; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004901 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004901
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr08:21306676..21308698
RNA-Seq ExpressionHG10004901
SyntenyHG10004901
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACN26647.1 unknown [Zea mays]8.9e-0440.49Show/hide
Query:  RCRGMTRPRGRGVTAKSQESGG--------LRTEQRGEGARRRDGVVDVIVEGGGGGEKRNRGGRG-------------SRGGRRNRGGRRGRGRGRGVV
        R RG    +GR   +  +E GG         R ++R   A  +   V V      GGE+R +G RG              R  RR R  RRG GR  G +
Subjt:  RCRGMTRPRGRGVTAKSQESGG--------LRTEQRGEGARRRDGVVDVIVEGGGGGEKRNRGGRG-------------SRGGRRNRGGRRGRGRGRGVV

Query:  ITRAFGVLAGATADRDVAEGAAVSPVAAAGLAEMARLGEVVVIVVTELGVEGIAARAGERVGL
               LA A AD DVAE +   PVAAAG AE+ARLG+VVV+VV ELGV G+AARA + + L
Subjt:  ITRAFGVLAGATADRDVAEGAAVSPVAAAGLAEMARLGEVVVIVVTELGVEGIAARAGERVGL
KAF5468341.1 hypothetical protein F2P56_012499 [Juglans regia]9.2e-0957.94Show/hide
Query:  GRGSRGGRRNRGGRRGRGRGRGVVITRAFG-VLAGATADRDVAEGAAVSPVAAAGLAEMARLGEVVVIVVTELGVEGIAARAGERVGLR--RGREA----
        G    GGRR RGG R    GR     RA G  LAGAT D DVA+GAA+ P+AAAGLAE+A LGEVVV+VV ELG  G AARA ER+ LR  R REA    
Subjt:  GRGSRGGRRNRGGRRGRGRGRGVVITRAFG-VLAGATADRDVAEGAAVSPVAAAGLAEMARLGEVVVIVVTELGVEGIAARAGERVGLR--RGREA----

Query:  HGVLGLG
        HG + +G
Subjt:  HGVLGLG
RZR87348.1 hypothetical protein BHM03_00014726 [Ensete ventricosum]6.8e-0455.71Show/hide
Query:  VLAGATADRDVAEGAAVSPVAAAGLAEMARLGEVVVIVVTELGVEGIAARA-------GERVGLRRGREA
        + A ATAD +VAE AA  PV  AGLAE+ARL + VV+VV ELGV G AARA       G R  +R GR+A
Subjt:  VLAGATADRDVAEGAAVSPVAAAGLAEMARLGEVVVIVVTELGVEGIAARA-------GERVGLRRGREA
TrEMBL top hitse value%identityAlignment
C0HHZ4 Uncharacterized protein4.3e-0440.49Show/hide
Query:  RCRGMTRPRGRGVTAKSQESGG--------LRTEQRGEGARRRDGVVDVIVEGGGGGEKRNRGGRG-------------SRGGRRNRGGRRGRGRGRGVV
        R RG    +GR   +  +E GG         R ++R   A  +   V V      GGE+R +G RG              R  RR R  RRG GR  G +
Subjt:  RCRGMTRPRGRGVTAKSQESGG--------LRTEQRGEGARRRDGVVDVIVEGGGGGEKRNRGGRG-------------SRGGRRNRGGRRGRGRGRGVV

Query:  ITRAFGVLAGATADRDVAEGAAVSPVAAAGLAEMARLGEVVVIVVTELGVEGIAARAGERVGL
               LA A AD DVAE +   PVAAAG AE+ARLG+VVV+VV ELGV G+AARA + + L
Subjt:  ITRAFGVLAGATADRDVAEGAAVSPVAAAGLAEMARLGEVVVIVVTELGVEGIAARAGERVGL
K3YVC5 Uncharacterized protein1.6e-0644Show/hide
Query:  RCRGMTRP-RGRGVTAKSQESGGLRTEQRGEGAR--RRDGVVDVIVEGGGGGEKRNRGGR------------------GSRGGRRNRG------GRRGRG
        RC G  R  R RG   + ++  G+  E R   +   RR+GV  V  E      +R RGGR                  G+RGGRR         GRRG G
Subjt:  RCRGMTRP-RGRGVTAKSQESGGLRTEQRGEGAR--RRDGVVDVIVEGGGGGEKRNRGGR------------------GSRGGRRNRG------GRRGRG

Query:  R--GRGVVITRAFGVLAGATADRDVAEGAAVSPVAAAGLAEMARLGEVVVIVVTELGVEGIAARAGERVGLRRGR
        R  G G    R+ G LA A AD DVAE AA+ PV AA LAE+ARL +VVV+VV ELGV G+A RA +R+G RRGR
Subjt:  R--GRGVVITRAFGVLAGATADRDVAEGAAVSPVAAAGLAEMARLGEVVVIVVTELGVEGIAARAGERVGLRRGR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAAGAAAAAGGCCCACAAGGGCAAATGATGATATGTCTATTATACTCTCTATACCCAACAAACATTTACCCAATAAAAGAAAAACACAGAAATTGAAGAAGAA
GAAGAAGGAAGGAAGATTACTTCAAGCTCTTGCCTTGCATGGAAATGGCAAGGTCCGGCCAACCCAGCAAATCACCGTCGACAACTCCACCGTTACCGCCGCCGTCAGTG
GCATTCATCTGCCACGTGTTGTACCCGGAAGAAGACGTCTCCGGAGCCCCAGCGGCAGCGTAGCTCCCGACGAGATCCCCAACTTCAGGGTAAGTACAAGCATTACCCCA
CAATCCCCTGCCGAGGGCAAACCCCATATCGTCGAACGCTGCAGGGGGATGACCCGACCCAGAGGCAGAGGCGTAACCGCCAAGAGCCAAGAATCCGGAGGCTTGAGAAC
TGAGCAAAGAGGTGAAGGTGCCAGGAGGAGGGATGGTGTCGTTGATGTCATTGTTGAGGGCGGCGGCGGTGGGGAGAAGAGAAACAGAGGAGGAAGAGGAAGCAGAGGTG
GAAGAAGAAACAGAGGTGGAAGAAGAGGCAGAGGCAGAGGAAGGGGTGTTGTGATAACGAGAGCGTTTGGAGTTCTTGCGGGAGCCACCGCCGACAGGGACGTCGCGGAG
GGTGCCGCCGTGAGTCCAGTAGCGGCGGCAGGACTTGCAGAAATGGCGAGGCTGGGAGAGGTTGTAGTTATTGTAGTAACAGAACTTGGTGTTGAGGGAATCGCAGCGAG
GGCAGGGGAGAGGGTCGGATTGAGGAGGGGGAGGGAAGCCCATGGTGTGTTGGGGTTGGGGCCTACTGTTGGTTCTGTTGGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAAGAAAAAGGCCCACAAGGGCAAATGATGATATGTCTATTATACTCTCTATACCCAACAAACATTTACCCAATAAAAGAAAAACACAGAAATTGAAGAAGAA
GAAGAAGGAAGGAAGATTACTTCAAGCTCTTGCCTTGCATGGAAATGGCAAGGTCCGGCCAACCCAGCAAATCACCGTCGACAACTCCACCGTTACCGCCGCCGTCAGTG
GCATTCATCTGCCACGTGTTGTACCCGGAAGAAGACGTCTCCGGAGCCCCAGCGGCAGCGTAGCTCCCGACGAGATCCCCAACTTCAGGGTAAGTACAAGCATTACCCCA
CAATCCCCTGCCGAGGGCAAACCCCATATCGTCGAACGCTGCAGGGGGATGACCCGACCCAGAGGCAGAGGCGTAACCGCCAAGAGCCAAGAATCCGGAGGCTTGAGAAC
TGAGCAAAGAGGTGAAGGTGCCAGGAGGAGGGATGGTGTCGTTGATGTCATTGTTGAGGGCGGCGGCGGTGGGGAGAAGAGAAACAGAGGAGGAAGAGGAAGCAGAGGTG
GAAGAAGAAACAGAGGTGGAAGAAGAGGCAGAGGCAGAGGAAGGGGTGTTGTGATAACGAGAGCGTTTGGAGTTCTTGCGGGAGCCACCGCCGACAGGGACGTCGCGGAG
GGTGCCGCCGTGAGTCCAGTAGCGGCGGCAGGACTTGCAGAAATGGCGAGGCTGGGAGAGGTTGTAGTTATTGTAGTAACAGAACTTGGTGTTGAGGGAATCGCAGCGAG
GGCAGGGGAGAGGGTCGGATTGAGGAGGGGGAGGGAAGCCCATGGTGTGTTGGGGTTGGGGCCTACTGTTGGTTCTGTTGGCTGA
Protein sequenceShow/hide protein sequence
MKKRKRPTRANDDMSIILSIPNKHLPNKRKTQKLKKKKKEGRLLQALALHGNGKVRPTQQITVDNSTVTAAVSGIHLPRVVPGRRRLRSPSGSVAPDEIPNFRVSTSITP
QSPAEGKPHIVERCRGMTRPRGRGVTAKSQESGGLRTEQRGEGARRRDGVVDVIVEGGGGGEKRNRGGRGSRGGRRNRGGRRGRGRGRGVVITRAFGVLAGATADRDVAE
GAAVSPVAAAGLAEMARLGEVVVIVVTELGVEGIAARAGERVGLRRGREAHGVLGLGPTVGSVG