L+EIE+NS A+ L+ HYGIKNTGPSK+EDNFSSCTSLP+GKAS FGMLM
Subjt: AKGREAAFNSGKLSFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPSGKASPFGMLM
Query: ENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLK--TSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDNADK
ENLDVLEE FTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLK TSSF DLSDLPIEDGG HNVNQKT+ QNDDIIVYSGK+ GRRS+K+RA D ADK
Subjt: ENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLK--TSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDNADK
Query: VASRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLR
VAS+P AT AAKE H+SA F RK+ +NSR+RR++VARNEAEMSTGVKVVANLERIRETLEKES + ASM CWADAAGIDIKDL KQLQFGWFCQ+ELLR
Subjt: VASRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLR
Query: STNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSGGRRYSDDD
STNSLVLFLAKKYRC+GLPMEDLVQAGA+GVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARK LN+G RRYSDDD
Subjt: STNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSGGRRYSDDD
Query: LAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHV
+AKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTAD SIQSPEETVK++LMKKDIFN+LEGLE RERQVL LRYGL DFQPKSLEEIGKLLHV
Subjt: LAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHV
Query: SKEWVRKIEKKAMTKLKNEET
SKEWVRKIEKKAMTKLKNEET
Subjt: SKEWVRKIEKKAMTKLKNEET
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| A0A6J1KA34 RNA polymerase sigma factor sigC-like isoform X2 | 4.2e-251 | 88.08 | Show/hide |
Query: AKGREAAFNSGKLSFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPSGKASPFGMLM
+KGREA+FNSG+LSFFSS CEEGE+ISRE LKTYTCLSEAPQT AD LL+LEE E+NSGAKSL+ LHYG KN+GPSKVEDNF SCTSLP+G+ASPF MLM
Subjt: AKGREAAFNSGKLSFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPSGKASPFGMLM
Query: ENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLK-TSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDNADKV
ENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFN CLSRTLK +SSF DLSDLPIE GGDHNVNQKT+DQN +IIVYSGKRAGRRSVK+RAMDNADKV
Subjt: ENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLK-TSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDNADKV
Query: ASRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRS
ASRPLATRAAKE S SRKKA NS+KRR IVARNEAEMSTGVKVVANLERIRETLEKESGR ASM CWADA+ IDIKDLQKQLQFGWFCQDELLRS
Subjt: ASRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRS
Query: TNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSGGRRYSDDDL
TNSLV+FLAKKYRCSGLPMEDLVQAGA+GVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVAR+SRGIQIPWSLTKAINQIQKARK LN+ GRRYSDDD+
Subjt: TNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSGGRRYSDDDL
Query: AKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHVS
AKATGLPLAKVRVASNCLKVVGSVDQK+GDGLNMKYME TAD SI+SPE+TVKR LMKKDIFN+LE LESRERQVL+LRYGLMD QPKSLEEIGKLL VS
Subjt: AKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHVS
Query: KEWVRKIEKKAMTKLKNEET
KEWVRKIE+KA TKLKNEET
Subjt: KEWVRKIEKKAMTKLKNEET
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| SwissProt top hits | e value | %identity | Alignment |
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| O22056 RNA polymerase sigma factor sigB | 1.1e-51 | 32.21 | Show/hide |
Query: TLKTSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDN------ADKVASRPLATR-AAKENIHSSAIFSRKKAYNSRKRRVIV
T S+ + DL E V + + V S ++ R++ + + ++ + K S P R A+E H+ + + +S K ++
Subjt: TLKTSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDN------ADKVASRPLATR-AAKENIHSSAIFSRKKAYNSRKRRVIV
Query: ARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVE
R E E+S G++ + LER++ L + SGR + WA AAG+D K L++++ G C+D++++S LV+ +AK Y+ +G+ ++DLVQ G G+++G E
Subjt: ARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVE
Query: RFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNS-GGRRYSDDDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNM
+FD +GF+FSTY +WI++++ + ++ SR I++P+ + +A ++++ARK L S G+ ++++A+ATGL + ++ K S+DQK+G N+
Subjt: RFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNS-GGRRYSDDDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNM
Query: KYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKNEE
K E AD + E+ + +E M++D+ VL+ L +RE+QV+ R+G+ D + K+L+EIG+++ VS+E VR+IE A KLKN++
Subjt: KYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKNEE
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| O24621 RNA polymerase sigma factor sigC | 1.5e-112 | 46.48 | Show/hide |
Query: SFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTES
SF SSV EE ++LK C S +P T+ +++ +E+ +N G E ++SS + L + +L +NL LEETF
Subjt: SFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTES
Query: GMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRA------MDNADKVASRPLATR
+ +ERDI+LQ+ KLGA E F TCLSR +S LSD N + V S RR VKK+A +N D+ +S P+ R
Subjt: GMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRA------MDNADKVASRPLATR
Query: AAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRSTNSLVLFL
NI + ++ RK+R ++RNE EMSTGVK+VA++ERIR LE+ESG++AS+ CWA AAG++ K L + L +GW+C+DEL++ST SLVLFL
Subjt: AAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRSTNSLVLFL
Query: AKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKML-NSGGRRY-SDDDLAKATGL
A+ YR G+ EDL+QAG +GVLQG ERFD RG++FSTY+QYWIRKSMS +V+R++RG+ IP S+ + IN IQKARK L S G +Y +D+++AK TG
Subjt: AKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKML-NSGGRRY-SDDDLAKATGL
Query: PLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSKEWVRK
+ K+R A+ CLKVVGS+D+K+GD K++EFT D +++SPEE V R+ ++DI ++LEGLE RE+QV++LRYGL D++PKSLEEIGKLL VSKEW+RK
Subjt: PLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSKEWVRK
Query: IEKKAMTKLKNE
IE++AM KL+++
Subjt: IEKKAMTKLKNE
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| P26683 RNA polymerase sigma factor SigA | 9.7e-43 | 30.96 | Show/hide |
Query: DLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDNADKVASRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLE
DL + D GD +++ Q D+ SGK A R T++ K++ +I R + R++ A E E++ + + LE
Subjt: DLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDNADKVASRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLE
Query: RIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWI
R+RE L ++ R WA+A + + + +L G +D++++S LV+ +AKKY GL +DL+Q G+LG+++ E+FD ++G++FSTY +WI
Subjt: RIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWI
Query: RKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSG-GRRYSDDDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETV
R++++R +A SR I++P L + I++I+K K+L+ GR+ +++++A + + K+R + ++ S++ +G + + +F + ++PE+ V
Subjt: RKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSG-GRRYSDDDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETV
Query: KRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKN
+ L+++D+ VL+ L RER VL LRYGL D + K+LEEIG++ +V++E +R+IE KA+ KL++
Subjt: KRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKN
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| P38023 RNA polymerase sigma factor SigA1 | 1.9e-43 | 32.62 | Show/hide |
Query: AMDNADKVASRPLATRAAKENIHSSAIFSRKKAYNSR--KRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFG
A+D+ D V A AK + + + Y + R++ A E E++ + + LERIR+ L ++ R+ S WA A + + +++L G
Subjt: AMDNADKVASRPLATRAAKENIHSSAIFSRKKAYNSR--KRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFG
Query: WFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNS
+D++++S LV+ +AKKY GL +DL+Q G+LG+++ E+FD ++G++FSTY +WIR++++R +A SR I++P L + I++I+K K+L+
Subjt: WFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNS
Query: G-GRRYSDDDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKS
GR+ +++++A + + K+R + ++ S++ +G + + +F + ++PE+ V + L+++D+ VL L RER VL LRYGL D + K+
Subjt: G-GRRYSDDDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKS
Query: LEEIGKLLHVSKEWVRKIEKKAMTKLKN
LEEIG+L +V++E +R+IE KA+ KL++
Subjt: LEEIGKLLHVSKEWVRKIEKKAMTKLKN
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| Q9LD95 RNA polymerase sigma factor sigF, chloroplastic | 1.5e-40 | 29.8 | Show/hide |
Query: IVYSGKRAGRRSVKKRA--MDNADKVASRPLATRAAK------ENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIAS
IV S ++ RR+ +RA ++ D P T A K +N + +F + ++++ A+ EAE+ + ++ + LE+++ LE ++G +
Subjt: IVYSGKRAGRRSVKKRA--MDNADKVASRPLATRAAK------ENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIAS
Query: MGCWADAAGIDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGI
+G WA+A GI L+ + G +++L+ + LV+ +AK+Y+ GL +DL+Q G++G+++ VE+F P+ G RF+TY +WIR+S+ + + +NSR I
Subjt: MGCWADAAGIDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGI
Query: QIPWSLTKAINQIQKARK-MLNSGGRRYSDDDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEG
++P ++ + ++ +ARK + G R S ++LA G+ K+ + S+ Q + + + E T D I++P +V ++LM+ + N+L
Subjt: QIPWSLTKAINQIQKARK-MLNSGGRRYSDDDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEG
Query: LESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLK
L +ER+++ LR+G+ + +SL EIG++ +SKE VR++E +A+ +LK
Subjt: LESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLK
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 8.1e-53 | 32.21 | Show/hide |
Query: TLKTSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDN------ADKVASRPLATR-AAKENIHSSAIFSRKKAYNSRKRRVIV
T S+ + DL E V + + V S ++ R++ + + ++ + K S P R A+E H+ + + +S K ++
Subjt: TLKTSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRAMDN------ADKVASRPLATR-AAKENIHSSAIFSRKKAYNSRKRRVIV
Query: ARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVE
R E E+S G++ + LER++ L + SGR + WA AAG+D K L++++ G C+D++++S LV+ +AK Y+ +G+ ++DLVQ G G+++G E
Subjt: ARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVE
Query: RFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNS-GGRRYSDDDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNM
+FD +GF+FSTY +WI++++ + ++ SR I++P+ + +A ++++ARK L S G+ ++++A+ATGL + ++ K S+DQK+G N+
Subjt: RFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNS-GGRRYSDDDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNM
Query: KYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKNEE
K E AD + E+ + +E M++D+ VL+ L +RE+QV+ R+G+ D + K+L+EIG+++ VS+E VR+IE A KLKN++
Subjt: KYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKNEE
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| AT1G64860.1 sigma factor A | 4.5e-27 | 29.63 | Show/hide |
Query: VIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQ
V V R ++ +G+++ + R+++ L G S A + I +LQ L +++L S LV+ +A++Y G M DLVQ G +G+L+
Subjt: VIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQ
Query: GVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSGGRRYSDDDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGL
G+E+FD +GFR STY+ +WIR+ +SR + NSR +++P L + + I+ A+ L G S D +A++ + KVR A+ + V S+D+ L
Subjt: GVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKMLNSGGRRYSDDDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGL
Query: N----MKYMEFTADMSIQ-SPEETVKRELMKKDIFNVLEG-LESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKNEETQAK
N + + AD ++ +P +K+++ ++ L RE++++ L YGL D + + E+I K + +S+E VR++ A+ KLK+ + K
Subjt: N----MKYMEFTADMSIQ-SPEETVKRELMKKDIFNVLEG-LESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKNEETQAK
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| AT2G36990.1 RNApolymerase sigma-subunit F | 1.1e-41 | 29.8 | Show/hide |
Query: IVYSGKRAGRRSVKKRA--MDNADKVASRPLATRAAK------ENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIAS
IV S ++ RR+ +RA ++ D P T A K +N + +F + ++++ A+ EAE+ + ++ + LE+++ LE ++G +
Subjt: IVYSGKRAGRRSVKKRA--MDNADKVASRPLATRAAK------ENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIAS
Query: MGCWADAAGIDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGI
+G WA+A GI L+ + G +++L+ + LV+ +AK+Y+ GL +DL+Q G++G+++ VE+F P+ G RF+TY +WIR+S+ + + +NSR I
Subjt: MGCWADAAGIDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGI
Query: QIPWSLTKAINQIQKARK-MLNSGGRRYSDDDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEG
++P ++ + ++ +ARK + G R S ++LA G+ K+ + S+ Q + + + E T D I++P +V ++LM+ + N+L
Subjt: QIPWSLTKAINQIQKARK-MLNSGGRRYSDDDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEG
Query: LESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLK
L +ER+++ LR+G+ + +SL EIG++ +SKE VR++E +A+ +LK
Subjt: LESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLK
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| AT3G53920.1 RNApolymerase sigma-subunit C | 1.1e-113 | 46.48 | Show/hide |
Query: SFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTES
SF SSV EE ++LK C S +P T+ +++ +E+ +N G E ++SS + L + +L +NL LEETF
Subjt: SFFSSVCEEGESISRETLKTYTCLSEAPQTSADDLLNLEEIEMNSGAKSLTPLHYGIKNTGPSKVEDNFSSCTSLPSGKASPFGMLMENLDVLEETFTES
Query: GMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRA------MDNADKVASRPLATR
+ +ERDI+LQ+ KLGA E F TCLSR +S LSD N + V S RR VKK+A +N D+ +S P+ R
Subjt: GMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSFHDLSDLPIEDGGDHNVNQKTNDQNDDIIVYSGKRAGRRSVKKRA------MDNADKVASRPLATR
Query: AAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRSTNSLVLFL
NI + ++ RK+R ++RNE EMSTGVK+VA++ERIR LE+ESG++AS+ CWA AAG++ K L + L +GW+C+DEL++ST SLVLFL
Subjt: AAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAGIDIKDLQKQLQFGWFCQDELLRSTNSLVLFL
Query: AKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKML-NSGGRRY-SDDDLAKATGL
A+ YR G+ EDL+QAG +GVLQG ERFD RG++FSTY+QYWIRKSMS +V+R++RG+ IP S+ + IN IQKARK L S G +Y +D+++AK TG
Subjt: AKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKML-NSGGRRY-SDDDLAKATGL
Query: PLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSKEWVRK
+ K+R A+ CLKVVGS+D+K+GD K++EFT D +++SPEE V R+ ++DI ++LEGLE RE+QV++LRYGL D++PKSLEEIGKLL VSKEW+RK
Subjt: PLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVLMLRYGLMDFQPKSLEEIGKLLHVSKEWVRK
Query: IEKKAMTKLKNE
IE++AM KL+++
Subjt: IEKKAMTKLKNE
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| AT5G13730.1 sigma factor 4 | 2.7e-32 | 29.91 | Show/hide |
Query: VYSGKRAGRRSVKKRAMDNADKVASRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAG
+ S KR RR ++ + + A E I + + + + SR E ++ +K A LE + ++E E+ ++ + A G
Subjt: VYSGKRAGRRSVKKRAMDNADKVASRPLATRAAKENIHSSAIFSRKKAYNSRKRRVIVARNEAEMSTGVKVVANLERIRETLEKESGRIASMGCWADAAG
Query: IDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKA
+ + L ++++ R LV+ +A Y+ GL ++DL+Q G++G+L+G ERFDP RG++ STY+ +WI++++ R +A SR +++P S+ +
Subjt: IDIKDLQKQLQFGWFCQDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALGVLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKA
Query: INQIQKARKMLNSGGRRY-SDDDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVL
++ +A +L RR S +++A+ L ++ VR+A + S+D+ M E PEE VKRE MK +I +L L +RE +VL
Subjt: INQIQKARKMLNSGGRRY-SDDDLAKATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADMSIQSPEETVKRELMKKDIFNVLEGLESRERQVL
Query: MLRYGLMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKN
L +GL P S EEIGK L +S+E VR+I A+ KL+N
Subjt: MLRYGLMDFQPKSLEEIGKLLHVSKEWVRKIEKKAMTKLKN
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