; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004669 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004669
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPlant protein of unknown function (DUF247)
Genome locationChr08:19407867..19408541
RNA-Seq ExpressionHG10004669
SyntenyHG10004669
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004158 - Protein of unknown function DUF247, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064930.1 UPF0481 protein [Cucumis melo var. makuwa]2.2e-5871.86Show/hide
Query:  MEVNNASDESNKDTTKSRDEEIKAIHDQMVKCVDHSMFRELPKSWSFCKERSIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNF
        ME+NN +DESN + TKSRDEEIK I+D+MV+ V+HS+ RE+  S SF +ERSIYMVPK LRN NPKAY+PQVISIGPLHY  T +DLTI EKK SYVLNF
Subjt:  MEVNNASDESNKDTTKSRDEEIKAIHDQMVKCVDHSMFRELPKSWSFCKERSIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNF

Query:  LTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMYIIGSMVEEFRDLTRRF
        LTVAKL WN MI KF+ WEE+ARNYYVE +++ERD+F++LLIYD CFVVMYIIGSMV EFRDL   F
Subjt:  LTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMYIIGSMVEEFRDLTRRF

XP_004138858.1 UPF0481 protein At3g47200 [Cucumis sativus]3.0e-5570.83Show/hide
Query:  MEVNNASDESNKDTTKSRDEEIKAIHDQMVKCVDHSMFRELPKS-WSFCKERSIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLN
        ME+ N  DESN +TTKSRDEEIK I+D+MV  V+ SMFRE+ +S  SF KERSIYMVPK LR  NPKAY+PQVISIGPLHY  T +DL I EKK SYVLN
Subjt:  MEVNNASDESNKDTTKSRDEEIKAIHDQMVKCVDHSMFRELPKS-WSFCKERSIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLN

Query:  FLTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMYIIGSMVEEFRDLTRRF
        FLTVAKL+WN MI KF+ WEE+ARNYYVE +E++RD+F++LLIYD CFVVMY+IGSMV EFRDL   F
Subjt:  FLTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMYIIGSMVEEFRDLTRRF

XP_008445209.1 PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo]2.9e-5871.86Show/hide
Query:  MEVNNASDESNKDTTKSRDEEIKAIHDQMVKCVDHSMFRELPKSWSFCKERSIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNF
        ME+NN  DESN + TKSRDEEIK I+D+MV+ V+HS+ RE+  S SF +ERSIYMVPK LRN NPKAY+PQVISIGPLHY  T +DLTI EKK SYVLNF
Subjt:  MEVNNASDESNKDTTKSRDEEIKAIHDQMVKCVDHSMFRELPKSWSFCKERSIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNF

Query:  LTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMYIIGSMVEEFRDLTRRF
        LTVAKL WN MI KF+ WEE+ARNYYVE +++ERD+F++LLIYD CFVVMYIIGSMV EFRDL   F
Subjt:  LTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMYIIGSMVEEFRDLTRRF

XP_022961896.1 UPF0481 protein At3g47200-like isoform X2 [Cucurbita moschata]3.7e-2141.28Show/hide
Query:  SIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNFLTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMY
        +IY VP+ LR++ P+AYTP VISIGPLH  S   DLT    K  Y+ NFL + KL  N ++     WE++AR  Y E +E+ RD+FV+LL++DGCFVVM+
Subjt:  SIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNFLTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMY

Query:  IIGSMVEEFR--DLTR--RFYGNSAMEYSKIFFCLKTNFLSSFSKLFTTYAPLLNLHSNKPLSLNYFVDILR
        +IG    E R  D++   +F+     +   +   L    L S   L  +  PLL     K + +N+FVD+LR
Subjt:  IIGSMVEEFR--DLTR--RFYGNSAMEYSKIFFCLKTNFLSSFSKLFTTYAPLLNLHSNKPLSLNYFVDILR

XP_022961897.1 UPF0481 protein At3g47200-like isoform X3 [Cucurbita moschata]5.4e-2050Show/hide
Query:  SIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNFLTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMY
        +IY VP+ LR++ P+AYTP VISIGPLH  S   DLT    K  Y+ NFL + KL  N ++     WE++AR  Y E +E+ RD+FV+LL++DGCFVVM+
Subjt:  SIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNFLTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMY

Query:  IIGSMVEEFR
        +IG    E R
Subjt:  IIGSMVEEFR

TrEMBL top hitse value%identityAlignment
A0A0A0LPK8 Uncharacterized protein1.5e-5570.83Show/hide
Query:  MEVNNASDESNKDTTKSRDEEIKAIHDQMVKCVDHSMFRELPKS-WSFCKERSIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLN
        ME+ N  DESN +TTKSRDEEIK I+D+MV  V+ SMFRE+ +S  SF KERSIYMVPK LR  NPKAY+PQVISIGPLHY  T +DL I EKK SYVLN
Subjt:  MEVNNASDESNKDTTKSRDEEIKAIHDQMVKCVDHSMFRELPKS-WSFCKERSIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLN

Query:  FLTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMYIIGSMVEEFRDLTRRF
        FLTVAKL+WN MI KF+ WEE+ARNYYVE +E++RD+F++LLIYD CFVVMY+IGSMV EFRDL   F
Subjt:  FLTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMYIIGSMVEEFRDLTRRF

A0A1S3BD00 UPF0481 protein At3g47200-like1.4e-5871.86Show/hide
Query:  MEVNNASDESNKDTTKSRDEEIKAIHDQMVKCVDHSMFRELPKSWSFCKERSIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNF
        ME+NN  DESN + TKSRDEEIK I+D+MV+ V+HS+ RE+  S SF +ERSIYMVPK LRN NPKAY+PQVISIGPLHY  T +DLTI EKK SYVLNF
Subjt:  MEVNNASDESNKDTTKSRDEEIKAIHDQMVKCVDHSMFRELPKSWSFCKERSIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNF

Query:  LTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMYIIGSMVEEFRDLTRRF
        LTVAKL WN MI KF+ WEE+ARNYYVE +++ERD+F++LLIYD CFVVMYIIGSMV EFRDL   F
Subjt:  LTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMYIIGSMVEEFRDLTRRF

A0A5A7VCL1 UPF0481 protein1.1e-5871.86Show/hide
Query:  MEVNNASDESNKDTTKSRDEEIKAIHDQMVKCVDHSMFRELPKSWSFCKERSIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNF
        ME+NN +DESN + TKSRDEEIK I+D+MV+ V+HS+ RE+  S SF +ERSIYMVPK LRN NPKAY+PQVISIGPLHY  T +DLTI EKK SYVLNF
Subjt:  MEVNNASDESNKDTTKSRDEEIKAIHDQMVKCVDHSMFRELPKSWSFCKERSIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNF

Query:  LTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMYIIGSMVEEFRDLTRRF
        LTVAKL WN MI KF+ WEE+ARNYYVE +++ERD+F++LLIYD CFVVMYIIGSMV EFRDL   F
Subjt:  LTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMYIIGSMVEEFRDLTRRF

A0A6J1HBC3 UPF0481 protein At3g47200-like isoform X32.6e-2050Show/hide
Query:  SIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNFLTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMY
        +IY VP+ LR++ P+AYTP VISIGPLH  S   DLT    K  Y+ NFL + KL  N ++     WE++AR  Y E +E+ RD+FV+LL++DGCFVVM+
Subjt:  SIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNFLTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMY

Query:  IIGSMVEEFR
        +IG    E R
Subjt:  IIGSMVEEFR

A0A6J1HBL7 UPF0481 protein At3g47200-like isoform X21.8e-2141.28Show/hide
Query:  SIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNFLTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMY
        +IY VP+ LR++ P+AYTP VISIGPLH  S   DLT    K  Y+ NFL + KL  N ++     WE++AR  Y E +E+ RD+FV+LL++DGCFVVM+
Subjt:  SIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNFLTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMY

Query:  IIGSMVEEFR--DLTR--RFYGNSAMEYSKIFFCLKTNFLSSFSKLFTTYAPLLNLHSNKPLSLNYFVDILR
        +IG    E R  D++   +F+     +   +   L    L S   L  +  PLL     K + +N+FVD+LR
Subjt:  IIGSMVEEFR--DLTR--RFYGNSAMEYSKIFFCLKTNFLSSFSKLFTTYAPLLNLHSNKPLSLNYFVDILR

SwissProt top hitse value%identityAlignment
Q9SD53 UPF0481 protein At3g472005.8e-0934.62Show/hide
Query:  IYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNFLTVAK---LNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVV
        I+ VP+S   +NPKAY P+V+SIGP HY      + I + K   +  FL  AK   +  N ++   +D E+K R  Y E ++    D + +++ DGCF++
Subjt:  IYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNFLTVAK---LNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVV

Query:  MYII
        M  +
Subjt:  MYII

Arabidopsis top hitse value%identityAlignment
AT3G47210.1 Plant protein of unknown function (DUF247)3.6e-1434.65Show/hide
Query:  IYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNFLTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMYI
        I+ VPKS   +NP+AY P+V+SIGP H+     ++ I + K+ ++  FL  A ++ + +    +DWE++ R  Y E +E    + V ++I DGCF++M +
Subjt:  IYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNFLTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMYI

Query:  I
        +
Subjt:  I

AT3G47250.1 Plant protein of unknown function (DUF247)1.7e-1134.62Show/hide
Query:  IYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNFL---TVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVV
        I+ +P SL  VNPKAY P+V+SIGP HY      + I + K  ++  F+   T   ++ N +       + K R  Y E + IE+ + V ++I DGCF++
Subjt:  IYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNFL---TVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVV

Query:  MYII
        M ++
Subjt:  MYII

AT3G47250.2 Plant protein of unknown function (DUF247)1.7e-1134.62Show/hide
Query:  IYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNFL---TVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVV
        I+ +P SL  VNPKAY P+V+SIGP HY      + I + K  ++  F+   T   ++ N +       + K R  Y E + IE+ + V ++I DGCF++
Subjt:  IYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNFL---TVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVV

Query:  MYII
        M ++
Subjt:  MYII

AT4G31980.1 unknown protein7.7e-1736.07Show/hide
Query:  IYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIE-KKVSYVLNFLTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMY
        IY VP  LR +NP AYTP+++S GPLH      +L  +E +K  Y+L+F+     +   ++     WE+ AR+ Y E +++  D+FV++L+ DG F+V  
Subjt:  IYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIE-KKVSYVLNFLTVAKLNWNAMIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMY

Query:  IIGSMVEEFRDLTRRFYGNSAM
        ++ S     R    R +GNS M
Subjt:  IIGSMVEEFRDLTRRFYGNSAM

AT5G22550.2 Plant protein of unknown function (DUF247)3.0e-1335.04Show/hide
Query:  IYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEK-KVSYVLNFLTVAKLNWNAMIGKFID----WEEKARNYYVEPMEIERDDFVKLLIYDGCF
        IY +P +L+ VN KAY P+++SIGP H++S    L +IE+ K  Y+  F++  K N   +I   +D     E+K R+ Y E +E  +   +K+++ DGCF
Subjt:  IYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEK-KVSYVLNFLTVAKLNWNAMIGKFID----WEEKARNYYVEPMEIERDDFVKLLIYDGCF

Query:  VVM-YIIGSMVEEFRDL
        ++M +++ S   E+ +L
Subjt:  VVM-YIIGSMVEEFRDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTCAACAATGCTAGTGACGAATCAAATAAGGATACTACTAAATCAAGAGATGAAGAAATCAAAGCGATTCATGATCAAATGGTAAAATGCGTTGACCATTCAAT
GTTTCGAGAACTTCCAAAAAGTTGGTCATTTTGTAAGGAACGTAGCATATACATGGTTCCCAAGTCTTTGCGCAATGTAAACCCAAAAGCTTATACTCCCCAAGTTATTT
CCATTGGGCCTCTTCATTATAATAGCACTCCAAGTGATCTGACCATTATAGAGAAAAAGGTCAGCTATGTTCTAAACTTTCTTACTGTTGCAAAGCTCAATTGGAATGCG
ATGATAGGAAAATTTATAGATTGGGAAGAAAAAGCTCGCAACTATTACGTCGAACCTATGGAAATAGAAAGAGATGACTTTGTTAAACTTCTAATCTATGACGGTTGTTT
CGTGGTTATGTATATCATTGGTTCTATGGTCGAGGAGTTTCGCGACCTCACACGACGTTTTTATGGAAATTCAGCAATGGAATATTCAAAGATCTTCTTTTGCTTGAAAA
CCAACTTCCTTTCTTCCTTCTCCAAGCTCTTTACGACTTATGCGCCTCTTCTCAACCTTCACTCAAACAAACCTCTTTCACTAAACTACTTCGTGGATATTTTAAGAAAG
CTCATGAAGGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTCAACAATGCTAGTGACGAATCAAATAAGGATACTACTAAATCAAGAGATGAAGAAATCAAAGCGATTCATGATCAAATGGTAAAATGCGTTGACCATTCAAT
GTTTCGAGAACTTCCAAAAAGTTGGTCATTTTGTAAGGAACGTAGCATATACATGGTTCCCAAGTCTTTGCGCAATGTAAACCCAAAAGCTTATACTCCCCAAGTTATTT
CCATTGGGCCTCTTCATTATAATAGCACTCCAAGTGATCTGACCATTATAGAGAAAAAGGTCAGCTATGTTCTAAACTTTCTTACTGTTGCAAAGCTCAATTGGAATGCG
ATGATAGGAAAATTTATAGATTGGGAAGAAAAAGCTCGCAACTATTACGTCGAACCTATGGAAATAGAAAGAGATGACTTTGTTAAACTTCTAATCTATGACGGTTGTTT
CGTGGTTATGTATATCATTGGTTCTATGGTCGAGGAGTTTCGCGACCTCACACGACGTTTTTATGGAAATTCAGCAATGGAATATTCAAAGATCTTCTTTTGCTTGAAAA
CCAACTTCCTTTCTTCCTTCTCCAAGCTCTTTACGACTTATGCGCCTCTTCTCAACCTTCACTCAAACAAACCTCTTTCACTAAACTACTTCGTGGATATTTTAAGAAAG
CTCATGAAGGAATGA
Protein sequenceShow/hide protein sequence
MEVNNASDESNKDTTKSRDEEIKAIHDQMVKCVDHSMFRELPKSWSFCKERSIYMVPKSLRNVNPKAYTPQVISIGPLHYNSTPSDLTIIEKKVSYVLNFLTVAKLNWNA
MIGKFIDWEEKARNYYVEPMEIERDDFVKLLIYDGCFVVMYIIGSMVEEFRDLTRRFYGNSAMEYSKIFFCLKTNFLSSFSKLFTTYAPLLNLHSNKPLSLNYFVDILRK
LMKE