; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004667 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004667
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationChr08:19387562..19390861
RNA-Seq ExpressionHG10004667
SyntenyHG10004667
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR032867 - DYW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064932.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]6.5e-6734.58Show/hide
Query:  SSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSL
        SSTTNPRAAEQNCLALLQACNALPKLTQIHTHI+KLGLHNNPLVLTKFASISS IHATDYAA FLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKAL+L
Subjt:  SSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSL

Query:  Y---------------------------------------------------------------------------------------------------
        Y                                                                                                   
Subjt:  Y---------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------------EIYEMVDEMGREMKKSGYRPST
                                                                                      EIYEMVDEMGREMKKSGYRPST
Subjt:  ------------------------------------------------------------------------------EIYEMVDEMGREMKKSGYRPST

Query:  SEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW
        SEVLLDINEEDKED+LNRHSEKLAIAFGLL TPPGTPIRIVKNLRVC+DCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW
Subjt:  SEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW

XP_004138859.1 pentatricopeptide repeat-containing protein At4g21065 [Cucumis sativus]1.2e-6534.24Show/hide
Query:  SSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSL
        SST NPRA EQNCLALLQACNALPKLTQIHTHI+KLGLHNNPLVLTKFASISS IHATDYAA FLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKAL+L
Subjt:  SSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSL

Query:  Y---------------------------------------------------------------------------------------------------
        Y                                                                                                   
Subjt:  Y---------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------------EIYEMVDEMGREMKKSGYRPST
                                                                                      EIYEMVDEMGREMKKSGYRPST
Subjt:  ------------------------------------------------------------------------------EIYEMVDEMGREMKKSGYRPST

Query:  SEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW
        SEVLLDINEEDKED+LNRHSEKLAIAFGLL TPPGTPIRIVKNLRVC+DCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW
Subjt:  SEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW

XP_008445200.1 PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Cucumis melo]5.0e-6734.58Show/hide
Query:  SSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSL
        SSTTNPRAAEQNCLALLQACNALPKLTQIHTHI+KLGLHNNPLVLTKFASISS IHATDYAA FLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKAL+L
Subjt:  SSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSL

Query:  Y---------------------------------------------------------------------------------------------------
        Y                                                                                                   
Subjt:  Y---------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------------EIYEMVDEMGREMKKSGYRPST
                                                                                      EIYEMVDEMGREMKKSGYRPST
Subjt:  ------------------------------------------------------------------------------EIYEMVDEMGREMKKSGYRPST

Query:  SEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW
        SEVLLDINEEDKED+LNRHSEKLAIAFGLL TPPGTPIRIVKNLRVC+DCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW
Subjt:  SEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW

XP_023537014.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo]7.7e-6032.65Show/hide
Query:  SSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSL
        +S +NPRAAEQNCLALLQACN+LPKLTQIH HI KLGLHNNPLVLTKFASISS I+ATDYAA FLFSAEADTRLYDAFLFNTLIRA+AQTGHSK +ALSL
Subjt:  SSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSL

Query:  Y---------------------------------------------------------------------------------------------------
        Y                                                                                                   
Subjt:  Y---------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------EIYEMVDEMGREMKKSGYRPS
                                                                                       EIY MVDEMGREM KSGYRPS
Subjt:  -------------------------------------------------------------------------------EIYEMVDEMGREMKKSGYRPS

Query:  TSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW
        TSEVLLDINEEDKEDTLNRHSEKLAIAFGLL+TPPGTPIRIVKNLRVC+DCHSASKFISKIYDREIIMRDRNRFHHFK G CSCGDFW
Subjt:  TSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW

XP_038884201.1 pentatricopeptide repeat-containing protein At4g21065-like [Benincasa hispida]4.2e-6634.35Show/hide
Query:  VSSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALS
        V+STTNPRAAEQNCLALLQACNALPKLTQIHTHI+KLGLHNNPLVLTKFASISS IHATDYAA FLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALS
Subjt:  VSSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALS

Query:  LY--------------------------------------------------------------------------------------------------
        LY                                                                                                  
Subjt:  LY--------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------EIYEMVDEMGREMKKSGYRPS
                                                                                       EIYEMVDEMGREMKKSGYRPS
Subjt:  -------------------------------------------------------------------------------EIYEMVDEMGREMKKSGYRPS

Query:  TSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW
        TSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVC+DCHSASK+IS IY+REIIMRDRNRFHHFKSG CSCGDFW
Subjt:  TSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW

TrEMBL top hitse value%identityAlignment
A0A0A0LQ71 DYW_deaminase domain-containing protein5.9e-6634.24Show/hide
Query:  SSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSL
        SST NPRA EQNCLALLQACNALPKLTQIHTHI+KLGLHNNPLVLTKFASISS IHATDYAA FLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKAL+L
Subjt:  SSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSL

Query:  Y---------------------------------------------------------------------------------------------------
        Y                                                                                                   
Subjt:  Y---------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------------EIYEMVDEMGREMKKSGYRPST
                                                                                      EIYEMVDEMGREMKKSGYRPST
Subjt:  ------------------------------------------------------------------------------EIYEMVDEMGREMKKSGYRPST

Query:  SEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW
        SEVLLDINEEDKED+LNRHSEKLAIAFGLL TPPGTPIRIVKNLRVC+DCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW
Subjt:  SEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW

A0A1S3BC37 pentatricopeptide repeat-containing protein At4g21065-like2.4e-6734.58Show/hide
Query:  SSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSL
        SSTTNPRAAEQNCLALLQACNALPKLTQIHTHI+KLGLHNNPLVLTKFASISS IHATDYAA FLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKAL+L
Subjt:  SSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSL

Query:  Y---------------------------------------------------------------------------------------------------
        Y                                                                                                   
Subjt:  Y---------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------------EIYEMVDEMGREMKKSGYRPST
                                                                                      EIYEMVDEMGREMKKSGYRPST
Subjt:  ------------------------------------------------------------------------------EIYEMVDEMGREMKKSGYRPST

Query:  SEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW
        SEVLLDINEEDKED+LNRHSEKLAIAFGLL TPPGTPIRIVKNLRVC+DCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW
Subjt:  SEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW

A0A5A7V9A4 Pentatricopeptide repeat-containing protein3.1e-6734.58Show/hide
Query:  SSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSL
        SSTTNPRAAEQNCLALLQACNALPKLTQIHTHI+KLGLHNNPLVLTKFASISS IHATDYAA FLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKAL+L
Subjt:  SSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSL

Query:  Y---------------------------------------------------------------------------------------------------
        Y                                                                                                   
Subjt:  Y---------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------------------------------------EIYEMVDEMGREMKKSGYRPST
                                                                                      EIYEMVDEMGREMKKSGYRPST
Subjt:  ------------------------------------------------------------------------------EIYEMVDEMGREMKKSGYRPST

Query:  SEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW
        SEVLLDINEEDKED+LNRHSEKLAIAFGLL TPPGTPIRIVKNLRVC+DCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW
Subjt:  SEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW

A0A6J1BQ70 pentatricopeptide repeat-containing protein At4g21065-like3.7e-6032.83Show/hide
Query:  RTKELLEEWCLWVSSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAY
        +TK LL      V S  NPRAAEQ+CLALLQACNALPKL QIH HI+KLGLHNNPLVLTKFASISS I ATDYAA FLFSA ADTRLYDAFLFNTLIRAY
Subjt:  RTKELLEEWCLWVSSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAY

Query:  AQTGHSKDKALSLY--------------------------------------------------------------------------------------
        AQTGHSK KAL+LY                                                                                      
Subjt:  AQTGHSKDKALSLY--------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------------------EIYEMVDEM
                                                                                                   EIYEMVDEM
Subjt:  -------------------------------------------------------------------------------------------EIYEMVDEM

Query:  GREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW
        GREMKKSGYRPSTSEVLLDINEEDKEDTLNRH EKLAIAFGLL+TPPGTPIRIVKNLRVC+DCHSASKFISKIYDREIIMRDRNRFHHFK+G CSCGDFW
Subjt:  GREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW

A0A6J1KQ01 pentatricopeptide repeat-containing protein At4g21065-like1.8e-5932.48Show/hide
Query:  SSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSL
        +S +NPRAAEQNCLALLQACN LPKLTQIH HI KLGLHNNPLVLTKF SISS I+ATDYAA FLFSAEADTRLYDAFLFNTLIRA+AQTGHSK +ALSL
Subjt:  SSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADTRLYDAFLFNTLIRAYAQTGHSKDKALSL

Query:  Y---------------------------------------------------------------------------------------------------
        Y                                                                                                   
Subjt:  Y---------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -------------------------------------------------------------------------------EIYEMVDEMGREMKKSGYRPS
                                                                                       EIY MVDEMGREM KSGYRPS
Subjt:  -------------------------------------------------------------------------------EIYEMVDEMGREMKKSGYRPS

Query:  TSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW
        TSEVLLDINEEDKEDTLNRHSEKLAIAFGLL+TPPGTPIRIVKNLRVC DCHSASKFISKIYDREIIMRDRNRFHHFK+G CSCGDFW
Subjt:  TSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSGQCSCGDFW

SwissProt top hitse value%identityAlignment
Q683I9 Pentatricopeptide repeat-containing protein At3g628906.2e-3661.11Show/hide
Query:  IYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSG
        IY M+DE+ + ++++GY   T EVLLD+NE+DKE  L+ HSEKLAIAF L+ T PGTP+RI+KNLR+C DCH   K ISK++ REI++RD NRFHHF+ G
Subjt:  IYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSG

Query:  QCSCGDFW
         CSC DFW
Subjt:  QCSCGDFW

Q9FI80 Pentatricopeptide repeat-containing protein At5g489101.8e-3560.55Show/hide
Query:  EIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKS
        EI  M+ E+  +++ +GYRP T++VLL++ EEDKE+ L+ HSEK+A AFGL+ST PG PIRIVKNLR+C DCHS+ K ISK+Y R+I +RDR RFHHF+ 
Subjt:  EIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKS

Query:  GQCSCGDFW
        G CSC D+W
Subjt:  GQCSCGDFW

Q9LN01 Pentatricopeptide repeat-containing protein At1g08070, chloroplastic2.3e-3564.22Show/hide
Query:  EIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKS
        EIY M++EM   ++K+G+ P TSEVL ++ EE KE  L  HSEKLAIAFGL+ST PGT + IVKNLRVC +CH A+K ISKIY REII RDR RFHHF+ 
Subjt:  EIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKS

Query:  GQCSCGDFW
        G CSC D+W
Subjt:  GQCSCGDFW

Q9SMZ2 Pentatricopeptide repeat-containing protein At4g331701.1e-3762.96Show/hide
Query:  IYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSG
        IY  V +M R++K+ GY P T   L+D+ EE+KE  L  HSEKLA+AFGLLSTPP TPIR++KNLRVC DCH+A K+I+K+Y+REI++RD NRFH FK G
Subjt:  IYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSG

Query:  QCSCGDFW
         CSCGD+W
Subjt:  QCSCGDFW

Q9SZT8 Pentatricopeptide repeat-containing protein ELI1, chloroplastic6.2e-3657.98Show/hide
Query:  HSKDKALSLYEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMR
        HSK K     EIY M+ ++   +K  GY P+T+ VL D+ E +KE +L  HSE+LAIA+GL+ST PG+P++I KNLRVC+DCH+ +K ISKI  R+I+MR
Subjt:  HSKDKALSLYEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMR

Query:  DRNRFHHFKSGQCSCGDFW
        DRNRFHHF  G CSCGDFW
Subjt:  DRNRFHHFKSGQCSCGDFW

Arabidopsis top hitse value%identityAlignment
AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.7e-3664.22Show/hide
Query:  EIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKS
        EIY M++EM   ++K+G+ P TSEVL ++ EE KE  L  HSEKLAIAFGL+ST PGT + IVKNLRVC +CH A+K ISKIY REII RDR RFHHF+ 
Subjt:  EIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKS

Query:  GQCSCGDFW
        G CSC D+W
Subjt:  GQCSCGDFW

AT3G62890.1 Pentatricopeptide repeat (PPR) superfamily protein4.4e-3761.11Show/hide
Query:  IYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSG
        IY M+DE+ + ++++GY   T EVLLD+NE+DKE  L+ HSEKLAIAF L+ T PGTP+RI+KNLR+C DCH   K ISK++ REI++RD NRFHHF+ G
Subjt:  IYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSG

Query:  QCSCGDFW
         CSC DFW
Subjt:  QCSCGDFW

AT4G33170.1 Tetratricopeptide repeat (TPR)-like superfamily protein8.0e-3962.96Show/hide
Query:  IYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSG
        IY  V +M R++K+ GY P T   L+D+ EE+KE  L  HSEKLA+AFGLLSTPP TPIR++KNLRVC DCH+A K+I+K+Y+REI++RD NRFH FK G
Subjt:  IYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKSG

Query:  QCSCGDFW
         CSCGD+W
Subjt:  QCSCGDFW

AT4G37380.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.4e-3757.98Show/hide
Query:  HSKDKALSLYEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMR
        HSK K     EIY M+ ++   +K  GY P+T+ VL D+ E +KE +L  HSE+LAIA+GL+ST PG+P++I KNLRVC+DCH+ +K ISKI  R+I+MR
Subjt:  HSKDKALSLYEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMR

Query:  DRNRFHHFKSGQCSCGDFW
        DRNRFHHF  G CSCGDFW
Subjt:  DRNRFHHFKSGQCSCGDFW

AT5G48910.1 Pentatricopeptide repeat (PPR) superfamily protein1.3e-3660.55Show/hide
Query:  EIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKS
        EI  M+ E+  +++ +GYRP T++VLL++ EEDKE+ L+ HSEK+A AFGL+ST PG PIRIVKNLR+C DCHS+ K ISK+Y R+I +RDR RFHHF+ 
Subjt:  EIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISKIYDREIIMRDRNRFHHFKS

Query:  GQCSCGDFW
        G CSC D+W
Subjt:  GQCSCGDFW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGAAGCACCATTTAAATTTAAAGAAAAATTATATGAAGGTATACTAGAGGGTAATCGGGTCAACTCGAAAAGGACAAAGGAGTTACTAGAAGAATGGTGTTTGTG
GGTATCTTCTACAACTAACCCTCGTGCAGCGGAGCAGAACTGTTTAGCCCTGCTTCAGGCCTGTAACGCGCTACCGAAGCTCACCCAAATCCATACTCACATTATCAAGT
TGGGCCTCCACAACAACCCGCTCGTTCTCACCAAATTCGCCTCCATTTCTTCTTTTATTCATGCTACTGATTATGCTGCCTGTTTCTTGTTCTCTGCCGAAGCTGATACT
CGGCTTTACGATGCGTTTCTTTTCAATACCCTCATCAGAGCCTATGCTCAAACTGGTCACTCGAAGGACAAAGCCTTGTCTTTGTACGAAATCTATGAAATGGTGGATGA
GATGGGGAGAGAAATGAAGAAATCTGGATATCGTCCTTCGACATCGGAGGTTTTGCTCGATATCAACGAAGAGGACAAAGAAGATACTTTGAATAGACATAGTGAAAAAC
TAGCGATTGCATTTGGGCTTCTTAGTACTCCACCAGGAACTCCGATTCGAATCGTAAAGAATTTGCGAGTTTGCAACGATTGCCACTCCGCTTCCAAGTTCATCTCTAAG
ATTTATGATCGCGAAATCATAATGAGAGACCGCAACCGGTTTCACCACTTCAAGTCTGGGCAGTGCTCATGTGGAGATTTCTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGAAGCACCATTTAAATTTAAAGAAAAATTATATGAAGGTATACTAGAGGGTAATCGGGTCAACTCGAAAAGGACAAAGGAGTTACTAGAAGAATGGTGTTTGTG
GGTATCTTCTACAACTAACCCTCGTGCAGCGGAGCAGAACTGTTTAGCCCTGCTTCAGGCCTGTAACGCGCTACCGAAGCTCACCCAAATCCATACTCACATTATCAAGT
TGGGCCTCCACAACAACCCGCTCGTTCTCACCAAATTCGCCTCCATTTCTTCTTTTATTCATGCTACTGATTATGCTGCCTGTTTCTTGTTCTCTGCCGAAGCTGATACT
CGGCTTTACGATGCGTTTCTTTTCAATACCCTCATCAGAGCCTATGCTCAAACTGGTCACTCGAAGGACAAAGCCTTGTCTTTGTACGAAATCTATGAAATGGTGGATGA
GATGGGGAGAGAAATGAAGAAATCTGGATATCGTCCTTCGACATCGGAGGTTTTGCTCGATATCAACGAAGAGGACAAAGAAGATACTTTGAATAGACATAGTGAAAAAC
TAGCGATTGCATTTGGGCTTCTTAGTACTCCACCAGGAACTCCGATTCGAATCGTAAAGAATTTGCGAGTTTGCAACGATTGCCACTCCGCTTCCAAGTTCATCTCTAAG
ATTTATGATCGCGAAATCATAATGAGAGACCGCAACCGGTTTCACCACTTCAAGTCTGGGCAGTGCTCATGTGGAGATTTCTGGTGA
Protein sequenceShow/hide protein sequence
MIEAPFKFKEKLYEGILEGNRVNSKRTKELLEEWCLWVSSTTNPRAAEQNCLALLQACNALPKLTQIHTHIIKLGLHNNPLVLTKFASISSFIHATDYAACFLFSAEADT
RLYDAFLFNTLIRAYAQTGHSKDKALSLYEIYEMVDEMGREMKKSGYRPSTSEVLLDINEEDKEDTLNRHSEKLAIAFGLLSTPPGTPIRIVKNLRVCNDCHSASKFISK
IYDREIIMRDRNRFHHFKSGQCSCGDFW