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HG10004804 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004804
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionB3 domain-containing protein
Genome locationChr08:20560726..20562841
RNA-Seq ExpressionHG10004804
SyntenyHG10004804
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065188.1 putative B3 domain-containing protein [Cucumis melo var. makuwa]1.4e-5065.59Show/hide
Query:  GVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAMANGGFCKRKRTKSSTAKQRKKS--------------RGREMELGKSPPEMPAAMRDRIVGKGGY
        GVHIPRRK+S  VESK ED GASISM+E A I++AMANGGFC+RKR KS T KQ KKS              R + MEL +S PEMPA+MRDRIVG GGY
Subjt:  GVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAMANGGFCKRKRTKSSTAKQRKKS--------------RGREMELGKSPPEMPAAMRDRIVGKGGY

Query:  EIELVIQKQLEESDVSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDK
        EI+LVIQKQLEESDVSRNHGRL LPA KV+ EF+REEER +L+E     +   KKK KKG+EVG+M + LRESS+ LKKWKIGS K
Subjt:  EIELVIQKQLEESDVSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDK

XP_008445569.1 PREDICTED: putative B3 domain-containing protein At3g49610 [Cucumis melo]1.4e-5065.59Show/hide
Query:  GVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAMANGGFCKRKRTKSSTAKQRKKS--------------RGREMELGKSPPEMPAAMRDRIVGKGGY
        GVHIPRRK+S  VESK ED GASISM+E A I++AMANGGFC+RKR KS T KQ KKS              R + MEL +S PEMPA+MRDRIVG GGY
Subjt:  GVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAMANGGFCKRKRTKSSTAKQRKKS--------------RGREMELGKSPPEMPAAMRDRIVGKGGY

Query:  EIELVIQKQLEESDVSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDK
        EI+LVIQKQLEESDVSRNHGRL LPA KV+ EF+REEER +L+E     +   KKK KKG+EVG+M + LRESS+ LKKWKIGS K
Subjt:  EIELVIQKQLEESDVSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDK

XP_016899957.1 PREDICTED: B3 domain-containing protein At1g05920-like [Cucumis melo]2.1e-4159.32Show/hide
Query:  IGLFNGVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAMANGGFCKRKRTKSSTAKQRKKSRGREMELGKSPPEMPAAMRDRIVGKGGYEIELVIQKQ
        I L NG+ IP+RKRS   E K E++  S S++EVA  MI MANG             ++RKK R  EME G+S  EMPAAMR+ IV  GGYEI+LVI+K+
Subjt:  IGLFNGVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAMANGGFCKRKRTKSSTAKQRKKSRGREMELGKSPPEMPAAMRDRIVGKGGYEIELVIQKQ

Query:  LEESDVSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDK
        LEESDVSRNHGRL LP  K++ EF RE+ER++LDE+ G KKKK   KKK G+EVGIMD  LRESS+ LKKWKIGSD+
Subjt:  LEESDVSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDK

XP_031737294.1 putative B3 domain-containing protein At3g49610 [Cucumis sativus]1.7e-5165.59Show/hide
Query:  GVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAMANGGFCKRKRTKSSTAKQRKKS--------------RGREMELGKSPPEMPAAMRDRIVGKGGY
        GVH+PRRKRS  VESK ED GASISM+E A I+IAMAN GFCKRK+ +S T KQ KKS              + + MEL +S PEMPA+MRDR+VGKGGY
Subjt:  GVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAMANGGFCKRKRTKSSTAKQRKKS--------------RGREMELGKSPPEMPAAMRDRIVGKGGY

Query:  EIELVIQKQLEESDVSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDK
        EI+LVIQKQLEESDVSRNHGRL LPAKKV+ EF+REEER +L+E     +   KKK KKG+EVG+MD+ LRESS+ LKKWKIGS K
Subjt:  EIELVIQKQLEESDVSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDK

XP_038884919.1 B3 domain-containing protein At1g05920-like [Benincasa hispida]8.9e-6171.57Show/hide
Query:  IGLFNGVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAM--ANGGFCKRKRTKSSTAKQRK------------------KSRGREMELGKSPPEMPAA
        +G  NGV+IPRRKRS  VESKP+D GASISMMEVA IMIAM  ANGG+ KRKR KSST+KQRK                  KSRG+EMELGKSPPEMPAA
Subjt:  IGLFNGVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAM--ANGGFCKRKRTKSSTAKQRK------------------KSRGREMELGKSPPEMPAA

Query:  MRDRIVGKGGYEIELVIQKQLEESDVSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDK
        MRDRIVG GG EIELVIQK+LEESDV+RN+GRLSLPAKKVRREF+REEE+K+LDE     +K K +KKKKGMEVGI+D+ LRESS+WLKKWKIGS K
Subjt:  MRDRIVGKGGYEIELVIQKQLEESDVSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDK

TrEMBL top hitse value%identityAlignment
A0A0A0LRL4 Uncharacterized protein8.2e-5265.59Show/hide
Query:  GVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAMANGGFCKRKRTKSSTAKQRKKS--------------RGREMELGKSPPEMPAAMRDRIVGKGGY
        GVH+PRRKRS  VESK ED GASISM+E A I+IAMAN GFCKRK+ +S T KQ KKS              + + MEL +S PEMPA+MRDR+VGKGGY
Subjt:  GVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAMANGGFCKRKRTKSSTAKQRKKS--------------RGREMELGKSPPEMPAAMRDRIVGKGGY

Query:  EIELVIQKQLEESDVSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDK
        EI+LVIQKQLEESDVSRNHGRL LPAKKV+ EF+REEER +L+E     +   KKK KKG+EVG+MD+ LRESS+ LKKWKIGS K
Subjt:  EIELVIQKQLEESDVSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDK

A0A1S3BD17 putative B3 domain-containing protein At3g496106.9e-5165.59Show/hide
Query:  GVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAMANGGFCKRKRTKSSTAKQRKKS--------------RGREMELGKSPPEMPAAMRDRIVGKGGY
        GVHIPRRK+S  VESK ED GASISM+E A I++AMANGGFC+RKR KS T KQ KKS              R + MEL +S PEMPA+MRDRIVG GGY
Subjt:  GVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAMANGGFCKRKRTKSSTAKQRKKS--------------RGREMELGKSPPEMPAAMRDRIVGKGGY

Query:  EIELVIQKQLEESDVSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDK
        EI+LVIQKQLEESDVSRNHGRL LPA KV+ EF+REEER +L+E     +   KKK KKG+EVG+M + LRESS+ LKKWKIGS K
Subjt:  EIELVIQKQLEESDVSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDK

A0A1S4DVE5 B3 domain-containing protein At1g05920-like1.0e-4159.32Show/hide
Query:  IGLFNGVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAMANGGFCKRKRTKSSTAKQRKKSRGREMELGKSPPEMPAAMRDRIVGKGGYEIELVIQKQ
        I L NG+ IP+RKRS   E K E++  S S++EVA  MI MANG             ++RKK R  EME G+S  EMPAAMR+ IV  GGYEI+LVI+K+
Subjt:  IGLFNGVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAMANGGFCKRKRTKSSTAKQRKKSRGREMELGKSPPEMPAAMRDRIVGKGGYEIELVIQKQ

Query:  LEESDVSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDK
        LEESDVSRNHGRL LP  K++ EF RE+ER++LDE+ G KKKK   KKK G+EVGIMD  LRESS+ LKKWKIGSD+
Subjt:  LEESDVSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDK

A0A5A7VC33 Putative B3 domain-containing protein6.9e-5165.59Show/hide
Query:  GVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAMANGGFCKRKRTKSSTAKQRKKS--------------RGREMELGKSPPEMPAAMRDRIVGKGGY
        GVHIPRRK+S  VESK ED GASISM+E A I++AMANGGFC+RKR KS T KQ KKS              R + MEL +S PEMPA+MRDRIVG GGY
Subjt:  GVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAMANGGFCKRKRTKSSTAKQRKKS--------------RGREMELGKSPPEMPAAMRDRIVGKGGY

Query:  EIELVIQKQLEESDVSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDK
        EI+LVIQKQLEESDVSRNHGRL LPA KV+ EF+REEER +L+E     +   KKK KKG+EVG+M + LRESS+ LKKWKIGS K
Subjt:  EIELVIQKQLEESDVSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDK

A0A5A7VFT2 B3 domain-containing protein1.0e-4159.32Show/hide
Query:  IGLFNGVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAMANGGFCKRKRTKSSTAKQRKKSRGREMELGKSPPEMPAAMRDRIVGKGGYEIELVIQKQ
        I L NG+ IP+RKRS   E K E++  S S++EVA  MI MANG             ++RKK R  EME G+S  EMPAAMR+ IV  GGYEI+LVI+K+
Subjt:  IGLFNGVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAMANGGFCKRKRTKSSTAKQRKKSRGREMELGKSPPEMPAAMRDRIVGKGGYEIELVIQKQ

Query:  LEESDVSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDK
        LEESDVSRNHGRL LP  K++ EF RE+ER++LDE+ G KKKK   KKK G+EVGIMD  LRESS+ LKKWKIGSD+
Subjt:  LEESDVSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATGGAGATGATTGGGTTATTTAACGGAGTCCACATCCCTCGGAGAAAGAGGTCCTGCTTAGTCGAATCGAAGCCTGAAGATCACGGAGCTTCCATTTCCATGAT
GGAGGTGGCCAATATAATGATCGCCATGGCCAACGGTGGATTCTGCAAAAGGAAGAGGACGAAATCTTCGACGGCAAAACAGAGGAAGAAATCGAGGGGAAGGGAAATGG
AGTTAGGGAAAAGTCCGCCGGAGATGCCGGCGGCGATGAGAGATCGGATTGTGGGGAAGGGCGGGTATGAAATCGAATTGGTGATTCAAAAGCAACTTGAAGAGAGTGAT
GTGAGCAGAAACCATGGGCGATTGAGTCTTCCGGCGAAGAAGGTGAGAAGGGAATTCTTGAGAGAAGAAGAAAGAAAAGTTTTGGATGAAAAAATTGGGAATAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGGGAATGGAAGTGGGAATTATGGATAATCTTCTGAGAGAAAGCTCAATTTGGTTGAAGAAATGGAAGATTGGGAGTGATAAGAGCA
TCAATGGTTCAGAATCCAGATTGGAGGAGAAGACTTGGGTTACGTATATCGTTCGGGGCCAATTCTTGGGATATCGCAAAAACAAAACAGATAAGAAACATAAGGAAACA
ATGGTGAAAACAAAAATTTACCTCAGCTTTTACAGCTGTACAACGCCAAATCACATCAAGAAACTTTCAAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATGGAGATGATTGGGTTATTTAACGGAGTCCACATCCCTCGGAGAAAGAGGTCCTGCTTAGTCGAATCGAAGCCTGAAGATCACGGAGCTTCCATTTCCATGAT
GGAGGTGGCCAATATAATGATCGCCATGGCCAACGGTGGATTCTGCAAAAGGAAGAGGACGAAATCTTCGACGGCAAAACAGAGGAAGAAATCGAGGGGAAGGGAAATGG
AGTTAGGGAAAAGTCCGCCGGAGATGCCGGCGGCGATGAGAGATCGGATTGTGGGGAAGGGCGGGTATGAAATCGAATTGGTGATTCAAAAGCAACTTGAAGAGAGTGAT
GTGAGCAGAAACCATGGGCGATTGAGTCTTCCGGCGAAGAAGGTGAGAAGGGAATTCTTGAGAGAAGAAGAAAGAAAAGTTTTGGATGAAAAAATTGGGAATAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGGGAATGGAAGTGGGAATTATGGATAATCTTCTGAGAGAAAGCTCAATTTGGTTGAAGAAATGGAAGATTGGGAGTGATAAGAGCA
TCAATGGTTCAGAATCCAGATTGGAGGAGAAGACTTGGGTTACGTATATCGTTCGGGGCCAATTCTTGGGATATCGCAAAAACAAAACAGATAAGAAACATAAGGAAACA
ATGGTGAAAACAAAAATTTACCTCAGCTTTTACAGCTGTACAACGCCAAATCACATCAAGAAACTTTCAAATTAA
Protein sequenceShow/hide protein sequence
MGMEMIGLFNGVHIPRRKRSCLVESKPEDHGASISMMEVANIMIAMANGGFCKRKRTKSSTAKQRKKSRGREMELGKSPPEMPAAMRDRIVGKGGYEIELVIQKQLEESD
VSRNHGRLSLPAKKVRREFLREEERKVLDEKIGNKKKKKKKKKKKGMEVGIMDNLLRESSIWLKKWKIGSDKSINGSESRLEEKTWVTYIVRGQFLGYRKNKTDKKHKET
MVKTKIYLSFYSCTTPNHIKKLSN