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HG10004601 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004601
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionLPXTG-motif cell wall anchor domain protein
Genome locationChr08:18760766..18762835
RNA-Seq ExpressionHG10004601
SyntenyHG10004601
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAJ85002.1 predicted protein, partial [Hordeum vulgare subsp. vulgare]1.2e-1847.62Show/hide
Query:  MVIKTCSFILKGPGFIVNSNRVPLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTCLI
        MV+ TCSF LKGPG  VNS+R P KK R GS  A++ P GTTA CA +    +G   YQK    KES TQ A P THI NV TG  GSS  GTV +TC  
Subjt:  MVIKTCSFILKGPGFIVNSNRVPLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTCLI

Query:  GHSSETTDSAYSSSPATIGTGQPPYD
              + + +S+S +   +G+P  D
Subjt:  GHSSETTDSAYSSSPATIGTGQPPYD

EEC79911.1 hypothetical protein OsI_21458 [Oryza sativa Indica Group]3.8e-1752.88Show/hide
Query:  MVIKTCSFILKGPGFIVNSNRVPLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTCLI
        MV+ TCS  L GPG  VNS+  P KK R GS  A++ P GTTAICA +  T +G   YQK    K+S TQ A P THI NV TG  GSS  GTV +TC  
Subjt:  MVIKTCSFILKGPGFIVNSNRVPLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTCLI

Query:  GHSS
        G  S
Subjt:  GHSS

KAF8391690.1 hypothetical protein HHK36_023999 [Tetracentron sinense]5.6e-2156.73Show/hide
Query:  MVIKTCSFILKGPGFIVNSNRV-PLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTCL
        MVIKTCSF L GPGF  N + V  +  G  GSV AI +P G T ICA  ED DNG   Y KNWF K   TQ  TP TH+ NVR G +GSSV GTV  TC 
Subjt:  MVIKTCSFILKGPGFIVNSNRV-PLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTCL

Query:  IGHS
         G S
Subjt:  IGHS

PON73570.1 hypothetical protein PanWU01x14_057520, partial [Parasponia andersonii]5.1e-2251.38Show/hide
Query:  MVIKTCSFILKGPGFIVNSNRVPLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTCLI
        MV++TCS  L GPG  VNS RVP +K R+GS+ A+ WPRGTTAI A +   + G   YQKNW  KES    + PK HI  V TG++GSSV GTV +TC  
Subjt:  MVIKTCSFILKGPGFIVNSNRVPLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTCLI

Query:  GHSSETTDS
        G  S ++ +
Subjt:  GHSSETTDS

PON92826.1 hypothetical protein TorRG33x02_114240 [Trema orientale]1.3e-2043.42Show/hide
Query:  MVIKTCSFILKGPGFIVNSNRVPLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTCLI
        MV++TCS  L GPG  VNS RVP +K R+GS+ A+ WPRGTTAI A +   + G   YQKNW  KES    + PK HI  V TG++GSSV GTV +TC  
Subjt:  MVIKTCSFILKGPGFIVNSNRVPLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTCLI

Query:  GHSSETTDSAYSSSPATIGTGQPPYDGGQTDHRAAFSAVRRRSEEEKEKKRK
        G         +SSSP++        D  + D  A+ S++    +  K+ K+K
Subjt:  GHSSETTDSAYSSSPATIGTGQPPYDGGQTDHRAAFSAVRRRSEEEKEKKRK

TrEMBL top hitse value%identityAlignment
A0A0E0DW16 Uncharacterized protein2.8e-1855.1Show/hide
Query:  MVIKTCSFILKGPGFIVNSNRVPLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTC
        MV+ TCS  L GPG  VNS+  P KK   GSV A++ P GTTAICA +    +G   YQKNW  KES    A P THILNV TG  GSS+ GTV  TC
Subjt:  MVIKTCSFILKGPGFIVNSNRVPLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTC

A0A2P2IVI1 Uncharacterized protein4.1e-2560.75Show/hide
Query:  MVIKTCSFILKGPGFIVNSNRVPLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTCLI
        MVI+TCSF LKGPGF VNS RVPLK  R   + AI  PRGTTA  A +   D G   YQKNW  K++ TQ   PK HILNVRTGK GSSV GTV +TCLI
Subjt:  MVIKTCSFILKGPGFIVNSNRVPLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTCLI

Query:  GHSSETT
        G  S  +
Subjt:  GHSSETT

A0A2P5DJX3 Uncharacterized protein (Fragment)2.5e-2251.38Show/hide
Query:  MVIKTCSFILKGPGFIVNSNRVPLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTCLI
        MV++TCS  L GPG  VNS RVP +K R+GS+ A+ WPRGTTAI A +   + G   YQKNW  KES    + PK HI  V TG++GSSV GTV +TC  
Subjt:  MVIKTCSFILKGPGFIVNSNRVPLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTCLI

Query:  GHSSETTDS
        G  S ++ +
Subjt:  GHSSETTDS

A0A2P5F4W1 Uncharacterized protein6.1e-2143.42Show/hide
Query:  MVIKTCSFILKGPGFIVNSNRVPLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTCLI
        MV++TCS  L GPG  VNS RVP +K R+GS+ A+ WPRGTTAI A +   + G   YQKNW  KES    + PK HI  V TG++GSSV GTV +TC  
Subjt:  MVIKTCSFILKGPGFIVNSNRVPLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTCLI

Query:  GHSSETTDSAYSSSPATIGTGQPPYDGGQTDHRAAFSAVRRRSEEEKEKKRK
        G         +SSSP++        D  + D  A+ S++    +  K+ K+K
Subjt:  GHSSETTDSAYSSSPATIGTGQPPYDGGQTDHRAAFSAVRRRSEEEKEKKRK

F2CQ81 Predicted protein (Fragment)5.7e-1947.62Show/hide
Query:  MVIKTCSFILKGPGFIVNSNRVPLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTCLI
        MV+ TCSF LKGPG  VNS+R P KK R GS  A++ P GTTA CA +    +G   YQK    KES TQ A P THI NV TG  GSS  GTV +TC  
Subjt:  MVIKTCSFILKGPGFIVNSNRVPLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTCLI

Query:  GHSSETTDSAYSSSPATIGTGQPPYD
              + + +S+S +   +G+P  D
Subjt:  GHSSETTDSAYSSSPATIGTGQPPYD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAATCAAAACATGCTCCTTTATATTGAAGGGTCCAGGATTCATAGTGAACTCAAACCGCGTGCCTTTGAAAAAGGGTCGAGTCGGAAGTGTTTTGGCCATCAAATG
GCCAAGAGGCACAACCGCAATTTGTGCAGCAATCGAAGATACTGACAATGGGTTGGATCTATACCAGAAGAATTGGTTCACAAAGGAGAGTATGACACAAGCCGCAACCC
CCAAAACCCACATTCTGAATGTGAGAACTGGCAAGTTGGGGTCATCGGTTTTCGGAACTGTAATATCAACTTGCTTGATCGGGCACTCATCAGAGACCACTGACTCTGCT
TACTCATCGTCGCCGGCGACGATAGGAACTGGTCAACCACCATACGACGGCGGTCAAACCGACCATCGGGCGGCGTTTTCGGCGGTGCGCAGGCGAAGTGAAGAGGAAAA
AGAAAAGAAGAGAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAATCAAAACATGCTCCTTTATATTGAAGGGTCCAGGATTCATAGTGAACTCAAACCGCGTGCCTTTGAAAAAGGGTCGAGTCGGAAGTGTTTTGGCCATCAAATG
GCCAAGAGGCACAACCGCAATTTGTGCAGCAATCGAAGATACTGACAATGGGTTGGATCTATACCAGAAGAATTGGTTCACAAAGGAGAGTATGACACAAGCCGCAACCC
CCAAAACCCACATTCTGAATGTGAGAACTGGCAAGTTGGGGTCATCGGTTTTCGGAACTGTAATATCAACTTGCTTGATCGGGCACTCATCAGAGACCACTGACTCTGCT
TACTCATCGTCGCCGGCGACGATAGGAACTGGTCAACCACCATACGACGGCGGTCAAACCGACCATCGGGCGGCGTTTTCGGCGGTGCGCAGGCGAAGTGAAGAGGAAAA
AGAAAAGAAGAGAAAATAA
Protein sequenceShow/hide protein sequence
MVIKTCSFILKGPGFIVNSNRVPLKKGRVGSVLAIKWPRGTTAICAAIEDTDNGLDLYQKNWFTKESMTQAATPKTHILNVRTGKLGSSVFGTVISTCLIGHSSETTDSA
YSSSPATIGTGQPPYDGGQTDHRAAFSAVRRRSEEEKEKKRK