; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004858 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004858
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionB3 domain-containing protein
Genome locationChr08:20984807..20985358
RNA-Seq ExpressionHG10004858
SyntenyHG10004858
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598443.1 B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3850.53Show/hide
Query:  GGKRRKRKNEAVDDKPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKFEEQ--------KKKANE
        G    KRKN   DD+P+++ +RE+VFS+T+EMP++LR+RI  +GG D+Q+V QK+LQ+ D +++H +  IP +KL ++FAT+ E +        +++   
Subjt:  GGKRRKRKNEAVDDKPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKFEEQ--------KKKANE

Query:  MEVLIIDSCLRESVISLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGI--SHHLCFALVKLDISEGIFKFI
        M+V IIDS LRESVI L+   I     YCL S WNS  ++NSLESGD+IQLWSFR N     N   I   H LCFALVKLDISEGIF FI
Subjt:  MEVLIIDSCLRESVISLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGI--SHHLCFALVKLDISEGIFKFI

XP_008445565.1 PREDICTED: B3 domain-containing protein At3g25182-like [Cucumis melo]6.5e-4051.31Show/hide
Query:  KRRKRKNE-AVDDKPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKFEEQ---------KKKANE
        KR+K  N    D +PKKE ++++VFS TIEM + LRDRI E+ G+DIQ V QKRLQD D++++H +  IP +KL+++FA++ E+Q          K  N 
Subjt:  KRRKRKNE-AVDDKPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKFEEQ---------KKKANE

Query:  MEVLIIDSCLRESVISLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNG---VDSANETGISHHLCFALVKLDISEGIFKFI
        M VLIID  LR   I L+   + +++ YCL S+WNS VQ+NSLESGD+IQLWSFR N    V   ++  ++ +LCFALVKLDISEGIFKFI
Subjt:  MEVLIIDSCLRESVISLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNG---VDSANETGISHHLCFALVKLDISEGIFKFI

XP_022144152.1 B3 domain-containing protein At2g31420-like [Momordica charantia]6.7e-4555.12Show/hide
Query:  VGGKRRKRKNEAVDD----------------KPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKF
        +GG  RKRKN   +D                  KK  Q E+VFS+TIEMP+ LRDRI E+GGYDIQIVIQKRLQD D++ +H + SIPI+KL ++F T+ 
Subjt:  VGGKRRKRKNEAVDD----------------KPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKF

Query:  EEQ--------KKKANEMEVLIIDSCLRESVISLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGISHHLCFALVKLDISEG
        E+Q        +   N +  LI+D CLRES I L+K  I   E YCL S+WNS+ QKNSLESGDFIQLWSFRKN   S   T    HLCFALVKLDISEG
Subjt:  EEQ--------KKKANEMEVLIIDSCLRESVISLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGISHHLCFALVKLDISEG

Query:  IFKFI
        IF+FI
Subjt:  IFKFI

XP_022997537.1 B3 domain-containing protein At1g05920-like [Cucurbita maxima]4.2e-3951.87Show/hide
Query:  KRKNEAVDDKPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKFEEQKKKANE----------MEV
        KRKN   DD+P+++ +RE+VFS+T+EMP++LR RI  +GG D+QIV+QK+LQ+ D +++H +  IP +KL + FAT+ E +     E          MEV
Subjt:  KRKNEAVDDKPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKFEEQKKKANE----------MEV

Query:  LIIDSCLRESVISLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGI--SHHLCFALVKLDISEGIFKFI
         IID+ LRESVI L+   I     YCL S+WNS  ++NSLESGD+IQLWSFR N     N   I   H+LCFALVKLDISEGIF FI
Subjt:  LIIDSCLRESVISLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGI--SHHLCFALVKLDISEGIFKFI

XP_023546349.1 B3 domain-containing protein At1g05920-like [Cucurbita pepo subsp. pepo]2.1e-3850.8Show/hide
Query:  KRKNEAVDDKPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKFE----------EQKKKANEMEV
        KRKN   DD+PK++ +RE+VFS+T+EMP++LR+RI  +GG D+Q+V QK+LQ+ D +++H +  IP +KL ++FAT+ E           ++++   M+V
Subjt:  KRKNEAVDDKPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKFE----------EQKKKANEMEV

Query:  LIIDSCLRESVISLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGI--SHHLCFALVKLDISEGIFKFI
         IIDS LRE+VI L+   I     YCL S WNS  ++NSLESGD+IQLWSFR N     N   I   H LCFALVKLDISEGIF FI
Subjt:  LIIDSCLRESVISLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGI--SHHLCFALVKLDISEGIFKFI

TrEMBL top hitse value%identityAlignment
A0A1S3BCJ5 B3 domain-containing protein At3g25182-like3.2e-4051.31Show/hide
Query:  KRRKRKNE-AVDDKPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKFEEQ---------KKKANE
        KR+K  N    D +PKKE ++++VFS TIEM + LRDRI E+ G+DIQ V QKRLQD D++++H +  IP +KL+++FA++ E+Q          K  N 
Subjt:  KRRKRKNE-AVDDKPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKFEEQ---------KKKANE

Query:  MEVLIIDSCLRESVISLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNG---VDSANETGISHHLCFALVKLDISEGIFKFI
        M VLIID  LR   I L+   + +++ YCL S+WNS VQ+NSLESGD+IQLWSFR N    V   ++  ++ +LCFALVKLDISEGIFKFI
Subjt:  MEVLIIDSCLRESVISLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNG---VDSANETGISHHLCFALVKLDISEGIFKFI

A0A5A7VHB3 B3 domain-containing protein3.2e-4051.31Show/hide
Query:  KRRKRKNE-AVDDKPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKFEEQ---------KKKANE
        KR+K  N    D +PKKE ++++VFS TIEM + LRDRI E+ G+DIQ V QKRLQD D++++H +  IP +KL+++FA++ E+Q          K  N 
Subjt:  KRRKRKNE-AVDDKPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKFEEQ---------KKKANE

Query:  MEVLIIDSCLRESVISLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNG---VDSANETGISHHLCFALVKLDISEGIFKFI
        M VLIID  LR   I L+   + +++ YCL S+WNS VQ+NSLESGD+IQLWSFR N    V   ++  ++ +LCFALVKLDISEGIFKFI
Subjt:  MEVLIIDSCLRESVISLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNG---VDSANETGISHHLCFALVKLDISEGIFKFI

A0A6J1CSV9 B3 domain-containing protein At2g31420-like3.3e-4555.12Show/hide
Query:  VGGKRRKRKNEAVDD----------------KPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKF
        +GG  RKRKN   +D                  KK  Q E+VFS+TIEMP+ LRDRI E+GGYDIQIVIQKRLQD D++ +H + SIPI+KL ++F T+ 
Subjt:  VGGKRRKRKNEAVDD----------------KPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKF

Query:  EEQ--------KKKANEMEVLIIDSCLRESVISLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGISHHLCFALVKLDISEG
        E+Q        +   N +  LI+D CLRES I L+K  I   E YCL S+WNS+ QKNSLESGDFIQLWSFRKN   S   T    HLCFALVKLDISEG
Subjt:  EEQ--------KKKANEMEVLIIDSCLRESVISLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGISHHLCFALVKLDISEG

Query:  IFKFI
        IF+FI
Subjt:  IFKFI

A0A6J1HD06 B3 domain-containing protein At1g05920-like3.0e-3850.27Show/hide
Query:  KRKNEAVDDKPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKFE----------EQKKKANEMEV
        KRKN   DD+P+++ +RE+VFS+T+EMP++LR RI  +GG D+Q+V QK+LQ+ D +++H +  IP +KL ++FAT+ E           ++++   M+V
Subjt:  KRKNEAVDDKPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKFE----------EQKKKANEMEV

Query:  LIIDSCLRESVISLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGI--SHHLCFALVKLDISEGIFKFI
         IID+ LRESVI L+   I     YCL S WNS  ++NSLESGD+IQLWSFR N     N   I   H LCFALVKLDISEGIF FI
Subjt:  LIIDSCLRESVISLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGI--SHHLCFALVKLDISEGIFKFI

A0A6J1K5B4 B3 domain-containing protein At1g05920-like2.0e-3951.87Show/hide
Query:  KRKNEAVDDKPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKFEEQKKKANE----------MEV
        KRKN   DD+P+++ +RE+VFS+T+EMP++LR RI  +GG D+QIV+QK+LQ+ D +++H +  IP +KL + FAT+ E +     E          MEV
Subjt:  KRKNEAVDDKPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKFEEQKKKANE----------MEV

Query:  LIIDSCLRESVISLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGI--SHHLCFALVKLDISEGIFKFI
         IID+ LRESVI L+   I     YCL S+WNS  ++NSLESGD+IQLWSFR N     N   I   H+LCFALVKLDISEGIF FI
Subjt:  LIIDSCLRESVISLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGI--SHHLCFALVKLDISEGIFKFI

SwissProt top hitse value%identityAlignment
Q5RM09 B3 domain-containing protein At1g059207.6e-0729.5Show/hide
Query:  GGYDIQIVIQKRLQDIDVDEDHDQFSIPIEK-LKSNFATKFE----EQKKKANE----MEVLIIDSCLRESVISLRKCMI-----ARYEFYCLTSEWNSV
        G  D +++I+K L   DVD   ++ SIPI   ++++F T  E    ++ +  NE    +   ++D   ++  +  ++  +     + Y  + L  EW++V
Subjt:  GGYDIQIVIQKRLQDIDVDEDHDQFSIPIEK-LKSNFATKFE----EQKKKANE----MEVLIIDSCLRESVISLRKCMI-----ARYEFYCLTSEWNSV

Query:  VQKNSLESGDFIQLWSFRKNGVDSANETGISHHLCFALV
        V+ N L+ GD I LWSFR N +           LCFALV
Subjt:  VQKNSLESGDFIQLWSFRKNGVDSANETGISHHLCFALV

Q9LRX6 Putative B3 domain-containing protein At3g248502.7e-0428.36Show/hide
Query:  DIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSN-FATKFEEQ--KKKANEMEVLIIDSCLRESVISLRKCMIARYEF----------YCLTSEWNSVVQKN
        D +++ +K L   D++   ++ S+P   L  N F T  E +  K+  N  + + + + L +        M+ R+E           Y L   WN VV+ N
Subjt:  DIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSN-FATKFEEQ--KKKANEMEVLIIDSCLRESVISLRKCMIARYEF----------YCLTSEWNSVVQKN

Query:  SLESGDFIQLWSFRKNGVDSANETGISHHLCFAL
         L+ GD I +WSFR  GV           LCFA+
Subjt:  SLESGDFIQLWSFRKNGVDSANETGISHHLCFAL

Q9MA32 B3 domain-containing protein At1g059303.7e-0630.82Show/hide
Query:  TTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDV-DEDHDQFSIPIEKLKSNFATKFEEQ---KKKANEMEVLIIDSCLRESVISLRKCMIARY-EFYCL
        T  EM   LR  + ++   D+ ++++K L   DV    H +FS+   +L SN   K EE+   ++     E + + + L +        ++ R+ + Y L
Subjt:  TTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDV-DEDHDQFSIPIEKLKSNFATKFEEQ---KKKANEMEVLIIDSCLRESVISLRKCMIARY-EFYCL

Query:  TSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGISHHLCFALV
        +  WN VV+ N L++GD I LW+FR +GV           LCFALV
Subjt:  TSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGISHHLCFALV

Arabidopsis top hitse value%identityAlignment
AT1G05920.1 Domain of unknown function (DUF313)5.4e-0829.5Show/hide
Query:  GGYDIQIVIQKRLQDIDVDEDHDQFSIPIEK-LKSNFATKFE----EQKKKANE----MEVLIIDSCLRESVISLRKCMI-----ARYEFYCLTSEWNSV
        G  D +++I+K L   DVD   ++ SIPI   ++++F T  E    ++ +  NE    +   ++D   ++  +  ++  +     + Y  + L  EW++V
Subjt:  GGYDIQIVIQKRLQDIDVDEDHDQFSIPIEK-LKSNFATKFE----EQKKKANE----MEVLIIDSCLRESVISLRKCMI-----ARYEFYCLTSEWNSV

Query:  VQKNSLESGDFIQLWSFRKNGVDSANETGISHHLCFALV
        V+ N L+ GD I LWSFR N +           LCFALV
Subjt:  VQKNSLESGDFIQLWSFRKNGVDSANETGISHHLCFALV

AT1G05930.1 Domain of unknown function (DUF313)2.7e-0730.82Show/hide
Query:  TTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDV-DEDHDQFSIPIEKLKSNFATKFEEQ---KKKANEMEVLIIDSCLRESVISLRKCMIARY-EFYCL
        T  EM   LR  + ++   D+ ++++K L   DV    H +FS+   +L SN   K EE+   ++     E + + + L +        ++ R+ + Y L
Subjt:  TTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDV-DEDHDQFSIPIEKLKSNFATKFEEQ---KKKANEMEVLIIDSCLRESVISLRKCMIARY-EFYCL

Query:  TSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGISHHLCFALV
        +  WN VV+ N L++GD I LW+FR +GV           LCFALV
Subjt:  TSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGISHHLCFALV

AT3G24850.1 Domain of unknown function (DUF313)1.9e-0528.36Show/hide
Query:  DIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSN-FATKFEEQ--KKKANEMEVLIIDSCLRESVISLRKCMIARYEF----------YCLTSEWNSVVQKN
        D +++ +K L   D++   ++ S+P   L  N F T  E +  K+  N  + + + + L +        M+ R+E           Y L   WN VV+ N
Subjt:  DIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSN-FATKFEEQ--KKKANEMEVLIIDSCLRESVISLRKCMIARYEF----------YCLTSEWNSVVQKN

Query:  SLESGDFIQLWSFRKNGVDSANETGISHHLCFAL
         L+ GD I +WSFR  GV           LCFA+
Subjt:  SLESGDFIQLWSFRKNGVDSANETGISHHLCFAL

AT5G24050.1 Domain of unknown function (DUF313)2.1e-0426.87Show/hide
Query:  DIQIVIQKRLQDIDVDEDHDQFSIPIEK-LKSNFATKFE-----EQKKKANEMEV--LIIDSCLRESVISLRKCMIARYE-----FYCLTSEWNSVVQKN
        D +++ +K L   DV+   ++ S+P    L+++F T  E     E     N++ V  +++D   ++  + L++  + +        Y L   WN +V+ N
Subjt:  DIQIVIQKRLQDIDVDEDHDQFSIPIEK-LKSNFATKFE-----EQKKKANEMEV--LIIDSCLRESVISLRKCMIARYE-----FYCLTSEWNSVVQKN

Query:  SLESGDFIQLWSFRKNGVDSANETGISHHLCFAL
         L+ GD I LWSFR  G+           LCFA+
Subjt:  SLESGDFIQLWSFRKNGVDSANETGISHHLCFAL

AT5G38500.1 Domain of unknown function (DUF313)2.1e-0447.92Show/hide
Query:  YCLTSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGISHHLCFAL
        Y L  +WN VV+ NSL++GD I LW+FR  GV           LCFAL
Subjt:  YCLTSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGISHHLCFAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTTGGAGGAAAGAGGCGTAAGAGGAAGAACGAAGCTGTTGATGATAAACCGAAGAAGGAGATTCAAAGGGAAATTGTGTTTTCAACGACGATCGAGATGCCATC
GTCGTTGCGAGACCGAATCATCGAGATAGGTGGCTATGACATTCAAATTGTGATTCAAAAGCGATTGCAAGACATAGATGTAGACGAAGATCATGATCAATTCTCCATTC
CGATCGAAAAGCTCAAAAGCAATTTCGCAACGAAATTCGAAGAACAAAAGAAGAAAGCTAATGAGATGGAAGTGCTTATAATTGATTCTTGTTTGAGAGAAAGTGTGATT
AGCTTGAGAAAGTGCATGATCGCAAGGTATGAATTCTACTGTTTGACATCGGAATGGAATTCTGTTGTGCAAAAGAATTCACTGGAGAGTGGAGACTTCATCCAACTATG
GAGTTTCAGAAAGAACGGAGTTGATTCTGCAAATGAAACAGGAATTTCACACCATCTTTGCTTCGCCCTGGTTAAACTCGACATCTCTGAAGGAATCTTTAAATTTATTT
AA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTTGGAGGAAAGAGGCGTAAGAGGAAGAACGAAGCTGTTGATGATAAACCGAAGAAGGAGATTCAAAGGGAAATTGTGTTTTCAACGACGATCGAGATGCCATC
GTCGTTGCGAGACCGAATCATCGAGATAGGTGGCTATGACATTCAAATTGTGATTCAAAAGCGATTGCAAGACATAGATGTAGACGAAGATCATGATCAATTCTCCATTC
CGATCGAAAAGCTCAAAAGCAATTTCGCAACGAAATTCGAAGAACAAAAGAAGAAAGCTAATGAGATGGAAGTGCTTATAATTGATTCTTGTTTGAGAGAAAGTGTGATT
AGCTTGAGAAAGTGCATGATCGCAAGGTATGAATTCTACTGTTTGACATCGGAATGGAATTCTGTTGTGCAAAAGAATTCACTGGAGAGTGGAGACTTCATCCAACTATG
GAGTTTCAGAAAGAACGGAGTTGATTCTGCAAATGAAACAGGAATTTCACACCATCTTTGCTTCGCCCTGGTTAAACTCGACATCTCTGAAGGAATCTTTAAATTTATTT
AA
Protein sequenceShow/hide protein sequence
MAVGGKRRKRKNEAVDDKPKKEIQREIVFSTTIEMPSSLRDRIIEIGGYDIQIVIQKRLQDIDVDEDHDQFSIPIEKLKSNFATKFEEQKKKANEMEVLIIDSCLRESVI
SLRKCMIARYEFYCLTSEWNSVVQKNSLESGDFIQLWSFRKNGVDSANETGISHHLCFALVKLDISEGIFKFI