; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004939 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004939
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCalmodulin
Genome locationChr08:21567701..21567979
RNA-Seq ExpressionHG10004939
SyntenyHG10004939
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060899.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]3.1e-3890.22Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKYAKTRKYTIS
        MGNSKSKTYKRVLVPFSEEQLA VFKNHDRDGDG LTKEELKQAF+YLGSR+S+FRV+EALRAADT+GDG ISM EMGKLIKYAKTRKYTIS
Subjt:  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKYAKTRKYTIS

KAG6585662.1 hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3583.52Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKYAKTRKYTI
        MGNSKSKTYKRVLVP +EEQLAG+FK+HDRDGDGKLTKEELKQAF YLGSR+SSFR DEALRAAD DGDG I+MAEM KLI+Y K RKYT+
Subjt:  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKYAKTRKYTI

KAG6598376.1 hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3790.11Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKYAKTRKYTI
        MGNSKSKTYKRVLVPFSEEQLA VFKNHD DGDGKLTKEELKQAF YLGSR+SSFRV+EALRAADTDGDG ISMAEMGKLI+YAK+RKYT+
Subjt:  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKYAKTRKYTI

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3280.22Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKYAKTRKYTI
        MGN+KS  YKRVLVPF+EEQLA +FK+HDRDGDGKL+KEELKQAF YLGSR+SSFRV EALRAADT+GDG ISM EM KLIKY K RKYT+
Subjt:  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKYAKTRKYTI

KAG7029343.1 Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-3687.91Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKYAKTRKYTI
        MGNSKSKTYKRVLVPFSEEQLA VFKNHD DGDGKLTKEELKQAF YLGSR+SSFRV+EALRAAD DGDG ISMAEM KLI+YAK+RKYT+
Subjt:  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKYAKTRKYTI

TrEMBL top hitse value%identityAlignment
A0A0A0LP43 Uncharacterized protein7.9e-1655.42Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKY
        MG S    +K      +E ++A VFKNHD+DGDG+LTKEELK AFKYLG ++++FRV +AL AAD + D  IS  EM KLI Y
Subjt:  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKY

A0A0A0LRB6 Uncharacterized protein7.4e-3889.13Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKYAKTRKYTIS
        MGNSKSKTYKRVLVPFSEEQLA VFKNHDRDGDG LTKEELKQAF+YLGSR+ +FRV+EALRAADT+GDG ISM EMGKLIKYAKTRKYTIS
Subjt:  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKYAKTRKYTIS

A0A2N9FYQ0 Uncharacterized protein2.9e-1851.72Show/hide
Query:  KSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKYAKTRKYTI
        K  ++KR  +PF+EEQL  +FK+HD DGDGKL+++E+K+AFKYLGSR+ ++R ++A+  AD D DG I   E+ KL++YA    YTI
Subjt:  KSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKYAKTRKYTI

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein1.5e-3890.22Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKYAKTRKYTIS
        MGNSKSKTYKRVLVPFSEEQLA VFKNHDRDGDG LTKEELKQAF+YLGSR+S+FRV+EALRAADT+GDG ISM EMGKLIKYAKTRKYTIS
Subjt:  MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKYAKTRKYTIS

A0A7N2KRS3 Uncharacterized protein5.9e-1954.02Show/hide
Query:  KSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKYAKTRKYTI
        K+  +KR  VPF+E+QL  +FK+HD DGDGKL+++ELK AFKYLGSR+ ++R D+ALR AD + DG I+  E+ KL++YA    YT+
Subjt:  KSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKYAKTRKYTI

SwissProt top hitse value%identityAlignment
P05933 Calmodulin1.7e-0743.08Show/hide
Query:  SEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLI
        +EE++   FK  D+DG+G +T EEL      LG R S   V + +R ADTDGDG I+  E  ++I
Subjt:  SEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLI

P24044 Calmodulin1.0e-0741.54Show/hide
Query:  SEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLI
        +EE+L   F+  DRDGDG ++ +EL+     LG + ++  VDE +R AD DGDG I+  E  K++
Subjt:  SEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLI

P27482 Calmodulin-like protein 35.0e-0738.46Show/hide
Query:  SEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLI
        +EE++   F+  D+DG+G ++  EL+     LG + S   VDE +RAADTDGDG ++  E  +++
Subjt:  SEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLI

P62203 Calmodulin1.0e-0741.54Show/hide
Query:  SEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLI
        +EE+L   F+  DRDGDG ++ +EL+     LG + ++  VDE +R AD DGDG I+  E  K++
Subjt:  SEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLI

P84339 Calmodulin5.0e-0740Show/hide
Query:  SEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLI
        SEE++   FK  D+DG+G ++  EL+     LG + +   VDE +R AD DGDG I+  E  K++
Subjt:  SEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLI

Arabidopsis top hitse value%identityAlignment
AT4G03290.1 EF hand calcium-binding protein family2.3e-0738.1Show/hide
Query:  QLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIK
        +L  VF+  D+DGDGK+T +EL ++FK LG       + + ++  D +GDG + + E G+L K
Subjt:  QLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIK

AT4G04695.1 calcium-dependent protein kinase 312.3e-0737.97Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLAG---VFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAE
        M   K    K +    SEE++ G   +F N D D  G +T EELK     LGS  S   V++ + AAD DG+G I + E
Subjt:  MGNSKSKTYKRVLVPFSEEQLAG---VFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAE

AT4G04720.1 calcium-dependent protein kinase 213.0e-0739.24Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLAG---VFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAE
        M   K    K +    SEE++ G   +F N D D  G +T EELK     LGSR S   V + + AAD DG+G I   E
Subjt:  MGNSKSKTYKRVLVPFSEEQLAG---VFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAE

AT5G12180.1 calcium-dependent protein kinase 177.9e-0836.71Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLAG---VFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAE
        M N K    + +    SEE++ G   +FK  D D  G +T EEL+Q     G+R S + V + + AAD DG+G I   E
Subjt:  MGNSKSKTYKRVLVPFSEEQLAG---VFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAE

AT5G19360.1 calcium-dependent protein kinase 347.9e-0836.71Show/hide
Query:  MGNSKSKTYKRVLVPFSEEQLAG---VFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAE
        M N K    + +    SEE++ G   +FK  D D  G +T EEL+Q     G+R S + V + + AAD DG+G I   E
Subjt:  MGNSKSKTYKRVLVPFSEEQLAG---VFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAACTCCAAAAGTAAAACTTACAAACGAGTTCTTGTTCCATTCTCCGAGGAGCAACTGGCCGGCGTTTTCAAGAATCACGATCGAGACGGCGACGGGAAGCTGAC
AAAGGAAGAGTTGAAGCAAGCCTTCAAATATCTTGGCTCACGCTACAGCTCCTTTCGAGTCGATGAAGCCCTACGCGCCGCCGATACCGATGGGGATGGTGCCATCAGCA
TGGCAGAGATGGGCAAGCTAATTAAGTATGCTAAAACTCGTAAATATACTATTAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAACTCCAAAAGTAAAACTTACAAACGAGTTCTTGTTCCATTCTCCGAGGAGCAACTGGCCGGCGTTTTCAAGAATCACGATCGAGACGGCGACGGGAAGCTGAC
AAAGGAAGAGTTGAAGCAAGCCTTCAAATATCTTGGCTCACGCTACAGCTCCTTTCGAGTCGATGAAGCCCTACGCGCCGCCGATACCGATGGGGATGGTGCCATCAGCA
TGGCAGAGATGGGCAAGCTAATTAAGTATGCTAAAACTCGTAAATATACTATTAGTTAA
Protein sequenceShow/hide protein sequence
MGNSKSKTYKRVLVPFSEEQLAGVFKNHDRDGDGKLTKEELKQAFKYLGSRYSSFRVDEALRAADTDGDGAISMAEMGKLIKYAKTRKYTIS