CuGenDBv2

Gene ID	HG10005058
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Rhodanese domain-containing protein
Genome location	Chr08:22595409..22595824
RNA-Seq Expression	HG10005058
Synteny	HG10005058
Gene Ontology terms	GO:0009704 - de-etiolation (biological process) GO:0071277 - cellular response to calcium ion (biological process) GO:0090333 - regulation of stomatal closure (biological process)
InterPro domains	IPR044690 - Calcium sensing receptor, plant

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0061013.1 calcium sensing receptor [Cucumis melo var. makuwa]

9.0e-39

90.82

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Query:  QTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDE-TQNRLPEATIPVSEGIDLSEA
        QTIYRR+ SY+DAEDLNKDVRLL TPVSLGAQALSWAAGKLETNG+GLPTSPSSLDVQNRVLQAAAKHESQPSVDE  QNR PEA IPVSEGIDLSEA
Subjt:  QTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDE-TQNRLPEATIPVSEGIDLSEA

KAG7020149.1 Calcium sensing receptor, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]

4.3e-41

87.5

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Query:  MVWQLHQTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDE-TQNRLPEATIPVSEGID
        MVWQLHQTIYRRV+SY DAEDL KD+RLL TPVSLGAQALSWAAGK+ETNG+GLPTSPSS DVQNRVLQAAAKHESQPSVDE  QNR  EATIPVSEG+D
Subjt:  MVWQLHQTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDE-TQNRLPEATIPVSEGID

Query:  LSEA
        LSEA
Subjt:  LSEA

XP_004142935.1 uncharacterized protein LOC101220363 [Cucumis sativus]

4.5e-38

91.84

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Query:  QTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDE-TQNRLPEATIPVSEGIDLSEA
        QTIYRRVTSY+DAEDLNKDVRLL TPVSLGAQALSWAA KLETNG GLPTSPSSLDVQNRVLQAAAKHESQPSVDE  QNR PEA IPVSEGIDLSEA
Subjt:  QTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDE-TQNRLPEATIPVSEGIDLSEA

XP_008444442.1 PREDICTED: uncharacterized protein LOC103487767 [Cucumis melo]

2.4e-39

91.84

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Query:  QTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDE-TQNRLPEATIPVSEGIDLSEA
        QTIYRR+ SY+DAEDLNKDVRLL TPVSLGAQALSWAAGKLETNG+GLPTSPSSLDVQNRVLQAAAKHESQPSVDE  QNR PEATIPVSEGIDLSEA
Subjt:  QTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDE-TQNRLPEATIPVSEGIDLSEA

XP_022131603.1 uncharacterized protein LOC111004740 [Momordica charantia]

5.3e-39

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Query:  LHQTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDE-TQNRLPEATIPVSEGIDLSEA
        L QTIYRRVTSY+DAEDL KDVRLLFTPVSLGAQALSWAA KLETNG+GLPTSPSSLDVQNRVLQAAAKHESQPSVDE  QNR PEATIPVSE +DLSEA
Subjt:  LHQTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDE-TQNRLPEATIPVSEGIDLSEA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQV3 Rhodanese domain-containing protein

2.2e-38

91.84

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Query:  QTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDE-TQNRLPEATIPVSEGIDLSEA
        QTIYRRVTSY+DAEDLNKDVRLL TPVSLGAQALSWAA KLETNG GLPTSPSSLDVQNRVLQAAAKHESQPSVDE  QNR PEA IPVSEGIDLSEA
Subjt:  QTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDE-TQNRLPEATIPVSEGIDLSEA

A0A1S3BB37 uncharacterized protein LOC103487767

1.2e-39

91.84

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Query:  QTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDE-TQNRLPEATIPVSEGIDLSEA
        QTIYRR+ SY+DAEDLNKDVRLL TPVSLGAQALSWAAGKLETNG+GLPTSPSSLDVQNRVLQAAAKHESQPSVDE  QNR PEATIPVSEGIDLSEA
Subjt:  QTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDE-TQNRLPEATIPVSEGIDLSEA

A0A5A7UYG0 Calcium sensing receptor

4.4e-39

90.82

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Query:  QTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDE-TQNRLPEATIPVSEGIDLSEA
        QTIYRR+ SY+DAEDLNKDVRLL TPVSLGAQALSWAAGKLETNG+GLPTSPSSLDVQNRVLQAAAKHESQPSVDE  QNR PEA IPVSEGIDLSEA
Subjt:  QTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDE-TQNRLPEATIPVSEGIDLSEA

A0A6J1BTU9 uncharacterized protein LOC111004740

2.6e-39

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Query:  LHQTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDE-TQNRLPEATIPVSEGIDLSEA
        L QTIYRRVTSY+DAEDL KDVRLLFTPVSLGAQALSWAA KLETNG+GLPTSPSSLDVQNRVLQAAAKHESQPSVDE  QNR PEATIPVSE +DLSEA
Subjt:  LHQTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDE-TQNRLPEATIPVSEGIDLSEA

A0A6J1KPF8 uncharacterized protein LOC111496420

1.8e-37

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Query:  LHQTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDE-TQNRLPEATIPVSEGIDLSEA
        L QTIYRRV+SY DAEDL KDVRLL TPVSLGAQALSWAAGK+ETNG+GLPTSPSS DVQNRVLQAAAKHESQPSVDE  QNR  EATIPVSEG+DLSEA
Subjt:  LHQTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDE-TQNRLPEATIPVSEGIDLSEA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G59780.1 Rhodanese/Cell cycle control phosphatase superfamily protein

4.5e-28

64.71

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Query:  LHQTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDETQNRLPEATIPVSE---GIDLS
        L  TIY R++SY D+ED  +DVRLL  PV LGAQA SWAAGKLETNG+GLPTSPSS DV++RVLQAAAKHES+PS DET   L +A+    E    +D+S
Subjt:  LHQTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDETQNRLPEATIPVSE---GIDLS

Query:  EA
        EA
Subjt:  EA

Sequences

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CDS sequence

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ATGGTATGGCAACTCCACCAGACAATTTATAGGCGAGTTACATCTTACAAAGATGCTGAAGATTTGAACAAAGATGTCAGGCTGTTATTTACTCCAGTCAGTCTT
GGAGCTCAGGCATTATCATGGGCTGCTGGGAAACTGGAGACGAACGGCATTGGACTACCGACATCTCCTTCCTCCTTGGATGTTCAAAACAGGGTGTTGCAAGCC
GCTGCAAAGCACGAATCTCAGCCTTCGGTTGATGAAACCCAAAACAGACTGCCCGAGGCAACAATTCCAGTCAGTGAGGGTATAGATCTTTCTGAGGCATAG

mRNA sequence

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Protein sequence

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MVWQLHQTIYRRVTSYKDAEDLNKDVRLLFTPVSLGAQALSWAAGKLETNGIGLPTSPSSLDVQNRVLQAAAKHESQPSVDETQNRLPEATIPVSEGIDLSEA

HG10005058 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome