; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004603 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004603
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAminoacyl-tRNA hydrolase
Genome locationChr08:18779311..18780829
RNA-Seq ExpressionHG10004603
SyntenyHG10004603
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsIPR002833 - Peptidyl-tRNA hydrolase, PTH2
IPR023476 - Peptidyl-tRNA hydrolase II domain superfamily
IPR042237 - Putative peptidyl-tRNA hydrolase PTRHD1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011649759.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X2 [Cucumis sativus]6.1e-8184.74Show/hide
Query:  MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEET-ADVLIQYVVLRRDLIDSWPLGSVVTQ
        MTCVISAS+F  SISKS  LCS  R RV PSS L   SS R ++PF SASMS+S E+NSV  PDD GAKAEET ADVLIQYVVLRRDLIDSWPLGSVVTQ
Subjt:  MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEET-ADVLIQYVVLRRDLIDSWPLGSVVTQ

Query:  GCHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL
        GCHASVSAIWLNK+DPHT+DYC+PHNIDSMHKVTLEVKGETQMVNLSEKLKANSI+HKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL
Subjt:  GCHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL

XP_022962062.1 putative peptidyl-tRNA hydrolase PTRHD1 [Cucurbita moschata]4.7e-8184.82Show/hide
Query:  MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEETADVLIQYVVLRRDLIDSWPLGSVVTQG
        M  VISAS+F FSISKST+LCS SR RV PSS L  RS NRNSN FSS SMSESAESNS PPPDD     E+TADVLIQYVVLRRDLIDSWPLGSVVTQG
Subjt:  MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEETADVLIQYVVLRRDLIDSWPLGSVVTQG

Query:  CHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        CHASVSA+WLNK+DPHT +YCSPHNIDSMHKVTLEVKGETQ+VNLSEKL+ANSI HKLWIEQPENIPTCLATKPYPKSVVS FFKKLKLCK
Subjt:  CHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

XP_023546189.1 putative peptidyl-tRNA hydrolase PTRHD1 [Cucurbita pepo subsp. pepo]2.5e-8285.86Show/hide
Query:  MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEETADVLIQYVVLRRDLIDSWPLGSVVTQG
        M  VISAS F FSISKST+LCS SR RV PSS L  RS NRNSN FSSASMSESAESNS PPPDDG    E+TADVLIQYVVLRRDLIDSWPLGSVVTQG
Subjt:  MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEETADVLIQYVVLRRDLIDSWPLGSVVTQG

Query:  CHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        CHASVSA+WLNK+DPHT++YCSPHNIDSMHKVTLEVKGETQ+VNLSEKLKA+SI HKLWIEQPENIPTCLATKPYPKSVVS FFKKLKLCK
Subjt:  CHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

XP_031736857.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucumis sativus]6.1e-8184.74Show/hide
Query:  MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEET-ADVLIQYVVLRRDLIDSWPLGSVVTQ
        MTCVISAS+F  SISKS  LCS  R RV PSS L   SS R ++PF SASMS+S E+NSV  PDD GAKAEET ADVLIQYVVLRRDLIDSWPLGSVVTQ
Subjt:  MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEET-ADVLIQYVVLRRDLIDSWPLGSVVTQ

Query:  GCHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL
        GCHASVSAIWLNK+DPHT+DYC+PHNIDSMHKVTLEVKGETQMVNLSEKLKANSI+HKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL
Subjt:  GCHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKL

XP_038884124.1 putative peptidyl-tRNA hydrolase PTRHD1 [Benincasa hispida]3.4e-9291.62Show/hide
Query:  MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEETADVLIQYVVLRRDLIDSWPLGSVVTQG
        MTCVISAS+FAFSISKSTRLCS S PRV PSS L  RS NRNSNPFSSASMS+SAE+NSVPPPDDGGAKAEE ADVLIQYVVLRRDLIDSWPLGSVVTQG
Subjt:  MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEETADVLIQYVVLRRDLIDSWPLGSVVTQG

Query:  CHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        CHASVSAIWLNK+DPHT+DYCSPHNIDSMHKVTLEVKGETQ+VNLSEKLKANSI+HKLWIEQPENIPTCLATKPYPKS+VSPFFKKLKLCK
Subjt:  CHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

TrEMBL top hitse value%identityAlignment
A0A0A0LLQ2 Aminoacyl-tRNA hydrolase7.0e-8384.9Show/hide
Query:  MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEET-ADVLIQYVVLRRDLIDSWPLGSVVTQ
        MTCVISAS+F  SISKS  LCS  R RV PSS L   SS R ++PF SASMS+S E+NSV  PDD GAKAEET ADVLIQYVVLRRDLIDSWPLGSVVTQ
Subjt:  MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEET-ADVLIQYVVLRRDLIDSWPLGSVVTQ

Query:  GCHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        GCHASVSAIWLNK+DPHT+DYC+PHNIDSMHKVTLEVKGETQMVNLSEKLKANSI+HKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
Subjt:  GCHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

A0A6J1GJ11 Aminoacyl-tRNA hydrolase4.0e-7883.25Show/hide
Query:  MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEETADVLIQYVVLRRDLIDSWPLGSVVTQG
        M  VISAS+F FSIS S RLC N+R   LPSS    RS N NS  FSSASMSES ESNSV P DDGGAKAEE ADVL+QYVVLRRDLIDSWPLGSVVTQG
Subjt:  MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEETADVLIQYVVLRRDLIDSWPLGSVVTQG

Query:  CHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        CHASVSAIWLNK+DPHT++YCSP NIDSMHKVTLEVKGETQ+VNLSEKLKANSI+HKLW+EQPENIPTCLA+KPYPKSVVSPFFKKLKLCK
Subjt:  CHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

A0A6J1HBR1 Aminoacyl-tRNA hydrolase2.3e-8184.82Show/hide
Query:  MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEETADVLIQYVVLRRDLIDSWPLGSVVTQG
        M  VISAS+F FSISKST+LCS SR RV PSS L  RS NRNSN FSS SMSESAESNS PPPDD     E+TADVLIQYVVLRRDLIDSWPLGSVVTQG
Subjt:  MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEETADVLIQYVVLRRDLIDSWPLGSVVTQG

Query:  CHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        CHASVSA+WLNK+DPHT +YCSPHNIDSMHKVTLEVKGETQ+VNLSEKL+ANSI HKLWIEQPENIPTCLATKPYPKSVVS FFKKLKLCK
Subjt:  CHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

A0A6J1K304 Aminoacyl-tRNA hydrolase1.9e-8084.82Show/hide
Query:  MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEETADVLIQYVVLRRDLIDSWPLGSVVTQG
        M  VISAS+F FSISKST+LCS SR RV PSS L  RS NRNSN FSSASMSESAESNS PPPDD     E+ ADVLIQYVVLRRDLIDSWPLGSVVTQG
Subjt:  MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEETADVLIQYVVLRRDLIDSWPLGSVVTQG

Query:  CHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        CHASVSAIWLNK+DP T++YCSPHNIDSMHKVTLEVKGETQ+VNLSEKLK NSI HKLWIEQPENIPTCLATKPYPKSVVS FFKKLKLCK
Subjt:  CHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

A0A6J1KJQ6 Aminoacyl-tRNA hydrolase1.0e-7883.77Show/hide
Query:  MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEETADVLIQYVVLRRDLIDSWPLGSVVTQG
        M  VISAS+F FSIS S RLCSN+R   LPSS     S N NS  FSSASMSESAESNSV P DDGGAKAEE ADVL+QYVVLRRDLIDSWPLGSVVTQG
Subjt:  MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEETADVLIQYVVLRRDLIDSWPLGSVVTQG

Query:  CHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        CHASVSAIWLNK+DPHT++YCSP NIDSMHKVTLEVKGETQ+VNLSEKLKANSI+HKLW+EQPENIPTCLA+KPYPKSVVSPFFKKLKLCK
Subjt:  CHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK

SwissProt top hitse value%identityAlignment
D3Z4S3 Putative peptidyl-tRNA hydrolase PTRHD12.2e-2547.06Show/hide
Query:  VLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLAT
        +L+QY+VLR+DL     SWP G++V Q CHA+ +A+ L+++ PHT  Y     +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLAT

Query:  KPYPKSVVSPFFKKLKLCK
        +PYPK  VS + KK +L K
Subjt:  KPYPKSVVSPFFKKLKLCK

Q3SZ85 Putative peptidyl-tRNA hydrolase PTRHD12.4e-2749.58Show/hide
Query:  VLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLAT
        +L+QY+VLR+DL     SWP G+VV Q CHA+ +A+ L+++ PHT  Y     ++ M KV LE   ET +  L+E L+  +I HKLW+EQPENIPTC+A 
Subjt:  VLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLAT

Query:  KPYPKSVVSPFFKKLKLCK
        +PYPK  VS + KK +L K
Subjt:  KPYPKSVVSPFFKKLKLCK

Q6GMV3 Putative peptidyl-tRNA hydrolase PTRHD11.9e-2446.22Show/hide
Query:  VLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLAT
        VL+QY+VLR+DL     SWP G++V Q CHA+ +A+  +++ PHT  Y     +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLIQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLAT

Query:  KPYPKSVVSPFFKKLKLCK
        +PYPK  V  + KK +L K
Subjt:  KPYPKSVVSPFFKKLKLCK

Arabidopsis top hitse value%identityAlignment
AT5G10700.1 Peptidyl-tRNA hydrolase II (PTH2) family protein2.0e-5361.05Show/hide
Query:  TCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEETADVLIQYVVLRRDLIDSWPLGSVVTQGC
        T V+SA   AF     TR  S   PR+    F        +   F++AS S S ++  +    D  + AE+  DV++QYVVLRRDLIDSWPLGSVVTQGC
Subjt:  TCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEETADVLIQYVVLRRDLIDSWPLGSVVTQGC

Query:  HASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK
        HASV+AIW  K+DP T  YC P +IDSMHKVTLEVKGETQM+NLSEKLK   I HKLW+EQPENIPTC+ATKPYPKS VS FFKKLKLCK
Subjt:  HASVSAIWLNKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTGTGTAATTTCAGCTTCTCAATTCGCATTCTCCATTTCCAAATCCACGAGGCTCTGCTCAAATTCAAGGCCTAGAGTTCTCCCATCTTCTTTCCTGAGACCCCG
CTCTTCGAATCGAAATTCTAATCCATTTAGCTCTGCCTCCATGAGTGAATCCGCTGAAAGTAATTCTGTTCCTCCACCAGACGATGGCGGAGCGAAGGCAGAGGAGACAG
CCGATGTTTTGATTCAGTACGTGGTGCTCCGGAGAGATTTGATTGATTCGTGGCCGCTCGGTAGCGTCGTAACTCAGGGATGCCATGCTTCAGTCTCTGCCATTTGGTTG
AATAAAGAAGATCCTCACACTACTGACTACTGTAGTCCACACAATATCGATTCTATGCACAAGGTTACTCTAGAAGTCAAGGGAGAAACTCAGATGGTTAACTTGTCAGA
GAAACTTAAAGCAAACTCAATCATACATAAACTATGGATAGAACAACCAGAAAACATTCCAACATGTCTTGCCACAAAACCTTACCCCAAATCTGTTGTATCACCCTTTT
TTAAAAAGCTAAAACTCTGTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTTGTGTAATTTCAGCTTCTCAATTCGCATTCTCCATTTCCAAATCCACGAGGCTCTGCTCAAATTCAAGGCCTAGAGTTCTCCCATCTTCTTTCCTGAGACCCCG
CTCTTCGAATCGAAATTCTAATCCATTTAGCTCTGCCTCCATGAGTGAATCCGCTGAAAGTAATTCTGTTCCTCCACCAGACGATGGCGGAGCGAAGGCAGAGGAGACAG
CCGATGTTTTGATTCAGTACGTGGTGCTCCGGAGAGATTTGATTGATTCGTGGCCGCTCGGTAGCGTCGTAACTCAGGGATGCCATGCTTCAGTCTCTGCCATTTGGTTG
AATAAAGAAGATCCTCACACTACTGACTACTGTAGTCCACACAATATCGATTCTATGCACAAGGTTACTCTAGAAGTCAAGGGAGAAACTCAGATGGTTAACTTGTCAGA
GAAACTTAAAGCAAACTCAATCATACATAAACTATGGATAGAACAACCAGAAAACATTCCAACATGTCTTGCCACAAAACCTTACCCCAAATCTGTTGTATCACCCTTTT
TTAAAAAGCTAAAACTCTGTAAGTGA
Protein sequenceShow/hide protein sequence
MTCVISASQFAFSISKSTRLCSNSRPRVLPSSFLRPRSSNRNSNPFSSASMSESAESNSVPPPDDGGAKAEETADVLIQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWL
NKEDPHTTDYCSPHNIDSMHKVTLEVKGETQMVNLSEKLKANSIIHKLWIEQPENIPTCLATKPYPKSVVSPFFKKLKLCK