; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004936 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004936
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCalcium-binding EF-hand family protein, putative
Genome locationChr08:21542054..21542320
RNA-Seq ExpressionHG10004936
SyntenyHG10004936
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060893.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]5.4e-3280.22Show/hide
Query:  MTRK-HDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII
        MTR  +DKKK G  L+KEEMK IFREHDFNGDGRLSIKELSR FGS GAFFPLYRA  GLF+AD+DGDGFI+EQELEKV+DYAIKCKYN++
Subjt:  MTRK-HDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII

KAG6585659.1 hypothetical protein SDJN03_18392, partial [Cucurbita argyrosperma subsp. sororia]3.4e-2670Show/hide
Query:  MTRKHDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII
        M  K+ KK     L +EE+KAIF+EHDFNGDGRLSI+ELSR FG LGAF PLYRA  G+ IAD +GDG+ITE EL+KV+DYAIKCKYNII
Subjt:  MTRKHDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII

KGN62515.1 hypothetical protein Csa_022644 [Cucumis sativus]5.9e-3176.92Show/hide
Query:  MTRK-HDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII
        MTR+ +DKKK G  L+KEEMK +FREHDFNGDGRLSIKELSR FG  GAFFPLYRA  GLF+AD+DGDGFI+EQEL+KV+DYAIKCKYN++
Subjt:  MTRK-HDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII

XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]2.3e-2777.65Show/hide
Query:  MTRK-HDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIK
        MTR+ +DKKK G  L+KEEMK +FREHDFNGDGRLSIKELSR FG  GAFFPLYRA  GLF+AD+DGDGFI+EQEL+KV+DYAIK
Subjt:  MTRK-HDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIK

XP_022144349.1 calmodulin-like protein 5 [Momordica charantia]5.2e-2770Show/hide
Query:  MTRKHDKKKPGLE--KEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII
        MT K  KKKP ++  +EE+KAIFR HD NGDG LSIKELSR FGSLGA  PLYRA CG+  AD DGDG IT++ELEKV+DYA+KCKY+II
Subjt:  MTRKHDKKKPGLE--KEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII

TrEMBL top hitse value%identityAlignment
A0A0A0LKW4 Uncharacterized protein2.9e-3176.92Show/hide
Query:  MTRK-HDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII
        MTR+ +DKKK G  L+KEEMK +FREHDFNGDGRLSIKELSR FG  GAFFPLYRA  GLF+AD+DGDGFI+EQEL+KV+DYAIKCKYN++
Subjt:  MTRK-HDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII

A0A0A0LRC1 Uncharacterized protein4.9e-1552.7Show/hide
Query:  LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKY
        L +E++K IFREHD +GDGRLS+ E+ + FG  G+  P Y+A  G+  ADE+GDGFI E+EL+K++DYA K ++
Subjt:  LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKY

A0A5A7UY46 Putative calcium-binding protein CML102.6e-3280.22Show/hide
Query:  MTRK-HDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII
        MTR  +DKKK G  L+KEEMK IFREHDFNGDGRLSIKELSR FGS GAFFPLYRA  GLF+AD+DGDGFI+EQELEKV+DYAIKCKYN++
Subjt:  MTRK-HDKKKPG--LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII

A0A5A7UYC0 Putative calcium-binding protein CML101.1e-1451.35Show/hide
Query:  LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKY
        L +E++K IFREHD +GDGRLS+ E+ + FG  G+  P Y+A  G+  ADE+GDG+I E+EL+K++DYA K ++
Subjt:  LEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKY

A0A6J1CS20 calmodulin-like protein 52.5e-2770Show/hide
Query:  MTRKHDKKKPGLE--KEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII
        MT K  KKKP ++  +EE+KAIFR HD NGDG LSIKELSR FGSLGA  PLYRA CG+  AD DGDG IT++ELEKV+DYA+KCKY+II
Subjt:  MTRKHDKKKPGLE--KEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII

SwissProt top hitse value%identityAlignment
Q6L4D4 Probable calcium-binding protein CML151.3e-0435.71Show/hide
Query:  KKKPGLEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKV
        K +P   ++E + +FR+ D NGDGR+S  EL+ +F S+G           +  AD DGDG+I+  E   +
Subjt:  KKKPGLEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKV

Q8RZB5 Probable calcium-binding protein CML102.0e-0545.76Show/hide
Query:  KEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQE
        +EEM+ +FR+ D NGDGR+S  EL  +F SLG           +  AD DGDGFI+  E
Subjt:  KEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQE

Q9C9U8 Probable calcium-binding protein CML267.6e-0537.7Show/hide
Query:  EMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKV
        E+K +F + D NGDG++S+ EL  VF S+G  +        L   D D DGFI ++E   +
Subjt:  EMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKV

Q9FYK2 Probable calcium-binding protein CML251.3e-0438.33Show/hide
Query:  EKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQE
        E  E++A+F++ D NGDG++S KEL  +  SLG   P       +   D  GDG+I  +E
Subjt:  EKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQE

Q9SRE6 Calcium-binding protein CML388.4e-0430.67Show/hide
Query:  RKHDKKKPGLEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVI
        ++H+      +  E++A+F   D N DGR+S +EL + F +LG       A   + ++D DGDG +  +E  ++I
Subjt:  RKHDKKKPGLEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVI

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein6.0e-0537.93Show/hide
Query:  EEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQE
        EE+K +F + D NGDG++S+ EL  VF ++G  +        L   D D DG+I   E
Subjt:  EEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQE

AT1G18210.2 Calcium-binding EF-hand family protein6.0e-0537.93Show/hide
Query:  EEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQE
        EE+K +F + D NGDG++S+ EL  VF ++G  +        L   D D DG+I   E
Subjt:  EEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQE

AT1G24620.1 EF hand calcium-binding protein family9.2e-0638.33Show/hide
Query:  EKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQE
        E  E++A+F++ D NGDG++S KEL  +  SLG   P       +   D  GDG+I  +E
Subjt:  EKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQE

AT1G73630.1 EF hand calcium-binding protein family5.4e-0637.7Show/hide
Query:  EMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKV
        E+K +F + D NGDG++S+ EL  VF S+G  +        L   D D DGFI ++E   +
Subjt:  EMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKV

AT1G76650.1 calmodulin-like 386.0e-0530.67Show/hide
Query:  RKHDKKKPGLEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVI
        ++H+      +  E++A+F   D N DGR+S +EL + F +LG       A   + ++D DGDG +  +E  ++I
Subjt:  RKHDKKKPGLEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCGTAAACATGACAAGAAGAAACCAGGGTTGGAAAAAGAAGAAATGAAAGCAATTTTTAGGGAGCATGATTTCAATGGCGACGGTCGCTTGAGCATCAAAGAATT
ATCGAGAGTGTTCGGGTCGCTCGGTGCATTCTTCCCTCTCTACCGTGCAACTTGTGGCTTGTTCATTGCCGATGAGGACGGCGATGGATTTATCACTGAGCAAGAACTAG
AGAAAGTGATAGATTATGCTATTAAATGTAAGTATAACATAATATAG
mRNA sequenceShow/hide mRNA sequence
ATGACTCGTAAACATGACAAGAAGAAACCAGGGTTGGAAAAAGAAGAAATGAAAGCAATTTTTAGGGAGCATGATTTCAATGGCGACGGTCGCTTGAGCATCAAAGAATT
ATCGAGAGTGTTCGGGTCGCTCGGTGCATTCTTCCCTCTCTACCGTGCAACTTGTGGCTTGTTCATTGCCGATGAGGACGGCGATGGATTTATCACTGAGCAAGAACTAG
AGAAAGTGATAGATTATGCTATTAAATGTAAGTATAACATAATATAG
Protein sequenceShow/hide protein sequence
MTRKHDKKKPGLEKEEMKAIFREHDFNGDGRLSIKELSRVFGSLGAFFPLYRATCGLFIADEDGDGFITEQELEKVIDYAIKCKYNII