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HG10005040 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005040
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiontranscription factor MYBS3-like isoform X1
Genome locationChr08:22463970..22464335
RNA-Seq ExpressionHG10005040
SyntenyHG10005040
Gene Ontology termsGO:0009723 - response to ethylene (biological process)
GO:0009733 - response to auxin (biological process)
GO:0009739 - response to gibberellin (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143039.1 transcription factor MYBS3 [Cucumis sativus]7.9e-2666.14Show/hide
Query:  AAARDKLTVQVVE-GSS-------NFKPTNNLQH----SISNISFGNPTPINNISK-SNLHWFGH-----EDEPYFKFLQSPITKSSSSIMINNFQTTTH
        AAARDKLTVQVVE GSS       N KPTNN  +    S +NISFGNPTPI NIS+ +NL+W  +       EPYFKFLQSPI KSSSSI INNFQTTT+
Subjt:  AAARDKLTVQVVE-GSS-------NFKPTNNLQH----SISNISFGNPTPINNISK-SNLHWFGH-----EDEPYFKFLQSPITKSSSSIMINNFQTTTH

Query:  HHHLHHQQQQPDLQLSLSTPKQV-EQV
        HHH H    QPDLQLSLSTPK V EQV
Subjt:  HHHLHHQQQQPDLQLSLSTPKQV-EQV

XP_008444471.1 PREDICTED: myb-like protein I isoform X1 [Cucumis melo]6.5e-2867.72Show/hide
Query:  AAAARDKLTVQVVE-GSS------NFKPTNNLQH----SISNISFGNPTPINNISK-SNLHWFGH-----EDEPYFKFLQSPITKSSSSIMINNFQTTTH
        +AAARDKLTVQVVE GSS      N KPTNN  +    S +NISFGNPTPI NIS+ SNL+WF +       EPYFKFLQSPI KSS+SIMINNFQTTT+
Subjt:  AAAARDKLTVQVVE-GSS------NFKPTNNLQH----SISNISFGNPTPINNISK-SNLHWFGH-----EDEPYFKFLQSPITKSSSSIMINNFQTTTH

Query:  HHHLHHQQQQPDLQLSLSTPKQV-EQV
        HHH HH    PDLQLSLSTPK V EQV
Subjt:  HHHLHHQQQQPDLQLSLSTPKQV-EQV

XP_023538241.1 probable transcription factor At5g61620 [Cucurbita pepo subsp. pepo]3.4e-1350.78Show/hide
Query:  AARDKLTVQVVEGSSNFKPTNNLQHSISNISFGNPTPINNISKSNL--HWFGHEDEPYFKFLQSPITKSSSSIMINNFQTTTHHHHLHHQQQQPDLQLSL
        A RDK  VQVV+G +N KP +NL  SIS     N TPI+N    +L   WFG+ED   FKFL++PI  SSSS   +  Q T  HH      Q PDLQLSL
Subjt:  AARDKLTVQVVEGSSNFKPTNNLQHSISNISFGNPTPINNISKSNL--HWFGHEDEPYFKFLQSPITKSSSSIMINNFQTTTHHHHLHHQQQQPDLQLSL

Query:  STPKQVEQ----------VVINGAISVT
        STPK VEQ          + INGAISVT
Subjt:  STPKQVEQ----------VVINGAISVT

XP_038884378.1 probable transcription factor At5g61620 isoform X1 [Benincasa hispida]2.2e-2874.34Show/hide
Query:  AAAARDKLTVQVVE-GSSNFKPTNNLQHSISNISFGNPT-PINNISKSNL-HWFGH-EDEPYFKFLQSPITKSSSSIMINNFQTTTHHHHLHHQQQQPDL
        AAAARDKLTVQVVE G SN KP+NN     SNISFGNP  PI NISKSNL +WFGH EDEPYFKF      +SSSSIMINNFQTTTHHHH     Q PDL
Subjt:  AAAARDKLTVQVVE-GSSNFKPTNNLQHSISNISFGNPT-PINNISKSNL-HWFGH-EDEPYFKFLQSPITKSSSSIMINNFQTTTHHHHLHHQQQQPDL

Query:  QLSLSTPKQVEQV
        QLSLSTPK VEQV
Subjt:  QLSLSTPKQVEQV

XP_038884380.1 probable transcription factor At5g61620 isoform X2 [Benincasa hispida]2.2e-2874.34Show/hide
Query:  AAAARDKLTVQVVE-GSSNFKPTNNLQHSISNISFGNPT-PINNISKSNL-HWFGH-EDEPYFKFLQSPITKSSSSIMINNFQTTTHHHHLHHQQQQPDL
        AAAARDKLTVQVVE G SN KP+NN     SNISFGNP  PI NISKSNL +WFGH EDEPYFKF      +SSSSIMINNFQTTTHHHH     Q PDL
Subjt:  AAAARDKLTVQVVE-GSSNFKPTNNLQHSISNISFGNPT-PINNISKSNL-HWFGH-EDEPYFKFLQSPITKSSSSIMINNFQTTTHHHHLHHQQQQPDL

Query:  QLSLSTPKQVEQV
        QLSLSTPK VEQV
Subjt:  QLSLSTPKQVEQV

TrEMBL top hitse value%identityAlignment
A0A0A0LKT1 Uncharacterized protein3.8e-2666.14Show/hide
Query:  AAARDKLTVQVVE-GSS-------NFKPTNNLQH----SISNISFGNPTPINNISK-SNLHWFGH-----EDEPYFKFLQSPITKSSSSIMINNFQTTTH
        AAARDKLTVQVVE GSS       N KPTNN  +    S +NISFGNPTPI NIS+ +NL+W  +       EPYFKFLQSPI KSSSSI INNFQTTT+
Subjt:  AAARDKLTVQVVE-GSS-------NFKPTNNLQH----SISNISFGNPTPINNISK-SNLHWFGH-----EDEPYFKFLQSPITKSSSSIMINNFQTTTH

Query:  HHHLHHQQQQPDLQLSLSTPKQV-EQV
        HHH H    QPDLQLSLSTPK V EQV
Subjt:  HHHLHHQQQQPDLQLSLSTPKQV-EQV

A0A1S3BB61 myb-like protein I isoform X13.1e-2867.72Show/hide
Query:  AAAARDKLTVQVVE-GSS------NFKPTNNLQH----SISNISFGNPTPINNISK-SNLHWFGH-----EDEPYFKFLQSPITKSSSSIMINNFQTTTH
        +AAARDKLTVQVVE GSS      N KPTNN  +    S +NISFGNPTPI NIS+ SNL+WF +       EPYFKFLQSPI KSS+SIMINNFQTTT+
Subjt:  AAAARDKLTVQVVE-GSS------NFKPTNNLQH----SISNISFGNPTPINNISK-SNLHWFGH-----EDEPYFKFLQSPITKSSSSIMINNFQTTTH

Query:  HHHLHHQQQQPDLQLSLSTPKQV-EQV
        HHH HH    PDLQLSLSTPK V EQV
Subjt:  HHHLHHQQQQPDLQLSLSTPKQV-EQV

A0A345BTF5 MYB71.7e-1350.78Show/hide
Query:  AARDKLTVQVVEGSSNFKPTNNLQHSISNISFGNPTPINNISKSNL--HWFGHEDEPYFKFLQSPITKSSSSIMINNFQTTTHHHHLHHQQQQPDLQLSL
        A RDK  VQVV+G +N KP +NL  SIS     N TPI+N    +L   WFG+ED   FKFL++PI  SSSS   +  Q T  HH      Q PDLQLSL
Subjt:  AARDKLTVQVVEGSSNFKPTNNLQHSISNISFGNPTPINNISKSNL--HWFGHEDEPYFKFLQSPITKSSSSIMINNFQTTTHHHHLHHQQQQPDLQLSL

Query:  STPKQVEQ----------VVINGAISVT
        STPK VEQ          + INGAISVT
Subjt:  STPKQVEQ----------VVINGAISVT

A0A455PI93 MYB14.1e-1248.46Show/hide
Query:  AARDKLTVQVVEGSSNFKPTNNLQHSISNISFGNPTPINNISKSNL--HWFGHEDEPYFKFLQSPITKSSSSIMINNFQTTTHHHHLHHQQQQPDLQLSL
        A RDK  VQVV+G +N KP +NL  SIS     N TPI+N    +L   WFG+ED    KF+++PI  SSSS   +  Q T  HH      Q PDLQLSL
Subjt:  AARDKLTVQVVEGSSNFKPTNNLQHSISNISFGNPTPINNISKSNL--HWFGHEDEPYFKFLQSPITKSSSSIMINNFQTTTHHHHLHHQQQQPDLQLSL

Query:  STPKQVEQ------------VVINGAISVT
        STPK VEQ            + INGAISVT
Subjt:  STPKQVEQ------------VVINGAISVT

A0A6J1KLU7 probable transcription factor At5g616202.2e-1046.56Show/hide
Query:  AARDKLTVQVVEGSSNFKPTNNLQHSISNISFGNPTPINNISKSNL--HWFGHEDEPYFKFLQSPITKSSSSIMINNFQTTTHHHHLHHQQQQPDLQLSL
        A  DK  VQVV+  +N KP ++L  SIS     N TPI+N    +L   WFG+ED   FKFL++PI  S+SS   +  Q T  HH      Q PDLQLSL
Subjt:  AARDKLTVQVVEGSSNFKPTNNLQHSISNISFGNPTPINNISKSNL--HWFGHEDEPYFKFLQSPITKSSSSIMINNFQTTTHHHHLHHQQQQPDLQLSL

Query:  STPKQVEQ-------------VVINGAISVT
        STPK VEQ             + INGAISVT
Subjt:  STPKQVEQ-------------VVINGAISVT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACAGGCTGCTGCAGCAAGGGACAAATTGACAGTGCAAGTGGTTGAAGGAAGCAGCAATTTCAAACCAACCAATAATCTGCAACATTCAATATCCAATATTTCCTT
TGGGAATCCAACTCCAATTAATAATATTTCCAAATCAAATCTTCATTGGTTTGGTCATGAAGATGAGCCATATTTCAAGTTTCTTCAAAGCCCCATCACCAAATCTTCAA
GCTCAATTATGATCAACAATTTTCAAACAACAACCCATCATCATCATCTTCATCATCAACAACAACAACCTGATTTGCAGCTAAGTTTGTCCACTCCAAAGCAAGTTGAA
CAAGTAGTCATTAATGGAGCCATTTCAGTGACATAA
mRNA sequenceShow/hide mRNA sequence
ATGACACAGGCTGCTGCAGCAAGGGACAAATTGACAGTGCAAGTGGTTGAAGGAAGCAGCAATTTCAAACCAACCAATAATCTGCAACATTCAATATCCAATATTTCCTT
TGGGAATCCAACTCCAATTAATAATATTTCCAAATCAAATCTTCATTGGTTTGGTCATGAAGATGAGCCATATTTCAAGTTTCTTCAAAGCCCCATCACCAAATCTTCAA
GCTCAATTATGATCAACAATTTTCAAACAACAACCCATCATCATCATCTTCATCATCAACAACAACAACCTGATTTGCAGCTAAGTTTGTCCACTCCAAAGCAAGTTGAA
CAAGTAGTCATTAATGGAGCCATTTCAGTGACATAA
Protein sequenceShow/hide protein sequence
MTQAAAARDKLTVQVVEGSSNFKPTNNLQHSISNISFGNPTPINNISKSNLHWFGHEDEPYFKFLQSPITKSSSSIMINNFQTTTHHHHLHHQQQQPDLQLSLSTPKQVE
QVVINGAISVT