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HG10004861 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004861
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionB3 domain-containing protein At2g31420-like
Genome locationChr08:21000707..21001090
RNA-Seq ExpressionHG10004861
SyntenyHG10004861
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005508 - B3 domain-containing protein At2g31720-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598443.1 B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]7.0e-1750Show/hide
Query:  SDSDDVFKTLDLISLFSSNQSINGSSKVQSSENNNTESKETNNKRKNNASDSDRNKPKRERRKEIVFSKTIEMSTELKERIAELGGTDIQIVVQKKLQET
        + S  V KTLDLIS F  N                       NKRKN   D   ++P+R+RR+E+VFS T+EM   L+ERI  +GGTD+Q+V QK+LQE+
Subjt:  SDSDDVFKTLDLISLFSSNQSINGSSKVQSSENNNTESKETNNKRKNNASDSDRNKPKRERRKEIVFSKTIEMSTELKERIAELGGTDIQIVVQKKLQET

Query:  DMNNNHGRLSIPFKKLMNDFVTEE
        D N NHGRL IP KKLMNDF TEE
Subjt:  DMNNNHGRLSIPFKKLMNDFVTEE

XP_004152777.2 putative B3 domain-containing protein At2g27410 [Cucumis sativus]9.5e-2249.31Show/hide
Query:  DVFKTLDLISLFSSNQSINGSSKVQSSENNNTESKETNNKR------------------------KNNASDSDRNKPKRERRKEIVFSKTIEMSTELKER
        DVF+TLDLISLF+S+ + +GSS    +  N+TES+ ++ KR                         NN+  S   +PK+ERRK++VFSKTIEM   L++R
Subjt:  DVFKTLDLISLFSSNQSINGSSKVQSSENNNTESKETNNKR------------------------KNNASDSDRNKPKRERRKEIVFSKTIEMSTELKER

Query:  IAELGGTDIQIVVQKKLQETDMNNNHGRLSIPFKKLMNDFVTEE
        I ELGG +IQ   QK+LQ+TDMN NHGRL IPFKKL+NDF +EE
Subjt:  IAELGGTDIQIVVQKKLQETDMNNNHGRLSIPFKKLMNDFVTEE

XP_008445565.1 PREDICTED: B3 domain-containing protein At3g25182-like [Cucumis melo]1.0e-2049.65Show/hide
Query:  SDDVFKTLDLISLFSSNQSINGS------SKVQSSENNNTES-------------KETNNKRKNNASDSDRNKPKRERRKEIVFSKTIEMSTELKERIAE
        ++ VFKTLDLISLF+ ++S +GS      S++ S ++ N+               K +  ++KN+ S    ++PK+ERRK++VFSKTIEMS  L++RI E
Subjt:  SDDVFKTLDLISLFSSNQSINGS------SKVQSSENNNTES-------------KETNNKRKNNASDSDRNKPKRERRKEIVFSKTIEMSTELKERIAE

Query:  LGGTDIQIVVQKKLQETDMNNNHGRLSIPFKKLMNDFVTEE
        L G DIQ V QK+LQ+TDMN NHGRL IPFKKL NDF +EE
Subjt:  LGGTDIQIVVQKKLQETDMNNNHGRLSIPFKKLMNDFVTEE

XP_022144152.1 B3 domain-containing protein At2g31420-like [Momordica charantia]9.2e-1756.31Show/hide
Query:  INGSSKVQSSENNNTESKETNNKRKNNASDSDRNKPKRERRKEIVFSKTIEMSTELKERIAELGGTDIQIVVQKKLQETDMNNNHGRLSIPFKKLMNDFV
        I G  K ++S +N+TE  +T+N   N+ S  ++N  K+ ++ E+VFS TIEM   L++RIAELGG DIQIV+QK+LQ+TD+N NHGRLSIP KKL+NDF 
Subjt:  INGSSKVQSSENNNTESKETNNKRKNNASDSDRNKPKRERRKEIVFSKTIEMSTELKERIAELGGTDIQIVVQKKLQETDMNNNHGRLSIPFKKLMNDFV

Query:  TEE
        TEE
Subjt:  TEE

XP_023546349.1 B3 domain-containing protein At1g05920-like [Cucurbita pepo subsp. pepo]1.2e-1650Show/hide
Query:  SDSDDVFKTLDLISLFSSNQSINGSSKVQSSENNNTESKETNNKRKNNASDSDRNKPKRERRKEIVFSKTIEMSTELKERIAELGGTDIQIVVQKKLQET
        + S  V KTLDLIS F  +                       NKRKN   D   ++PKR+RR+E+VFS T+EM   L+ERI  +GGTD+Q+V QK+LQE+
Subjt:  SDSDDVFKTLDLISLFSSNQSINGSSKVQSSENNNTESKETNNKRKNNASDSDRNKPKRERRKEIVFSKTIEMSTELKERIAELGGTDIQIVVQKKLQET

Query:  DMNNNHGRLSIPFKKLMNDFVTEE
        D N NHGRL IP KKLMNDF TEE
Subjt:  DMNNNHGRLSIPFKKLMNDFVTEE

TrEMBL top hitse value%identityAlignment
A0A0A0LL20 Uncharacterized protein4.6e-2249.31Show/hide
Query:  DVFKTLDLISLFSSNQSINGSSKVQSSENNNTESKETNNKR------------------------KNNASDSDRNKPKRERRKEIVFSKTIEMSTELKER
        DVF+TLDLISLF+S+ + +GSS    +  N+TES+ ++ KR                         NN+  S   +PK+ERRK++VFSKTIEM   L++R
Subjt:  DVFKTLDLISLFSSNQSINGSSKVQSSENNNTESKETNNKR------------------------KNNASDSDRNKPKRERRKEIVFSKTIEMSTELKER

Query:  IAELGGTDIQIVVQKKLQETDMNNNHGRLSIPFKKLMNDFVTEE
        I ELGG +IQ   QK+LQ+TDMN NHGRL IPFKKL+NDF +EE
Subjt:  IAELGGTDIQIVVQKKLQETDMNNNHGRLSIPFKKLMNDFVTEE

A0A1S3BCJ5 B3 domain-containing protein At3g25182-like5.1e-2149.65Show/hide
Query:  SDDVFKTLDLISLFSSNQSINGS------SKVQSSENNNTES-------------KETNNKRKNNASDSDRNKPKRERRKEIVFSKTIEMSTELKERIAE
        ++ VFKTLDLISLF+ ++S +GS      S++ S ++ N+               K +  ++KN+ S    ++PK+ERRK++VFSKTIEMS  L++RI E
Subjt:  SDDVFKTLDLISLFSSNQSINGS------SKVQSSENNNTES-------------KETNNKRKNNASDSDRNKPKRERRKEIVFSKTIEMSTELKERIAE

Query:  LGGTDIQIVVQKKLQETDMNNNHGRLSIPFKKLMNDFVTEE
        L G DIQ V QK+LQ+TDMN NHGRL IPFKKL NDF +EE
Subjt:  LGGTDIQIVVQKKLQETDMNNNHGRLSIPFKKLMNDFVTEE

A0A5A7VHB3 B3 domain-containing protein5.1e-2149.65Show/hide
Query:  SDDVFKTLDLISLFSSNQSINGS------SKVQSSENNNTES-------------KETNNKRKNNASDSDRNKPKRERRKEIVFSKTIEMSTELKERIAE
        ++ VFKTLDLISLF+ ++S +GS      S++ S ++ N+               K +  ++KN+ S    ++PK+ERRK++VFSKTIEMS  L++RI E
Subjt:  SDDVFKTLDLISLFSSNQSINGS------SKVQSSENNNTES-------------KETNNKRKNNASDSDRNKPKRERRKEIVFSKTIEMSTELKERIAE

Query:  LGGTDIQIVVQKKLQETDMNNNHGRLSIPFKKLMNDFVTEE
        L G DIQ V QK+LQ+TDMN NHGRL IPFKKL NDF +EE
Subjt:  LGGTDIQIVVQKKLQETDMNNNHGRLSIPFKKLMNDFVTEE

A0A6J1CSV9 B3 domain-containing protein At2g31420-like4.4e-1756.31Show/hide
Query:  INGSSKVQSSENNNTESKETNNKRKNNASDSDRNKPKRERRKEIVFSKTIEMSTELKERIAELGGTDIQIVVQKKLQETDMNNNHGRLSIPFKKLMNDFV
        I G  K ++S +N+TE  +T+N   N+ S  ++N  K+ ++ E+VFS TIEM   L++RIAELGG DIQIV+QK+LQ+TD+N NHGRLSIP KKL+NDF 
Subjt:  INGSSKVQSSENNNTESKETNNKRKNNASDSDRNKPKRERRKEIVFSKTIEMSTELKERIAELGGTDIQIVVQKKLQETDMNNNHGRLSIPFKKLMNDFV

Query:  TEE
        TEE
Subjt:  TEE

A0A6J1K5B4 B3 domain-containing protein At1g05920-like1.3e-1660.98Show/hide
Query:  NKRKNNASDSDRNKPKRERRKEIVFSKTIEMSTELKERIAELGGTDIQIVVQKKLQETDMNNNHGRLSIPFKKLMNDFVTEE
        NKRKN   D   ++P+R+RR+E+VFS T+EM   L++RI  +GGTD+QIV+QK+LQE+D N NHGRL IP KKLMN+F TEE
Subjt:  NKRKNNASDSDRNKPKRERRKEIVFSKTIEMSTELKERIAELGGTDIQIVVQKKLQETDMNNNHGRLSIPFKKLMNDFVTEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAGATAGCGATGATGTCTTCAAGACTTTAGATTTAATTTCATTATTCTCTTCTAATCAATCAATCAATGGAAGCTCCAAGGTTCAAAGCTCCGAGAATAATAA
TACGGAATCGAAAGAAACAAACAATAAGAGGAAGAATAATGCTTCTGACTCTGATCGTAATAAGCCAAAGAGGGAGAGGCGAAAAGAAATAGTGTTTTCGAAGACGATCG
AGATGTCGACGGAGTTGAAAGAACGGATCGCTGAACTTGGCGGCACCGACATCCAAATTGTGGTTCAAAAGAAATTACAAGAGACCGATATGAACAACAACCACGGTCGA
TTATCGATTCCGTTCAAAAAGCTCATGAATGATTTCGTTACGGAAGAGTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCAGATAGCGATGATGTCTTCAAGACTTTAGATTTAATTTCATTATTCTCTTCTAATCAATCAATCAATGGAAGCTCCAAGGTTCAAAGCTCCGAGAATAATAA
TACGGAATCGAAAGAAACAAACAATAAGAGGAAGAATAATGCTTCTGACTCTGATCGTAATAAGCCAAAGAGGGAGAGGCGAAAAGAAATAGTGTTTTCGAAGACGATCG
AGATGTCGACGGAGTTGAAAGAACGGATCGCTGAACTTGGCGGCACCGACATCCAAATTGTGGTTCAAAAGAAATTACAAGAGACCGATATGAACAACAACCACGGTCGA
TTATCGATTCCGTTCAAAAAGCTCATGAATGATTTCGTTACGGAAGAGTGTTGA
Protein sequenceShow/hide protein sequence
MDSDSDDVFKTLDLISLFSSNQSINGSSKVQSSENNNTESKETNNKRKNNASDSDRNKPKRERRKEIVFSKTIEMSTELKERIAELGGTDIQIVVQKKLQETDMNNNHGR
LSIPFKKLMNDFVTEEC