; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10004943 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10004943
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationChr08:21587106..21588509
RNA-Seq ExpressionHG10004943
SyntenyHG10004943
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150882.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucumis sativus]6.2e-13291.04Show/hide
Query:  MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLIARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQA
        MAVS SA    ATA HL P    SSSSYTP  FNP+Q  RLRSP RRTLLIA AQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDP SLKWYVQA
Subjt:  MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLIARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQA

Query:  ELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLN
        ELVH RFAMLGVSG+LLTDLLRVTGISELPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAF+GLEPGYPGGPLLN
Subjt:  ELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLN

Query:  PLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        PLGIAKDIKNAHDWKLKEIKNGRLAMVA+LGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  PLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

XP_008444623.1 PREDICTED: photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucumis melo]3.2e-12887.69Show/hide
Query:  MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLIARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQA
        MAVS+SA    AT FHL PSSSS +  + P+    NQ  RLRSP R +LLIA AQSEHRQTWLPGLDPPP+LDGTL GDFGFDPLGLGEDP SLKWYVQA
Subjt:  MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLIARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQA

Query:  ELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLN
        ELVH RFAMLGV+G+LLTDLLRVTGISELPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLN
Subjt:  ELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLN

Query:  PLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        PLGIAKD+KNAHDWKLKEIKNGRLAMVA+LGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  PLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

XP_022951251.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucurbita moschata]1.8e-12386.09Show/hide
Query:  MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLI-ARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQ
        MAVS+SA    AT+FHL PSSS  SSS +P      + H LRSP RRT+   A++QS+ RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKW+VQ
Subjt:  MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLI-ARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQ

Query:  AELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLL
        AELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+AFEGLEPGYPGGPLL
Subjt:  AELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLL

Query:  NPLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
        NPLG+AKDIKNAHDWKLKEIKNGRLAMVA+LGIFVQAYVT TGPIDNLVEHLSNPWH T+I TLSS
Subjt:  NPLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS

XP_023001834.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Cucurbita maxima]8.2e-12485.87Show/hide
Query:  MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLI-ARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQ
        MAVS+SA    AT FHL PSSS  SSS +      ++ H LRSP RRT+   A++QS+ RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKW+VQ
Subjt:  MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLI-ARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQ

Query:  AELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLL
        AELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+AFEGLEPGYPGGPLL
Subjt:  AELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLL

Query:  NPLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        NPLG+AKDIKNAH+WKLKEIKNGRLAMVA+LGIFVQAYVT TGPIDNLVEHLSNPWH TII TLSSSSP
Subjt:  NPLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

XP_038886221.1 photosystem I chlorophyll a/b-binding protein 5, chloroplastic [Benincasa hispida]7.3e-14196.98Show/hide
Query:  MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLIARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQA
        MAVSVSAATARATAFHLQP  SSSSSSYTP SFNPNQS RLRSP RRTLLIA+AQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQA
Subjt:  MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLIARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQA

Query:  ELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLN
        ELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLN
Subjt:  ELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLN

Query:  PLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
        PLGIAKDIKNAH+WKLKEIKNGRLAMVA+LGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
Subjt:  PLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS

TrEMBL top hitse value%identityAlignment
A0A0A0LRB4 Chlorophyll a-b binding protein, chloroplastic3.0e-13291.04Show/hide
Query:  MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLIARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQA
        MAVS SA    ATA HL P    SSSSYTP  FNP+Q  RLRSP RRTLLIA AQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDP SLKWYVQA
Subjt:  MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLIARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQA

Query:  ELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLN
        ELVH RFAMLGVSG+LLTDLLRVTGISELPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAF+GLEPGYPGGPLLN
Subjt:  ELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLN

Query:  PLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        PLGIAKDIKNAHDWKLKEIKNGRLAMVA+LGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  PLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

A0A1S3BBL1 Chlorophyll a-b binding protein, chloroplastic1.5e-12887.69Show/hide
Query:  MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLIARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQA
        MAVS+SA    AT FHL PSSSS +  + P+    NQ  RLRSP R +LLIA AQSEHRQTWLPGLDPPP+LDGTL GDFGFDPLGLGEDP SLKWYVQA
Subjt:  MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLIARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQA

Query:  ELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLN
        ELVH RFAMLGV+G+LLTDLLRVTGISELPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLN
Subjt:  ELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLN

Query:  PLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        PLGIAKD+KNAHDWKLKEIKNGRLAMVA+LGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  PLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

A0A5A7UY53 Chlorophyll a-b binding protein, chloroplastic1.5e-12887.69Show/hide
Query:  MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLIARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQA
        MAVS+SA    AT FHL PSSSS +  + P+    NQ  RLRSP R +LLIA AQSEHRQTWLPGLDPPP+LDGTL GDFGFDPLGLGEDP SLKWYVQA
Subjt:  MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLIARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQA

Query:  ELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLN
        ELVH RFAMLGV+G+LLTDLLRVTGISELPVWYNAGAVEYGFANK TLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLN
Subjt:  ELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLN

Query:  PLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        PLGIAKD+KNAHDWKLKEIKNGRLAMVA+LGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
Subjt:  PLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

A0A6J1GH16 Chlorophyll a-b binding protein, chloroplastic8.8e-12486.09Show/hide
Query:  MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLI-ARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQ
        MAVS+SA    AT+FHL PSSS  SSS +P      + H LRSP RRT+   A++QS+ RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKW+VQ
Subjt:  MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLI-ARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQ

Query:  AELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLL
        AELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+AFEGLEPGYPGGPLL
Subjt:  AELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLL

Query:  NPLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
        NPLG+AKDIKNAHDWKLKEIKNGRLAMVA+LGIFVQAYVT TGPIDNLVEHLSNPWH T+I TLSS
Subjt:  NPLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS

A0A6J1KNS0 Chlorophyll a-b binding protein, chloroplastic3.9e-12485.87Show/hide
Query:  MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLI-ARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQ
        MAVS+SA    AT FHL PSSS  SSS +      ++ H LRSP RRT+   A++QS+ RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKW+VQ
Subjt:  MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLI-ARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQ

Query:  AELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLL
        AELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLE+AFEGLEPGYPGGPLL
Subjt:  AELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLL

Query:  NPLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP
        NPLG+AKDIKNAH+WKLKEIKNGRLAMVA+LGIFVQAYVT TGPIDNLVEHLSNPWH TII TLSSSSP
Subjt:  NPLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP

SwissProt top hitse value%identityAlignment
P13869 Chlorophyll a-b binding protein, chloroplastic1.5e-4843.59Show/hide
Query:  MAVSVSAATARATAFHLQPSSSSSSS--SYTPSSFNPNQSHRLRSPF------RRTLLIARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPH
        MA + +++T  A AF   PSS  + S    T +SF   +  R+ S F      R   + A A    R  W PG  PP  LDG+L GDFGFDPLGLG DP 
Subjt:  MAVSVSAATARATAFHLQPSSSSSSS--SYTPSSFNPNQSHRLRSPF------RRTLLIARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPH

Query:  SLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPG
        SLKW  QAELVHSR+AMLG +GI + + L   G+   P WY AG  EY F +  TLF+++L+L+G+ E +R+ D   PG    +  F        G + G
Subjt:  SLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPG

Query:  YPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLS
        YPGG   +PLG          + + KEIKNGRLAM+A++G + Q   T TGPIDNL  HL++P H TI    S
Subjt:  YPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLS

P27521 Chlorophyll a-b binding protein 4, chloroplastic2.5e-5144.31Show/hide
Query:  SSSSSSSSYTPSSFNP----NQSHRLRSPFRRTLLIARAQSE------HRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAM
        ++ +S+S + P +  P      S RL      T + + A++        +  WLPGL  P +L G+LAGD GFDPLGL EDP +LKW+VQAELV+ R+AM
Subjt:  SSSSSSSSYTPSSFNP----NQSHRLRSPFRRTLLIARAQSE------HRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAM

Query:  LGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDIK
        LGV+G+LL ++    GI  +P WY+AG  +Y FA+  TLF+++ +L  +VE +R+ D K+PGS  Q+  F   + +    E GYPGG + NPL  A    
Subjt:  LGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDIK

Query:  NAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLS
           + K KE+ NGRLAM+A LG  VQ  VT  GP +NL++HLS+PWH TI+QT +
Subjt:  NAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLS

Q9C639 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic2.0e-10182.38Show/hide
Query:  RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGF
        R TWLPGL+PPP+LDG LAGD+GFDPLGLGEDP SLKWYVQAELVHSRFAMLGV+GIL TDLLR TGI  LPVWY AGAV++ FA+ +TL +VQ LLMGF
Subjt:  RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGF

Query:  VETKRYMDFKSPGSQAQEGT-FFGLEAAFEGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHK
         ETKRYMDF SPGSQA+EG+ FFGLEAA EGLEPGYPGGPLLNPLG+AKD++NAHDWKLKEIKNGRLAM+A+LG FVQA VTHTGPIDNLVEHLSNPWHK
Subjt:  VETKRYMDFKSPGSQAQEGT-FFGLEAAFEGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHK

Query:  TIIQTLSSSS
        TIIQTL +S+
Subjt:  TIIQTLSSSS

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic6.0e-5351.21Show/hide
Query:  WLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVET
        WLPGL  P +L G+L GD GFDPLGL EDP +L+W+VQAELV+ R+AMLGV+G+LL ++    GI  +P WY AG  EY FA+  TLF+++ +L  +VE 
Subjt:  WLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVET

Query:  KRYMDFKSPGSQAQEGTF--FGLEAAFEGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTI
        +R+ D K+PGS  Q+  F  + L A     E GYPGG + NPL  A  +    + K KEI NGRLAM+A LG  +Q  VT  GP DNL++H+S+PWH TI
Subjt:  KRYMDFKSPGSQAQEGTF--FGLEAAFEGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTI

Query:  IQTLSSS
        +QTL  +
Subjt:  IQTLSSS

Q9SYW8 Photosystem I chlorophyll a/b-binding protein 2, chloroplastic4.7e-5049.28Show/hide
Query:  ARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIV
        A A    R  W PG  PP  LDG+L GDFGFDPLGL  DP SLKW VQAE+VH R+AMLG +GI + + L   GI   P WY AG  EY F +K TLF+V
Subjt:  ARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIV

Query:  QLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEH
        +L+L+G+ E +R+ D   PGS   +  F        G + GYPGG   +PLG          + + KEIKNGRLAM+A++G + Q   T TGPIDNL  H
Subjt:  QLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEH

Query:  LSNPWHKTI
        L++P H TI
Subjt:  LSNPWHKTI

Arabidopsis top hitse value%identityAlignment
AT1G19150.1 photosystem I light harvesting complex gene 68.0e-4542.86Show/hide
Query:  RRTLLIARAQSE----------HRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNA
        R  L++ RA  E           R  W PG  PP  LDG+L GDFGFDPLGLG DP +LKW+ QAEL+HSR+AML V+GI++ + L   G  E   WY+A
Subjt:  RRTLLIARAQSE----------HRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNA

Query:  GAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGRLAMVAILGIFV
        G+ EY FA+  TLF+ Q++LMG+ E +R+ D   PGS   E  +          + GYPGG   + +   +   +     + KEIKNGRLAM+A LG   
Subjt:  GAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGRLAMVAILGIFV

Query:  QAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS
        QA  T   PI+NL+ HL++P H  +    +S
Subjt:  QAYVTHTGPIDNLVEHLSNPWHKTIIQTLSS

AT1G45474.1 photosystem I light harvesting complex gene 51.4e-10282.38Show/hide
Query:  RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGF
        R TWLPGL+PPP+LDG LAGD+GFDPLGLGEDP SLKWYVQAELVHSRFAMLGV+GIL TDLLR TGI  LPVWY AGAV++ FA+ +TL +VQ LLMGF
Subjt:  RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGF

Query:  VETKRYMDFKSPGSQAQEGT-FFGLEAAFEGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHK
         ETKRYMDF SPGSQA+EG+ FFGLEAA EGLEPGYPGGPLLNPLG+AKD++NAHDWKLKEIKNGRLAM+A+LG FVQA VTHTGPIDNLVEHLSNPWHK
Subjt:  VETKRYMDFKSPGSQAQEGT-FFGLEAAFEGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHK

Query:  TIIQTLSSSS
        TIIQTL +S+
Subjt:  TIIQTLSSSS

AT1G45474.2 photosystem I light harvesting complex gene 51.4e-10282.38Show/hide
Query:  RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGF
        R TWLPGL+PPP+LDG LAGD+GFDPLGLGEDP SLKWYVQAELVHSRFAMLGV+GIL TDLLR TGI  LPVWY AGAV++ FA+ +TL +VQ LLMGF
Subjt:  RQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGF

Query:  VETKRYMDFKSPGSQAQEGT-FFGLEAAFEGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHK
         ETKRYMDF SPGSQA+EG+ FFGLEAA EGLEPGYPGGPLLNPLG+AKD++NAHDWKLKEIKNGRLAM+A+LG FVQA VTHTGPIDNLVEHLSNPWHK
Subjt:  VETKRYMDFKSPGSQAQEGT-FFGLEAAFEGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHK

Query:  TIIQTLSSSS
        TIIQTL +S+
Subjt:  TIIQTLSSSS

AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A41.8e-5244.31Show/hide
Query:  SSSSSSSSYTPSSFNP----NQSHRLRSPFRRTLLIARAQSE------HRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAM
        ++ +S+S + P +  P      S RL      T + + A++        +  WLPGL  P +L G+LAGD GFDPLGL EDP +LKW+VQAELV+ R+AM
Subjt:  SSSSSSSSYTPSSFNP----NQSHRLRSPFRRTLLIARAQSE------HRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAM

Query:  LGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDIK
        LGV+G+LL ++    GI  +P WY+AG  +Y FA+  TLF+++ +L  +VE +R+ D K+PGS  Q+  F   + +    E GYPGG + NPL  A    
Subjt:  LGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDIK

Query:  NAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLS
           + K KE+ NGRLAM+A LG  VQ  VT  GP +NL++HLS+PWH TI+QT +
Subjt:  NAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLS

AT3G61470.1 photosystem I light harvesting complex gene 23.4e-5149.28Show/hide
Query:  ARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIV
        A A    R  W PG  PP  LDG+L GDFGFDPLGL  DP SLKW VQAE+VH R+AMLG +GI + + L   GI   P WY AG  EY F +K TLF+V
Subjt:  ARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAMLGVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIV

Query:  QLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEH
        +L+L+G+ E +R+ D   PGS   +  F        G + GYPGG   +PLG          + + KEIKNGRLAM+A++G + Q   T TGPIDNL  H
Subjt:  QLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAK-DIKNAHDWKLKEIKNGRLAMVAILGIFVQAYVTHTGPIDNLVEH

Query:  LSNPWHKTI
        L++P H TI
Subjt:  LSNPWHKTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTTCAGTTTCAGCAGCCACTGCCAGAGCCACAGCCTTCCATCTGCAGCCCTCTTCTTCATCTTCATCTTCATCTTACACCCCTTCATCATTCAACCCTAACCA
ATCCCACCGGCTCCGATCACCCTTCCGCCGAACACTATTAATAGCTCGAGCCCAATCGGAGCACCGCCAAACATGGCTCCCCGGCCTCGACCCTCCACCGCATCTCGACG
GAACCCTTGCCGGCGATTTTGGATTCGACCCACTTGGGCTCGGCGAGGACCCACATAGCTTGAAGTGGTACGTTCAAGCAGAGCTTGTTCATTCTCGCTTCGCCATGCTC
GGCGTCTCTGGAATTCTTCTCACAGATTTGCTTCGTGTTACAGGAATCAGTGAATTGCCAGTTTGGTACAATGCGGGCGCTGTTGAATATGGTTTTGCCAACAAAGAAAC
TCTCTTCATTGTTCAGCTGCTGTTGATGGGGTTTGTGGAAACGAAAAGGTATATGGATTTCAAAAGCCCTGGATCTCAAGCACAAGAAGGAACTTTCTTTGGATTAGAAG
CAGCTTTTGAAGGTCTAGAGCCCGGATACCCTGGGGGTCCTCTGCTGAATCCTCTTGGCATTGCTAAAGATATCAAGAATGCCCATGACTGGAAGCTCAAGGAGATTAAG
AATGGACGGCTTGCGATGGTAGCGATACTCGGTATCTTTGTGCAAGCTTATGTTACTCATACGGGGCCAATAGATAACCTTGTGGAGCACCTTTCTAATCCATGGCACAA
GACTATTATCCAGACCCTTTCAAGCTCAAGTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTTCAGTTTCAGCAGCCACTGCCAGAGCCACAGCCTTCCATCTGCAGCCCTCTTCTTCATCTTCATCTTCATCTTACACCCCTTCATCATTCAACCCTAACCA
ATCCCACCGGCTCCGATCACCCTTCCGCCGAACACTATTAATAGCTCGAGCCCAATCGGAGCACCGCCAAACATGGCTCCCCGGCCTCGACCCTCCACCGCATCTCGACG
GAACCCTTGCCGGCGATTTTGGATTCGACCCACTTGGGCTCGGCGAGGACCCACATAGCTTGAAGTGGTACGTTCAAGCAGAGCTTGTTCATTCTCGCTTCGCCATGCTC
GGCGTCTCTGGAATTCTTCTCACAGATTTGCTTCGTGTTACAGGAATCAGTGAATTGCCAGTTTGGTACAATGCGGGCGCTGTTGAATATGGTTTTGCCAACAAAGAAAC
TCTCTTCATTGTTCAGCTGCTGTTGATGGGGTTTGTGGAAACGAAAAGGTATATGGATTTCAAAAGCCCTGGATCTCAAGCACAAGAAGGAACTTTCTTTGGATTAGAAG
CAGCTTTTGAAGGTCTAGAGCCCGGATACCCTGGGGGTCCTCTGCTGAATCCTCTTGGCATTGCTAAAGATATCAAGAATGCCCATGACTGGAAGCTCAAGGAGATTAAG
AATGGACGGCTTGCGATGGTAGCGATACTCGGTATCTTTGTGCAAGCTTATGTTACTCATACGGGGCCAATAGATAACCTTGTGGAGCACCTTTCTAATCCATGGCACAA
GACTATTATCCAGACCCTTTCAAGCTCAAGTCCTTGA
Protein sequenceShow/hide protein sequence
MAVSVSAATARATAFHLQPSSSSSSSSYTPSSFNPNQSHRLRSPFRRTLLIARAQSEHRQTWLPGLDPPPHLDGTLAGDFGFDPLGLGEDPHSLKWYVQAELVHSRFAML
GVSGILLTDLLRVTGISELPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQEGTFFGLEAAFEGLEPGYPGGPLLNPLGIAKDIKNAHDWKLKEIK
NGRLAMVAILGIFVQAYVTHTGPIDNLVEHLSNPWHKTIIQTLSSSSP