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HG10004884 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004884
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncircumsporozoite protein-like
Genome locationChr08:21181484..21181846
RNA-Seq ExpressionHG10004884
SyntenyHG10004884
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144343.1 circumsporozoite protein-like [Momordica charantia]3.8e-0453.85Show/hide
Query:  GGGGEVNRNAEGGGGERNRNADGGGGGGVEDLKNRRAGGGGERKRKAAGGLGGGREVKRKADLAECFSSASGNVRRPW
        GGGGEVNRNAEGGGGE NRN  GGGG    ++  +  GGGGE  RKA GG G         D+ E FSS  G+   PW
Subjt:  GGGGEVNRNAEGGGGERNRNADGGGGGGVEDLKNRRAGGGGERKRKAAGGLGGGREVKRKADLAECFSSASGNVRRPW

XP_022975585.1 circumsporozoite protein-like, partial [Cucurbita maxima]8.4e-0457.89Show/hide
Query:  SLHSTTRDGGGGEVNRNAEGGGGERNRNADGGGGGGVEDLKNRRAGGGGERKRKAAGG-------LGGGREVKRKA
        S HS    GGGGE  RNA GGGGE  RNA GGG     DLK  R GGGGE KR AAGG       +GGG E KR A
Subjt:  SLHSTTRDGGGGEVNRNAEGGGGERNRNADGGGGGGVEDLKNRRAGGGGERKRKAAGG-------LGGGREVKRKA

XP_022975734.1 sperm-activating peptides-like, partial [Cucurbita maxima]8.4e-0457.89Show/hide
Query:  SLHSTTRDGGGGEVNRNAEGGGGERNRNADGGGGGGVEDLKNRRAGGGGERKRKAAGG-------LGGGREVKRKA
        S HS    GGGGE  RNA GGGGE  RNA GGG     DLK  R GGGGE KR AAGG       +GGG E KR A
Subjt:  SLHSTTRDGGGGEVNRNAEGGGGERNRNADGGGGGGVEDLKNRRAGGGGERKRKAAGG-------LGGGREVKRKA

TrEMBL top hitse value%identityAlignment
A0A6J1CT14 circumsporozoite protein-like1.8e-0453.85Show/hide
Query:  GGGGEVNRNAEGGGGERNRNADGGGGGGVEDLKNRRAGGGGERKRKAAGGLGGGREVKRKADLAECFSSASGNVRRPW
        GGGGEVNRNAEGGGGE NRN  GGGG    ++  +  GGGGE  RKA GG G         D+ E FSS  G+   PW
Subjt:  GGGGEVNRNAEGGGGERNRNADGGGGGGVEDLKNRRAGGGGERKRKAAGGLGGGREVKRKADLAECFSSASGNVRRPW

A0A6J1HHF9 circumsporozoite protein-like5.3e-0450.55Show/hide
Query:  SLHSTTRDGGGGEVNRNAEGGGGERNRNADGGGGGGVEDLKNRRAGGGGERKRKAAGG-------LGGGREVKRKADLAECFSSASGNVRR
        S H+    GGGGE  RN  GGGGE  RNA GGG     D K  RAGGGGE KR AAGG        GGG EVKR A      +   G V+R
Subjt:  SLHSTTRDGGGGEVNRNAEGGGGERNRNADGGGGGGVEDLKNRRAGGGGERKRKAAGG-------LGGGREVKRKADLAECFSSASGNVRR

A0A6J1IH45 circumsporozoite protein-like4.1e-0457.89Show/hide
Query:  SLHSTTRDGGGGEVNRNAEGGGGERNRNADGGGGGGVEDLKNRRAGGGGERKRKAAGG-------LGGGREVKRKA
        S HS    GGGGE  RNA GGGGE  RNA GGG     DLK  R GGGGE KR AAGG       +GGG E KR A
Subjt:  SLHSTTRDGGGGEVNRNAEGGGGERNRNADGGGGGGVEDLKNRRAGGGGERKRKAAGG-------LGGGREVKRKA

A0A6J1ILG0 sperm-activating peptides-like4.1e-0457.89Show/hide
Query:  SLHSTTRDGGGGEVNRNAEGGGGERNRNADGGGGGGVEDLKNRRAGGGGERKRKAAGG-------LGGGREVKRKA
        S HS    GGGGE  RNA GGGGE  RNA GGG     DLK  R GGGGE KR AAGG       +GGG E KR A
Subjt:  SLHSTTRDGGGGEVNRNAEGGGGERNRNADGGGGGGVEDLKNRRAGGGGERKRKAAGG-------LGGGREVKRKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTACCTTACGAATGGGCTTTATAGCTTAAAAAAGCCCATCCACTCATTCAGAACATTTTTTTTCTCTTCTCCGCCCTACTTGGTCCTCCGTACAGTCTCGCTTCA
CTCCACCACCCGCGACGGCGGCGGCGGAGAGGTAAACAGAAACGCAGAAGGAGGTGGTGGAGAGAGAAACAGGAACGCAGACGGAGGCGGAGGCGGAGGCGTCGAAGATC
TTAAGAATCGTCGCGCAGGAGGTGGCGGAGAGAGGAAGAGGAAGGCCGCCGGAGGACTGGGAGGCGGCAGAGAGGTGAAGAGGAAGGCAGATTTGGCGGAATGCTTTAGC
TCTGCCTCTGGCAACGTTCGACGGCCATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCTACCTTACGAATGGGCTTTATAGCTTAAAAAAGCCCATCCACTCATTCAGAACATTTTTTTTCTCTTCTCCGCCCTACTTGGTCCTCCGTACAGTCTCGCTTCA
CTCCACCACCCGCGACGGCGGCGGCGGAGAGGTAAACAGAAACGCAGAAGGAGGTGGTGGAGAGAGAAACAGGAACGCAGACGGAGGCGGAGGCGGAGGCGTCGAAGATC
TTAAGAATCGTCGCGCAGGAGGTGGCGGAGAGAGGAAGAGGAAGGCCGCCGGAGGACTGGGAGGCGGCAGAGAGGTGAAGAGGAAGGCAGATTTGGCGGAATGCTTTAGC
TCTGCCTCTGGCAACGTTCGACGGCCATGGTGA
Protein sequenceShow/hide protein sequence
MCYLTNGLYSLKKPIHSFRTFFFSSPPYLVLRTVSLHSTTRDGGGGEVNRNAEGGGGERNRNADGGGGGGVEDLKNRRAGGGGERKRKAAGGLGGGREVKRKADLAECFS
SASGNVRRPW