CuGenDBv2

Gene ID	HG10004663
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Tail fiber
Genome location	Chr08:19359186..19362516
RNA-Seq Expression	HG10004663
Synteny	HG10004663
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008445191.1 PREDICTED: uncharacterized protein LOC103488297 isoform X1 [Cucumis melo]

2.0e-104

94.39

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Query:  MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYN
        MATSTPSSTST+SKSW+RNLSS+ASR+YF LIILQIPLFRI CRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVP WSDLF+IYN
Subjt:  MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYN

Query:  LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPAR
        LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDP K+VYVYPTMILAVICAFSSVKYDVKK VR APAR
Subjt:  LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPAR

Query:  PIAKPLQSSSKSKL
        PIAKPLQSSSKSKL
Subjt:  PIAKPLQSSSKSKL

XP_008445192.1 PREDICTED: uncharacterized protein LOC103488297 isoform X2 [Cucumis melo]

6.8e-105

94.42

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Query:  MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYN
        MATSTPSSTST+SKSW+RNLSS+ASR+YF LIILQIPLFRI CRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVP WSDLF+IYN
Subjt:  MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYN

Query:  LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPAR
        LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDP K+VYVYPTMILAVICAFSSVKYDVKK VR APAR
Subjt:  LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPAR

Query:  PIAKPLQSSSKSKLK
        PIAKPLQSSSKSKLK
Subjt:  PIAKPLQSSSKSKLK

XP_008445193.1 PREDICTED: uncharacterized protein LOC103488297 isoform X4 [Cucumis melo]

6.8e-105

94.42

Show/hide

Query:  MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYN
        MATSTPSSTST+SKSW+RNLSS+ASR+YF LIILQIPLFRI CRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVP WSDLF+IYN
Subjt:  MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYN

Query:  LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPAR
        LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDP K+VYVYPTMILAVICAFSSVKYDVKK VR APAR
Subjt:  LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPAR

Query:  PIAKPLQSSSKSKLK
        PIAKPLQSSSKSKLK
Subjt:  PIAKPLQSSSKSKLK

XP_016900009.1 PREDICTED: uncharacterized protein LOC103488297 isoform X3 [Cucumis melo]

6.8e-105

94.42

Show/hide

Query:  MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYN
        MATSTPSSTST+SKSW+RNLSS+ASR+YF LIILQIPLFRI CRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVP WSDLF+IYN
Subjt:  MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYN

Query:  LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPAR
        LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDP K+VYVYPTMILAVICAFSSVKYDVKK VR APAR
Subjt:  LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPAR

Query:  PIAKPLQSSSKSKLK
        PIAKPLQSSSKSKLK
Subjt:  PIAKPLQSSSKSKLK

XP_038883986.1 uncharacterized protein LOC120074948 [Benincasa hispida]

2.0e-104

94.42

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Query:  MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYN
        MATST SSTS +SKSWIRNLSS+ASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGA+VNGLVMNLTVP W++LF+IYN
Subjt:  MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYN

Query:  LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPAR
        LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAK+VYVYPTMILAVICAFSSVKYDVKK VR APAR
Subjt:  LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPAR

Query:  PIAKPLQSSSKSKLK
        PIAKPLQSSSKSKLK
Subjt:  PIAKPLQSSSKSKLK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BC26 uncharacterized protein LOC103488297 isoform X1

9.6e-105

94.39

Show/hide

Query:  MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYN
        MATSTPSSTST+SKSW+RNLSS+ASR+YF LIILQIPLFRI CRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVP WSDLF+IYN
Subjt:  MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYN

Query:  LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPAR
        LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDP K+VYVYPTMILAVICAFSSVKYDVKK VR APAR
Subjt:  LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPAR

Query:  PIAKPLQSSSKSKL
        PIAKPLQSSSKSKL
Subjt:  PIAKPLQSSSKSKL

A0A1S3BC32 uncharacterized protein LOC103488297 isoform X2

3.3e-105

94.42

Show/hide

Query:  MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYN
        MATSTPSSTST+SKSW+RNLSS+ASR+YF LIILQIPLFRI CRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVP WSDLF+IYN
Subjt:  MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYN

Query:  LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPAR
        LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDP K+VYVYPTMILAVICAFSSVKYDVKK VR APAR
Subjt:  LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPAR

Query:  PIAKPLQSSSKSKLK
        PIAKPLQSSSKSKLK
Subjt:  PIAKPLQSSSKSKLK

A0A1S3BCZ0 uncharacterized protein LOC103488297 isoform X4

3.3e-105

94.42

Show/hide

Query:  MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYN
        MATSTPSSTST+SKSW+RNLSS+ASR+YF LIILQIPLFRI CRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVP WSDLF+IYN
Subjt:  MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYN

Query:  LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPAR
        LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDP K+VYVYPTMILAVICAFSSVKYDVKK VR APAR
Subjt:  LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPAR

Query:  PIAKPLQSSSKSKLK
        PIAKPLQSSSKSKLK
Subjt:  PIAKPLQSSSKSKLK

A0A1S4DVJ9 uncharacterized protein LOC103488297 isoform X3

3.3e-105

94.42

Show/hide

Query:  MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYN
        MATSTPSSTST+SKSW+RNLSS+ASR+YF LIILQIPLFRI CRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVP WSDLF+IYN
Subjt:  MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYN

Query:  LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPAR
        LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDP K+VYVYPTMILAVICAFSSVKYDVKK VR APAR
Subjt:  LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPAR

Query:  PIAKPLQSSSKSKLK
        PIAKPLQSSSKSKLK
Subjt:  PIAKPLQSSSKSKLK

A0A5A7VF29 Uncharacterized protein

3.3e-105

94.42

Show/hide

Query:  MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYN
        MATSTPSSTST+SKSW+RNLSS+ASR+YF LIILQIPLFRI CRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVP WSDLF+IYN
Subjt:  MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYN

Query:  LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPAR
        LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDP K+VYVYPTMILAVICAFSSVKYDVKK VR APAR
Subjt:  LTNIKEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPAR

Query:  PIAKPLQSSSKSKLK
        PIAKPLQSSSKSKLK
Subjt:  PIAKPLQSSSKSKLK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G80200.1 unknown protein

4.1e-31

34.96

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Query:  SSKSWIRNLSSVASRIYFFLIILQIPLFR-----------------------------IPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNG
        S K W   +S +AS ++  LI+ QIPLFR                             + CR+  C TPL V SS+LIA+++ P+ +VK LLYPGA+   
Subjt:  SSKSWIRNLSSVASRIYFFLIILQIPLFR-----------------------------IPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNG

Query:  LVMNLTVPGWSDLFNIYNLTNI-KEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVN---TDPAKSVYVYPTMILA
        L     +P +  LF  Y+   + + +S  TD+  LEV AGS   + GA + L KP R++  GTLL+ WGL+++ +L    +   +    SV VYPT+ LA
Subjt:  LVMNLTVPGWSDLFNIYNLTNI-KEASAVTDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVN---TDPAKSVYVYPTMILA

Query:  VICAFSSVKYDVKKAVRSAPARPIAK
         + AF S++ DV+K +R   +  ++K
Subjt:  VICAFSSVKYDVKKAVRSAPARPIAK

AT5G11280.1 unknown protein

4.6e-91

78.33

Show/hide

Query:  SKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYNLTNIKEASAVTD
        SK WI+  +S+AS +YF LI+ QIPLFR+PCRSGMC++P+HVTSSQLI+SE+FP P++KALLYPGAVVNGL +N+T P W ++ +IYNLTN+KEASAVTD
Subjt:  SKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYNLTNIKEASAVTD

Query:  LQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPARPIAKPLQSSSKS
        LQRLEVLAGSYFSVAGAFVGLLKPGRMSMFG+LL++WGLVKEGILGKPVNTDPAK+VYVYPTM+LA+ICAFS +KYD++KA R+APARPIAKPL SSSKS
Subjt:  LQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPARPIAKPLQSSSKS

Query:  KLK
        KLK
Subjt:  KLK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCAACCTCTACGCCATCGTCGACATCAACATCATCAAAGAGTTGGATCAGAAATCTTTCTTCAGTTGCATCTCGTATCTATTTCTTCCTTATCATACTTCAGATCCC
TCTCTTCAGGATCCCATGCAGATCTGGCATGTGTACAACCCCTTTGCACGTAACTTCATCCCAGTTAATTGCAAGTGAAGTCTTTCCAGCACCTGTAGTTAAGGCACTTC
TCTATCCTGGAGCAGTTGTGAATGGCCTTGTCATGAACTTGACTGTTCCTGGCTGGAGCGATCTGTTCAACATCTATAATTTGACCAACATTAAGGAAGCCTCTGCTGTG
ACTGATCTTCAACGCTTAGAGGTTCTTGCGGGAAGCTATTTCTCAGTGGCTGGAGCATTTGTGGGTCTTTTGAAGCCCGGGAGGATGAGCATGTTTGGAACTCTGTTGGT
AATTTGGGGTCTTGTTAAGGAAGGAATTCTGGGAAAACCTGTGAACACAGATCCTGCGAAATCTGTTTATGTTTATCCTACAATGATTCTTGCGGTGATCTGTGCTTTCT
CATCGGTTAAGTATGATGTGAAGAAGGCAGTTAGAAGTGCCCCTGCTCGACCAATTGCAAAGCCCCTTCAAAGCTCATCAAAATCTAAGCTTAAGTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MATSTPSSTSTSSKSWIRNLSSVASRIYFFLIILQIPLFRIPCRSGMCTTPLHVTSSQLIASEVFPAPVVKALLYPGAVVNGLVMNLTVPGWSDLFNIYNLTNIKEASAV
TDLQRLEVLAGSYFSVAGAFVGLLKPGRMSMFGTLLVIWGLVKEGILGKPVNTDPAKSVYVYPTMILAVICAFSSVKYDVKKAVRSAPARPIAKPLQSSSKSKLK

HG10004663 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome