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HG10004937 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004937
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCalcium-binding protein-like
Genome locationChr08:21545817..21546131
RNA-Seq ExpressionHG10004937
SyntenyHG10004937
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060895.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]9.1e-3165.74Show/hide
Query:  MALSRSQLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVID---EHELDKLVDYVMRFQAPKAPKGPK-PPKKH
        MA+SRSQLKL+RDE++EIL++HD+DGDG L K+EV+QAL S+G   + QKAHYGV+ AD+DGDG +D   E EL+KLVDYVMRFQ P+ PK PK P +K 
Subjt:  MALSRSQLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVID---EHELDKLVDYVMRFQAPKAPKGPK-PPKKH

Query:  CDDGKSIV
        C DGKSIV
Subjt:  CDDGKSIV

KGN62514.1 hypothetical protein Csa_021819 [Cucumis sativus]9.1e-3163.64Show/hide
Query:  MALSRSQLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVID--EHELDKLVDYVMRFQAPKAPKGPKPPK----
        MA+SRSQLKL+RDE++EIL++HD+DGDG+L K+EV+QAL S+G+  + QKAHYGV+ AD+DGDG +D  E E++ L+DYVMRFQ P+APK PK PK    
Subjt:  MALSRSQLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVID--EHELDKLVDYVMRFQAPKAPKGPKPPK----

Query:  KHCDDGKSIV
        K C DGKSIV
Subjt:  KHCDDGKSIV

KGN62516.1 hypothetical protein Csa_022521 [Cucumis sativus]2.2e-1654.88Show/hide
Query:  MALSRSQLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEHELDKLVDYVMRFQ
        M+ + ++L+LSR++IKEI ++HDIDGDG L   E+V+A    G+     KAHYG+A ADE+GDG I+E ELDKLVDY  +FQ
Subjt:  MALSRSQLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEHELDKLVDYVMRFQ

KGN62521.1 hypothetical protein Csa_021806 [Cucumis sativus]1.3e-2465.26Show/hide
Query:  MALSRSQLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEH--ELDKLVDYVMRFQAPK-APKGPKP
        MA SRSQLKL+RDE++EIL++HD+DGDG L K+EV+QAL S+G   + QKAHYGVAFAD+DGDG +D    E+D LVDYVMRFQA K  PK   P
Subjt:  MALSRSQLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEH--ELDKLVDYVMRFQAPK-APKGPKP

XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]1.3e-1655.56Show/hide
Query:  ALSRSQLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEHELDKLVDYVMRFQ
        A+  ++L+LSR++IKEI ++HDIDGDG L   E+V+A    G+     KAHYG+A ADE+GDG I+E ELDKLVDY  +FQ
Subjt:  ALSRSQLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEHELDKLVDYVMRFQ

TrEMBL top hitse value%identityAlignment
A0A0A0LNG3 Uncharacterized protein4.4e-3163.64Show/hide
Query:  MALSRSQLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVID--EHELDKLVDYVMRFQAPKAPKGPKPPK----
        MA+SRSQLKL+RDE++EIL++HD+DGDG+L K+EV+QAL S+G+  + QKAHYGV+ AD+DGDG +D  E E++ L+DYVMRFQ P+APK PK PK    
Subjt:  MALSRSQLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVID--EHELDKLVDYVMRFQAPKAPKGPKPPK----

Query:  KHCDDGKSIV
        K C DGKSIV
Subjt:  KHCDDGKSIV

A0A0A0LP50 Uncharacterized protein4.8e-1753.49Show/hide
Query:  MALSRSQLKLSRDE-IKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEHELDKLVDYVMRFQAPK
        M++SRSQL LSRDE IK+I +++D+DGDGTL K+EV+QA+ ++G     Q   +G++FAD D DG +D+ EL+KL+D V+RFQ  K
Subjt:  MALSRSQLKLSRDE-IKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEHELDKLVDYVMRFQAPK

A0A0A0LRC1 Uncharacterized protein1.1e-1654.88Show/hide
Query:  MALSRSQLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEHELDKLVDYVMRFQ
        M+ + ++L+LSR++IKEI ++HDIDGDG L   E+V+A    G+     KAHYG+A ADE+GDG I+E ELDKLVDY  +FQ
Subjt:  MALSRSQLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEHELDKLVDYVMRFQ

A0A0A0LRC3 EF-hand domain-containing protein6.2e-2565.26Show/hide
Query:  MALSRSQLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEH--ELDKLVDYVMRFQAPK-APKGPKP
        MA SRSQLKL+RDE++EIL++HD+DGDG L K+EV+QAL S+G   + QKAHYGVAFAD+DGDG +D    E+D LVDYVMRFQA K  PK   P
Subjt:  MALSRSQLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEH--ELDKLVDYVMRFQAPK-APKGPKP

A0A5A7V4S6 Putative calcium-binding protein CML104.4e-3165.74Show/hide
Query:  MALSRSQLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVID---EHELDKLVDYVMRFQAPKAPKGPK-PPKKH
        MA+SRSQLKL+RDE++EIL++HD+DGDG L K+EV+QAL S+G   + QKAHYGV+ AD+DGDG +D   E EL+KLVDYVMRFQ P+ PK PK P +K 
Subjt:  MALSRSQLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVID---EHELDKLVDYVMRFQAPKAPKGPK-PPKKH

Query:  CDDGKSIV
        C DGKSIV
Subjt:  CDDGKSIV

SwissProt top hitse value%identityAlignment
Q338P8 Probable calcium-binding protein CML84.4e-0436.59Show/hide
Query:  RDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEHEL-----DKLVDYVMRFQAPKAPK
        R EIKE     D DG GT+  KE+  A+++LG     ++ H  +A  D+DG G ID  E      DK+ +   R +  KA K
Subjt:  RDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEHEL-----DKLVDYVMRFQAPKAPK

Q9LNE7 Calmodulin-like protein 77.6e-0433.33Show/hide
Query:  EIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEHELDKLVDYVM
        E+K + Q  D +GDGT+  KE+ + L+SLG +   ++    +   D +GDG +D  E  +L   +M
Subjt:  EIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEHELDKLVDYVM

Arabidopsis top hitse value%identityAlignment
AT1G05990.1 EF hand calcium-binding protein family5.4e-0533.33Show/hide
Query:  EIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEHELDKLVDYVM
        E+K + Q  D +GDGT+  KE+ + L+SLG +   ++    +   D +GDG +D  E  +L   +M
Subjt:  EIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEHELDKLVDYVM

AT1G24620.1 EF hand calcium-binding protein family7.8e-0432.76Show/hide
Query:  DEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEHE
        + +K+    +DIDG+G++  +E+ + L+SLG   +  +    +   D+DGDG ID  E
Subjt:  DEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEHE

AT3G50360.1 centrin22.7e-0437.29Show/hide
Query:  RDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEHE
        + EIKE  +  D DG GT+  KE+  A+++LG     ++ +  +A  D+DG G ID  E
Subjt:  RDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEHE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGTCAAGATCACAACTGAAGTTGTCAAGGGATGAGATTAAGGAGATCTTACAAGACCATGATATTGATGGAGATGGCACCCTCTGCAAGAAAGAGGTGGTGCA
AGCCCTGCAATCTTTAGGCACTTGGACTGCGCATCAGAAAGCTCACTATGGTGTTGCGTTTGCTGACGAAGATGGTGATGGTGTCATCGATGAACATGAGTTGGACAAAC
TCGTCGACTATGTCATGAGGTTTCAGGCCCCAAAGGCCCCCAAGGGCCCCAAGCCCCCAAAAAAGCATTGTGACGATGGCAAATCTATTGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTGTCAAGATCACAACTGAAGTTGTCAAGGGATGAGATTAAGGAGATCTTACAAGACCATGATATTGATGGAGATGGCACCCTCTGCAAGAAAGAGGTGGTGCA
AGCCCTGCAATCTTTAGGCACTTGGACTGCGCATCAGAAAGCTCACTATGGTGTTGCGTTTGCTGACGAAGATGGTGATGGTGTCATCGATGAACATGAGTTGGACAAAC
TCGTCGACTATGTCATGAGGTTTCAGGCCCCAAAGGCCCCCAAGGGCCCCAAGCCCCCAAAAAAGCATTGTGACGATGGCAAATCTATTGTCTAA
Protein sequenceShow/hide protein sequence
MALSRSQLKLSRDEIKEILQDHDIDGDGTLCKKEVVQALQSLGTWTAHQKAHYGVAFADEDGDGVIDEHELDKLVDYVMRFQAPKAPKGPKPPKKHCDDGKSIV