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HG10004670 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004670
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPlant protein of unknown function (DUF247)
Genome locationChr08:19408922..19409245
RNA-Seq ExpressionHG10004670
SyntenyHG10004670
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004158 - Protein of unknown function DUF247, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064930.1 UPF0481 protein [Cucumis melo var. makuwa]1.1e-4282.24Show/hide
Query:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVA
        MHFLINT KDVSLLV+DG IQNHLGST+EIV LFN LCKN++VERNLY+ EC KMKEYCKHRRHRWMT+LKRDYFGTPWAFISFV A +LLLLTLLQTV 
Subjt:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVA

Query:  SVIALYK
        + +ALYK
Subjt:  SVIALYK

XP_004138858.1 UPF0481 protein At3g47200 [Cucumis sativus]1.2e-4179.44Show/hide
Query:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVA
        MHFLINT +DVSLLV+DG IQN LGSTKEIV LF+ LCKN+M+ERN Y+  CW+MKEYCKHRRHRWMT+LKRDYFGTPWAFISFV A +LLLLTLLQTV 
Subjt:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVA

Query:  SVIALYK
        + IALYK
Subjt:  SVIALYK

XP_008445209.1 PREDICTED: UPF0481 protein At3g47200-like [Cucumis melo]3.7e-4383.18Show/hide
Query:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVA
        MHFLINT KDVSLLV+DG IQNHLGST+EIV LFN LCKN+MVERNLY+ EC KMKEYCKHRRHRWMT+LKRDYFGTPWAFISFV A +LLLLTLLQTV 
Subjt:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVA

Query:  SVIALYK
        + +ALYK
Subjt:  SVIALYK

XP_022131636.1 UPF0481 protein At3g47200-like [Momordica charantia]5.5e-3160.75Show/hide
Query:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVA
        M FL+N+  DV+LL+++G I NHL S KE+  LF  LCKNV+ ERNLYN+EC KM++YCKHRRHRWM +LK DYF TPWA ISF+ A +LLLLTL++ V 
Subjt:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVA

Query:  SVIALYK
        +V+++ K
Subjt:  SVIALYK

XP_022132033.1 UPF0481 protein At3g47200-like [Momordica charantia]4.7e-3061.68Show/hide
Query:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVA
        M FL+N+  DV LL+++G I NHL STK +  LF+ LC+NV+VE NLYN+EC +M+EY KHRRHRWM +LKRDYF TPWA ISF+ A +LLLLTL+QTV 
Subjt:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVA

Query:  SVIALYK
        +V+++ K
Subjt:  SVIALYK

TrEMBL top hitse value%identityAlignment
A0A0A0LPK8 Uncharacterized protein5.7e-4279.44Show/hide
Query:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVA
        MHFLINT +DVSLLV+DG IQN LGSTKEIV LF+ LCKN+M+ERN Y+  CW+MKEYCKHRRHRWMT+LKRDYFGTPWAFISFV A +LLLLTLLQTV 
Subjt:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVA

Query:  SVIALYK
        + IALYK
Subjt:  SVIALYK

A0A1S3BD00 UPF0481 protein At3g47200-like1.8e-4383.18Show/hide
Query:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVA
        MHFLINT KDVSLLV+DG IQNHLGST+EIV LFN LCKN+MVERNLY+ EC KMKEYCKHRRHRWMT+LKRDYFGTPWAFISFV A +LLLLTLLQTV 
Subjt:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVA

Query:  SVIALYK
        + +ALYK
Subjt:  SVIALYK

A0A5A7VCL1 UPF0481 protein5.2e-4382.24Show/hide
Query:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVA
        MHFLINT KDVSLLV+DG IQNHLGST+EIV LFN LCKN++VERNLY+ EC KMKEYCKHRRHRWMT+LKRDYFGTPWAFISFV A +LLLLTLLQTV 
Subjt:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVA

Query:  SVIALYK
        + +ALYK
Subjt:  SVIALYK

A0A6J1BQ21 UPF0481 protein At3g47200-like2.7e-3160.75Show/hide
Query:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVA
        M FL+N+  DV+LL+++G I NHL S KE+  LF  LCKNV+ ERNLYN+EC KM++YCKHRRHRWM +LK DYF TPWA ISF+ A +LLLLTL++ V 
Subjt:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVA

Query:  SVIALYK
        +V+++ K
Subjt:  SVIALYK

A0A6J1BR42 UPF0481 protein At3g47200-like2.3e-3061.68Show/hide
Query:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVA
        M FL+N+  DV LL+++G I NHL STK +  LF+ LC+NV+VE NLYN+EC +M+EY KHRRHRWM +LKRDYF TPWA ISF+ A +LLLLTL+QTV 
Subjt:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVA

Query:  SVIALYK
        +V+++ K
Subjt:  SVIALYK

SwissProt top hitse value%identityAlignment
Q9SD53 UPF0481 protein At3g472009.2e-0528.97Show/hide
Query:  MHFLINTKKDVSLLVEDG-TIQNHLGSTKEIVALFNGLCKNVM--VERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQ
        M  L+N ++DV+ L  D   I+NH GS  E+   F  + K+V+  V+ +  N     + EY K   +      +  +F +PW F+S      ++LLT+LQ
Subjt:  MHFLINTKKDVSLLVEDG-TIQNHLGSTKEIVALFNGLCKNVM--VERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQ

Query:  TVASVIA
        +  ++++
Subjt:  TVASVIA

Arabidopsis top hitse value%identityAlignment
AT3G50120.1 Plant protein of unknown function (DUF247)4.2e-1340.37Show/hide
Query:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVM--VERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQT
        M  LI++ +DVS L   G I++ LGS  E+  LFN LC+ V+   E +  +    ++  Y  H+ + W  TLK  YF  PWA +SF  A ILL+LT  Q+
Subjt:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVM--VERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQT

Query:  VASVIALYK
          +V A YK
Subjt:  VASVIALYK

AT3G50150.1 Plant protein of unknown function (DUF247)1.2e-1240.37Show/hide
Query:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVE-RNLYNFECWK-MKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQT
        M  LIN+ +DVS L  DG I++ LGS  E+  LFN LCK V+ + ++ Y  +  + +  Y   + +    TL++ YF  PWA+ SF  A ILL LT  Q+
Subjt:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVE-RNLYNFECWK-MKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQT

Query:  VASVIALYK
          +V A YK
Subjt:  VASVIALYK

AT3G50160.1 Plant protein of unknown function (DUF247)4.0e-1137.61Show/hide
Query:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERN--LYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQT
        M  LIN+ +DVS L   G I+N LGS  E+  LFNGL K V+ + N    +    ++  Y + + +    TL+  YF  PWA+ SF+ A  LL+ T  Q+
Subjt:  MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERN--LYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQT

Query:  VASVIALYK
          +V A +K
Subjt:  VASVIALYK

AT4G31980.1 unknown protein6.5e-1439.22Show/hide
Query:  INTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLY-NFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVASVI
        I +  D  LL+  G I N+LG++ ++  LFN + K V+ +R  Y +     ++ YC    +RW   L+RDYF  PWA  S   A +LLLLT +Q+V S++
Subjt:  INTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLY-NFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVASVI

Query:  AL
        AL
Subjt:  AL

AT5G11290.1 Plant protein of unknown function (DUF247)4.7e-1234.26Show/hide
Query:  MHFL---INTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQ
        M FL   I +  D  L ++ G I N  G+ +++  LFN + K        Y      ++ +C    ++W  TL+RDYF  PW+  S V A +LLLLT +Q
Subjt:  MHFL---INTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQ

Query:  TVASVIAL
         + S++AL
Subjt:  TVASVIAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTTCTTGATAAACACAAAGAAGGATGTGAGTTTGCTTGTTGAGGATGGGACTATACAAAACCATTTGGGAAGCACCAAGGAAATTGTTGCATTATTCAATGGCCT
TTGTAAGAACGTTATGGTTGAAAGGAATTTGTACAACTTTGAGTGTTGGAAAATGAAAGAATATTGCAAGCACCGTCGACATCGGTGGATGACTACGTTGAAACGAGACT
ATTTTGGGACGCCGTGGGCCTTTATCTCCTTTGTTGTTGCTGCCATCCTCCTTTTACTCACTCTCTTGCAGACAGTGGCATCTGTTATTGCGTTATATAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATTTCTTGATAAACACAAAGAAGGATGTGAGTTTGCTTGTTGAGGATGGGACTATACAAAACCATTTGGGAAGCACCAAGGAAATTGTTGCATTATTCAATGGCCT
TTGTAAGAACGTTATGGTTGAAAGGAATTTGTACAACTTTGAGTGTTGGAAAATGAAAGAATATTGCAAGCACCGTCGACATCGGTGGATGACTACGTTGAAACGAGACT
ATTTTGGGACGCCGTGGGCCTTTATCTCCTTTGTTGTTGCTGCCATCCTCCTTTTACTCACTCTCTTGCAGACAGTGGCATCTGTTATTGCGTTATATAAGTGA
Protein sequenceShow/hide protein sequence
MHFLINTKKDVSLLVEDGTIQNHLGSTKEIVALFNGLCKNVMVERNLYNFECWKMKEYCKHRRHRWMTTLKRDYFGTPWAFISFVVAAILLLLTLLQTVASVIALYK