CuGenDBv2

Gene ID	HG10005099
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Coilin
Genome location	Chr08:22865501..22870076
RNA-Seq Expression	HG10005099
Synteny	HG10005099
Gene Ontology terms	GO:0000387 - spliceosomal snRNP assembly (biological process) GO:0015030 - Cajal body (cellular component) GO:0030619 - U1 snRNA binding (molecular function) GO:0030620 - U2 snRNA binding (molecular function)
InterPro domains	IPR024822 - Coilin IPR031722 - Coilin, N-terminal domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0061051.1 coilin-like isoform X1 [Cucumis melo var. makuwa]

9.1e-245

77.85

Show/hide

Query:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQ
        MNSG+VRIRLVFEEG LLSKS RKNGLKRSWILLKSHL +ISDFSSYLLDFFLLR ACP GLILSMDGFVLPPFEPTSILKDKDIVRVKKN D V+A+D+
Subjt:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQ

Query:  MADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTL-AGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEV
        M                  EELV KCTDYKNEA A  EPYDL   LEDTL AGS KK++  KRKALKTLHSSK+KK RV PTSK L+FR EHNGRFQ +V
Subjt:  MADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTL-AGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEV

Query:  FLSEKSLAKKPKLSNGHTDTNDSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEI
        FLSEK L KK K SNGHTD + SNKQKAS   KFSSPEKDKRQMMRKQVKT+K           +KVQQ+RVEKSN KLPDENY EDSEQLAG SDDEEI
Subjt:  FLSEKSLAKKPKLSNGHTDTNDSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEI

Query:  VPVVIRPGHVRFLPLGQEDANQIVHPAQASMDTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDII
        VPVVIRPGHVRFLPLGQ +ANQIVHPAQASMDTI++ G+ VKNVR   +RKSSSWTSN   CEGQSSK QA+KGL+TM  PIDF+KL+PCA+LP+RGDII
Subjt:  VPVVIRPGHVRFLPLGQEDANQIVHPAQASMDTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDII

Query:  AYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMN-EESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTK
        AYRLIELSS+WTPELSSFRVGKV WCKPEANKIM+IPVPEYPFVYK AMN +ES+KHPYAEDGSLK DYSSL+DI+IVEH+NSVGFE AAGNI EASG K
Subjt:  AYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMN-EESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTK

Query:  QSWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSAR---GNGKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHGP
        QSW+KWEN+ST PKQSWNKWGENH   PKQSWKKW++ TS R   GN KENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAH P
Subjt:  QSWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSAR---GNGKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHGP

XP_008444385.1 PREDICTED: coilin-like isoform X1 [Cucumis melo]

6.9e-245

77.85

Show/hide

Query:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQ
        MNSG+VRIRLVFEEG LLSKS RKNGLKRSWILLKSHL +ISDFSSYLLDFFLLR ACP GLILSMDGFVLPPFEPTSILKDKDIVRVKKN D V+A+D+
Subjt:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQ

Query:  MADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTL-AGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEV
        M                  EELV KCTDYKNEA A  EPYDL   LEDTL AGS KK++  KRKALKTLHSSK+KK RV PTSK L+FR EHNGRFQ +V
Subjt:  MADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTL-AGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEV

Query:  FLSEKSLAKKPKLSNGHTDTNDSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEI
        FLSEK L KK K SNGHTD + SNKQ   KLQKFSSPEKDKRQMMRKQVKT+K           +KVQQ+RVEKSN KLPDENY EDSEQLAG SDDEEI
Subjt:  FLSEKSLAKKPKLSNGHTDTNDSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEI

Query:  VPVVIRPGHVRFLPLGQEDANQIVHPAQASMDTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDII
        VPVVIRPGHVRFLPLGQ +ANQIVHPAQASMDTI++ G+ VKNVR   +RKSSSWTSN   CEGQSSK QA+KGL+TM  PIDF+KL+PCA+LP+RGDII
Subjt:  VPVVIRPGHVRFLPLGQEDANQIVHPAQASMDTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDII

Query:  AYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMN-EESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTK
        AYRLIELSS+WTPELSSFRVGKV WCKPEANKIM+IPVPEYPFVYK AMN +ES+KHPYAEDGSLK DYSSL+DI+IVEH+NSVGFE AAGNI EASG K
Subjt:  AYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMN-EESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTK

Query:  QSWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSAR---GNGKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHGP
        QSW+KWEN+ST PKQSWNKWGENH   PKQSWKKW++ TS R   GN KENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAH P
Subjt:  QSWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSAR---GNGKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHGP

XP_008444387.1 PREDICTED: coilin-like isoform X3 [Cucumis melo]

1.7e-246

78.25

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Query:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQ
        MNSG+VRIRLVFEEG LLSKS RKNGLKRSWILLKSHL +ISDFSSYLLDFFLLR ACP GLILSMDGFVLPPFEPTSILKDKDIVRVKKN D V+A+D+
Subjt:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQ

Query:  MADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTL-AGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEV
        M                  EELV KCTDYKNEA A  EPYDL   LEDTL AGS KK++  KRKALKTLHSSK+KK RV PTSK L+FR EHNGRFQ +V
Subjt:  MADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTL-AGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEV

Query:  FLSEKSLAKKPKLSNGHTDTNDSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEI
        FLSEK L KK K SNGHTD + SNKQ   KLQKFSSPEKDKRQMMRKQVKT+K           +KVQQ+RVEKSN KLPDENY EDSEQLAG SDDEEI
Subjt:  FLSEKSLAKKPKLSNGHTDTNDSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEI

Query:  VPVVIRPGHVRFLPLGQEDANQIVHPAQASMDTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDII
        VPVVIRPGHVRFLPLGQ +ANQIVHPAQASMDTI++ G+ VKNVR   +RKSSSWTSN   CEGQSSK QA+KGL+TM  PIDF+KL+PCA+LP+RGDII
Subjt:  VPVVIRPGHVRFLPLGQEDANQIVHPAQASMDTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDII

Query:  AYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMN-EESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTK
        AYRLIELSS+WTPELSSFRVGKV WCKPEANKIM+IPVPEYPFVYK AMN +ES+KHPYAEDGSLK DYSSL+DI+IVEH+NSVGFE AAGNI EASG K
Subjt:  AYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMN-EESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTK

Query:  QSWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSARGNGKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHGP
        QSW+KWEN+ST PKQSWNKWGENH   PKQSWKKW++ TS RGN KENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAH P
Subjt:  QSWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSARGNGKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHGP

XP_038886780.1 coilin-like isoform X1 [Benincasa hispida]

2.5e-258

81.54

Show/hide

Query:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQ
        MNSG++RIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNED VS +DQ
Subjt:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQ

Query:  MADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTLAGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEVF
        MA M+EGQPAD+ VQLLANE+LVK                              KK+VCRKR+ALKTLHSSKIKKN+VAPTSKCLQFRT HNGRFQQEVF
Subjt:  MADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTLAGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEVF

Query:  LSEKSLAKKPKLSNGHTDTNDSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEIV
        LSEKSL KK K S GHTDTNDSNKQKASKLQKFS P KDKRQMMRK VKTQK           EKVQQ+RVEK NGKLPDENYFEDSEQLAG SDDEEIV
Subjt:  LSEKSLAKKPKLSNGHTDTNDSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEIV

Query:  PVVIRPGHVRFLPLGQ--EDANQIVHPAQASMDTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDI
        PVVIRPGHVRFLP GQ   +ANQIVHPAQASMDTIQ+ GIT+KNVRK  KRKSSS  S+ K  EGQSSKLQA+KG AT  CPIDF+KL+PCA+LPKRGDI
Subjt:  PVVIRPGHVRFLPLGQ--EDANQIVHPAQASMDTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDI

Query:  IAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMNEESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTK
        IAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIML+PVPEYPFVYK  M+EESVKHPYAEDGSLKADYSSLVDIRIV+ +NSVGFEAA G ISEAS TK
Subjt:  IAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMNEESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTK

Query:  QSWSKWENNSTAPKQSWNKWGEN--HHGAPKQSWKKWENRTSARGNGKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHG
        QSW+KWENN+TAPKQSWNKW EN  HHGAPKQSWKKWEN +S RGNGKENAWDEILQAFSAKKANLSNEV+WRTGEKKAWEGA G
Subjt:  QSWSKWENNSTAPKQSWNKWGEN--HHGAPKQSWKKWENRTSARGNGKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHG

XP_038886781.1 coilin-like isoform X2 [Benincasa hispida]

1.9e-255

81.03

Show/hide

Query:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQ
        MNSG++RIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNED VS +DQ
Subjt:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQ

Query:  MADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTLAGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEVF
        MA M+EGQPAD+ VQLLANE+LVK                              KK+VCRKR+ALKTLHSSKIKKN+VAPTSKCLQFRT HNGRFQQEVF
Subjt:  MADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTLAGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEVF

Query:  LSEKSLAKKPKLSNGHTDTNDSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEIV
        LSEKSL KK K S GHTDTNDSNKQ   KLQKFS P KDKRQMMRK VKTQK           EKVQQ+RVEK NGKLPDENYFEDSEQLAG SDDEEIV
Subjt:  LSEKSLAKKPKLSNGHTDTNDSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEIV

Query:  PVVIRPGHVRFLPLGQ--EDANQIVHPAQASMDTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDI
        PVVIRPGHVRFLP GQ   +ANQIVHPAQASMDTIQ+ GIT+KNVRK  KRKSSS  S+ K  EGQSSKLQA+KG AT  CPIDF+KL+PCA+LPKRGDI
Subjt:  PVVIRPGHVRFLPLGQ--EDANQIVHPAQASMDTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDI

Query:  IAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMNEESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTK
        IAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIML+PVPEYPFVYK  M+EESVKHPYAEDGSLKADYSSLVDIRIV+ +NSVGFEAA G ISEAS TK
Subjt:  IAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMNEESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTK

Query:  QSWSKWENNSTAPKQSWNKWGEN--HHGAPKQSWKKWENRTSARGNGKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHG
        QSW+KWENN+TAPKQSWNKW EN  HHGAPKQSWKKWEN +S RGNGKENAWDEILQAFSAKKANLSNEV+WRTGEKKAWEGA G
Subjt:  QSWSKWENNSTAPKQSWNKWGEN--HHGAPKQSWKKWENRTSARGNGKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQQ3 Coilin

9.5e-240

76.28

Show/hide

Query:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQ
        MNSG+VRIRL+FE+G LLSKS RKNGLKRSWILLKSHL +ISDFSSYLLD+F LR ACP GLILSMDGFVLPPFEPTSILKDKDIVRVKKN D V+A D+
Subjt:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQ

Query:  MADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTL-AGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEV
        M                  EELV KCTDYKNEA A  EPY+L   LEDTL AGS KK++  KRKALKTLHSSK+KK RV PTSK L+FRTEHNGRFQ +V
Subjt:  MADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTL-AGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEV

Query:  FLSEKSLAKKPKLSNGHTDTNDSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEI
         LSEKSL +K K S+GHTDT+ SN+Q   KLQKFSSP+KDKR+MMRKQVKT+K           +KVQQ+RVEKSN KLPDENY EDSEQLAG SDD+EI
Subjt:  FLSEKSLAKKPKLSNGHTDTNDSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEI

Query:  VPVVIRPGHVRFLPLGQEDANQIVHPAQASMDTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDII
        VPVVIRPGHVRFLPLGQ +ANQIVHP QASMD I++ G+ VKNVR   +RKSSSWTSN K CEGQSSK QAKKGL+TM  PIDF KL+PCA+LP+RGDII
Subjt:  VPVVIRPGHVRFLPLGQEDANQIVHPAQASMDTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDII

Query:  AYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMNEESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTKQ
        AYRLIELSS+WTPELSSFRVGKV WCKPEANKIM+IPVPEYPFVYK AMN+ES+KHPYAEDGSLK DYSSL+DI+IVEH+NSVGFEA AGNI EASGTKQ
Subjt:  AYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMNEESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTKQ

Query:  SWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSAR---GNGKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHGP
        SW+KWEN+STAPKQSWNK GENH   PKQSWKKWE+RTS R   GNGKEN WDEILQAF AKKA L NEVRWRTGE KAWEGAH P
Subjt:  SWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSAR---GNGKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHGP

A0A1S3BA97 Coilin

3.4e-245

77.85

Show/hide

Query:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQ
        MNSG+VRIRLVFEEG LLSKS RKNGLKRSWILLKSHL +ISDFSSYLLDFFLLR ACP GLILSMDGFVLPPFEPTSILKDKDIVRVKKN D V+A+D+
Subjt:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQ

Query:  MADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTL-AGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEV
        M                  EELV KCTDYKNEA A  EPYDL   LEDTL AGS KK++  KRKALKTLHSSK+KK RV PTSK L+FR EHNGRFQ +V
Subjt:  MADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTL-AGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEV

Query:  FLSEKSLAKKPKLSNGHTDTNDSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEI
        FLSEK L KK K SNGHTD + SNKQ   KLQKFSSPEKDKRQMMRKQVKT+K           +KVQQ+RVEKSN KLPDENY EDSEQLAG SDDEEI
Subjt:  FLSEKSLAKKPKLSNGHTDTNDSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEI

Query:  VPVVIRPGHVRFLPLGQEDANQIVHPAQASMDTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDII
        VPVVIRPGHVRFLPLGQ +ANQIVHPAQASMDTI++ G+ VKNVR   +RKSSSWTSN   CEGQSSK QA+KGL+TM  PIDF+KL+PCA+LP+RGDII
Subjt:  VPVVIRPGHVRFLPLGQEDANQIVHPAQASMDTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDII

Query:  AYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMN-EESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTK
        AYRLIELSS+WTPELSSFRVGKV WCKPEANKIM+IPVPEYPFVYK AMN +ES+KHPYAEDGSLK DYSSL+DI+IVEH+NSVGFE AAGNI EASG K
Subjt:  AYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMN-EESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTK

Query:  QSWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSAR---GNGKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHGP
        QSW+KWEN+ST PKQSWNKWGENH   PKQSWKKW++ TS R   GN KENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAH P
Subjt:  QSWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSAR---GNGKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHGP

A0A1S3BAZ0 Coilin

2.8e-244

78.02

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Query:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQ
        MNSG+VRIRLVFEEG LLSKS RKNGLKRSWILLKSHL +ISDFSSYLLDFFLLR ACP GLILSMDGFVLPPFEPTSILKDKDIVRVKKN D V+A+D+
Subjt:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQ

Query:  MADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTL-AGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEV
        M                  EELV KCTDYKNEA A  EPYDL   LEDTL AGS KK++  KRKALKTLHSSK+KK RV PTSK L+FR EHNGRFQ +V
Subjt:  MADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTL-AGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEV

Query:  FLSEKSLAKKPKLSNGHTDTNDSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEI
        FLSEK L KK K SNGHTD + SNKQ   KLQKFSSPEKDKRQMMRKQVKT+K           +KVQQ+RVEKSN KLPDENY EDSEQLAG SDDEEI
Subjt:  FLSEKSLAKKPKLSNGHTDTNDSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEI

Query:  VPVVIRPGHVRFLPLGQEDANQIVHPAQASMDTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDII
        VPVVIRPGHVRFLPLGQE ANQIVHPAQASMDTI++ G+ VKNVR   +RKSSSWTSN   CEGQSSK QA+KGL+TM  PIDF+KL+PCA+LP+RGDII
Subjt:  VPVVIRPGHVRFLPLGQEDANQIVHPAQASMDTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDII

Query:  AYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMN-EESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTK
        AYRLIELSS+WTPELSSFRVGKV WCKPEANKIM+IPVPEYPFVYK AMN +ES+KHPYAEDGSLK DYSSL+DI+IVEH+NSVGFE AAGNI EASG K
Subjt:  AYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMN-EESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTK

Query:  QSWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSAR---GNGKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHGP
        QSW+KWEN+ST PKQSWNKWGENH   PKQSWKKW++ TS R   GN KENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAH P
Subjt:  QSWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSAR---GNGKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHGP

A0A1S3BB08 Coilin

8.0e-247

78.25

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Query:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQ
        MNSG+VRIRLVFEEG LLSKS RKNGLKRSWILLKSHL +ISDFSSYLLDFFLLR ACP GLILSMDGFVLPPFEPTSILKDKDIVRVKKN D V+A+D+
Subjt:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQ

Query:  MADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTL-AGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEV
        M                  EELV KCTDYKNEA A  EPYDL   LEDTL AGS KK++  KRKALKTLHSSK+KK RV PTSK L+FR EHNGRFQ +V
Subjt:  MADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTL-AGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEV

Query:  FLSEKSLAKKPKLSNGHTDTNDSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEI
        FLSEK L KK K SNGHTD + SNKQ   KLQKFSSPEKDKRQMMRKQVKT+K           +KVQQ+RVEKSN KLPDENY EDSEQLAG SDDEEI
Subjt:  FLSEKSLAKKPKLSNGHTDTNDSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEI

Query:  VPVVIRPGHVRFLPLGQEDANQIVHPAQASMDTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDII
        VPVVIRPGHVRFLPLGQ +ANQIVHPAQASMDTI++ G+ VKNVR   +RKSSSWTSN   CEGQSSK QA+KGL+TM  PIDF+KL+PCA+LP+RGDII
Subjt:  VPVVIRPGHVRFLPLGQEDANQIVHPAQASMDTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDII

Query:  AYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMN-EESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTK
        AYRLIELSS+WTPELSSFRVGKV WCKPEANKIM+IPVPEYPFVYK AMN +ES+KHPYAEDGSLK DYSSL+DI+IVEH+NSVGFE AAGNI EASG K
Subjt:  AYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMN-EESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTK

Query:  QSWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSARGNGKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHGP
        QSW+KWEN+ST PKQSWNKWGENH   PKQSWKKW++ TS RGN KENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAH P
Subjt:  QSWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSARGNGKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHGP

A0A5A7V5I3 Coilin

4.4e-245

77.85

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Query:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQ
        MNSG+VRIRLVFEEG LLSKS RKNGLKRSWILLKSHL +ISDFSSYLLDFFLLR ACP GLILSMDGFVLPPFEPTSILKDKDIVRVKKN D V+A+D+
Subjt:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQ

Query:  MADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTL-AGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEV
        M                  EELV KCTDYKNEA A  EPYDL   LEDTL AGS KK++  KRKALKTLHSSK+KK RV PTSK L+FR EHNGRFQ +V
Subjt:  MADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTL-AGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEV

Query:  FLSEKSLAKKPKLSNGHTDTNDSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEI
        FLSEK L KK K SNGHTD + SNKQKAS   KFSSPEKDKRQMMRKQVKT+K           +KVQQ+RVEKSN KLPDENY EDSEQLAG SDDEEI
Subjt:  FLSEKSLAKKPKLSNGHTDTNDSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEI

Query:  VPVVIRPGHVRFLPLGQEDANQIVHPAQASMDTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDII
        VPVVIRPGHVRFLPLGQ +ANQIVHPAQASMDTI++ G+ VKNVR   +RKSSSWTSN   CEGQSSK QA+KGL+TM  PIDF+KL+PCA+LP+RGDII
Subjt:  VPVVIRPGHVRFLPLGQEDANQIVHPAQASMDTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDII

Query:  AYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMN-EESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTK
        AYRLIELSS+WTPELSSFRVGKV WCKPEANKIM+IPVPEYPFVYK AMN +ES+KHPYAEDGSLK DYSSL+DI+IVEH+NSVGFE AAGNI EASG K
Subjt:  AYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMN-EESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTK

Query:  QSWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSAR---GNGKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHGP
        QSW+KWEN+ST PKQSWNKWGENH   PKQSWKKW++ TS R   GN KENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAH P
Subjt:  QSWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSAR---GNGKENAWDEILQAFSAKKANLSNEVRWRTGEKKAWEGAHGP

SwissProt top hits

e value

%identity

Alignment

P38432 Coilin

4.5e-05

25.96

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Query:  DFSKLRPCANLPKRGDIIAYRLIELSSSWTPELSSFRVGKVSWCKPEANKI---MLIPVP------EYPFVYKTAMNEESVKHPYAEDGSLKADYSSLVD
        D+S L   A  P+ G+ IA++L+EL+SS++P++S ++ G++    PE  ++   +L  +P      ++  VY      E V++   ++  +   +  L+D
Subjt:  DFSKLRPCANLPKRGDIIAYRLIELSSSWTPELSSFRVGKVSWCKPEANKI---MLIPVP------EYPFVYKTAMNEESVKHPYAEDGSLKADYSSLVD

Query:  IRIV
         R++
Subjt:  IRIV

Q09003 Coilin

2.0e-05

24.07

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Query:  DFSKLRPCANLPKRGDIIAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPE--------YPFVYKTAMNEESVKHPYAEDGSLKADYSSLVDI
        D+S L   A  P+ G +IA++L+E+S ++TPE+S ++ GK+    P   +I +  + +        +  VY++   E+ V++   ++  +  ++++L++ 
Subjt:  DFSKLRPCANLPKRGDIIAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPE--------YPFVYKTAMNEESVKHPYAEDGSLKADYSSLVDI

Query:  RIVEHENS
        R++  + S
Subjt:  RIVEHENS

Q5SU73 Coilin

2.9e-04

25.96

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Query:  DFSKLRPCANLPKRGDIIAYRLIELSSSWTPELSSFRVGKVSWCKPEANKI---MLIPVP------EYPFVYKTAMNEESVKHPYAEDGSLKADYSSLVD
        D+S L   A  P+ G+ IA++L+EL+S ++P++S ++ GK+    PE  ++   +L  +P      ++  VY      E V++   ++  +   +  L+D
Subjt:  DFSKLRPCANLPKRGDIIAYRLIELSSSWTPELSSFRVGKVSWCKPEANKI---MLIPVP------EYPFVYKTAMNEESVKHPYAEDGSLKADYSSLVD

Query:  IRIV
         R++
Subjt:  IRIV

Q8RWK8 Coilin

9.6e-64

33.44

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Query:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILL--KSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKK--------
        M    VR+RLVFE+  +LSK Q+K GL RSW++L  K H R+IS+FS ++   F L  ACP GL LSM+GFVLPPFE + +LKDKDIV VKK        
Subjt:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILL--KSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKK--------

Query:  -----NEDIVSAIDQMADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTLAGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCL
             +E++ +AI ++ +  + +P ++   LLANEE  K+   Y++E+  D    +L    E+ +    +K   +KRK      S+K KK ++  T +  
Subjt:  -----NEDIVSAIDQMADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTLAGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCL

Query:  QFRTEHNGRFQQEVFLSEKSLAKKPKLSNGHTDTNDS----NKQKASKLQKFSSPEKD---------------------KRQMMRKQVKTQKEKVL-VLW
          R E+       V   +K  +   + +N     NDS     K K S  Q+ S    D                     KRQ +R++ K +KE++L    
Subjt:  QFRTEHNGRFQQEVFLSEKSLAKKPKLSNGHTDTNDS----NKQKASKLQKFSSPEKD---------------------KRQMMRKQVKTQKEKVL-VLW

Query:  IPAPEKVQQRRVEKSNGKLPDENYFE--DSEQLAGRSD--DEEIVPVVIRPGHVRFLPLGQEDANQIVHPAQASMDTIQVKG-ITVKNVRKWDKRKSSSW
        + AP    Q+ V   + +   E + E  +++Q    SD   +E+VPV +RPGH+RF PL   D   +   ++  ++ +   G +T K  +KW   K S +
Subjt:  IPAPEKVQQRRVEKSNGKLPDENYFE--DSEQLAGRSD--DEEIVPVVIRPGHVRFLPLGQEDANQIVHPAQASMDTIQVKG-ITVKNVRKWDKRKSSSW

Query:  TSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDIIAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMNEESVK
        +    +   + +  Q  +      CPID+ +L       K+GD+IAYRLIEL+SSWTPE+SSFRVGK+S+  P++  + L+PV E+P   KT  +++   
Subjt:  TSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDIIAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMNEESVK

Query:  HP----YAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTKQSWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSARGNGKENAWDE
         P    Y EDGSL+ ++S+L+D+R V+  +S   E A   + E           + ++  PK S NK                E +T A+ NG+ + W+E
Subjt:  HP----YAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTKQSWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSARGNGKENAWDE

Query:  ILQAFSAKKANLS
        + +A SAKKA LS
Subjt:  ILQAFSAKKANLS

Arabidopsis top hits

e value

%identity

Alignment

AT1G13030.1 sphere organelles protein-related

6.8e-65

33.44

Show/hide

Query:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILL--KSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKK--------
        M    VR+RLVFE+  +LSK Q+K GL RSW++L  K H R+IS+FS ++   F L  ACP GL LSM+GFVLPPFE + +LKDKDIV VKK        
Subjt:  MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILL--KSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKK--------

Query:  -----NEDIVSAIDQMADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTLAGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCL
             +E++ +AI ++ +  + +P ++   LLANEE  K+   Y++E+  D    +L    E+ +    +K   +KRK      S+K KK ++  T +  
Subjt:  -----NEDIVSAIDQMADMVEGQPADIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTLAGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCL

Query:  QFRTEHNGRFQQEVFLSEKSLAKKPKLSNGHTDTNDS----NKQKASKLQKFSSPEKD---------------------KRQMMRKQVKTQKEKVL-VLW
          R E+       V   +K  +   + +N     NDS     K K S  Q+ S    D                     KRQ +R++ K +KE++L    
Subjt:  QFRTEHNGRFQQEVFLSEKSLAKKPKLSNGHTDTNDS----NKQKASKLQKFSSPEKD---------------------KRQMMRKQVKTQKEKVL-VLW

Query:  IPAPEKVQQRRVEKSNGKLPDENYFE--DSEQLAGRSD--DEEIVPVVIRPGHVRFLPLGQEDANQIVHPAQASMDTIQVKG-ITVKNVRKWDKRKSSSW
        + AP    Q+ V   + +   E + E  +++Q    SD   +E+VPV +RPGH+RF PL   D   +   ++  ++ +   G +T K  +KW   K S +
Subjt:  IPAPEKVQQRRVEKSNGKLPDENYFE--DSEQLAGRSD--DEEIVPVVIRPGHVRFLPLGQEDANQIVHPAQASMDTIQVKG-ITVKNVRKWDKRKSSSW

Query:  TSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDIIAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMNEESVK
        +    +   + +  Q  +      CPID+ +L       K+GD+IAYRLIEL+SSWTPE+SSFRVGK+S+  P++  + L+PV E+P   KT  +++   
Subjt:  TSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDIIAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEYPFVYKTAMNEESVK

Query:  HP----YAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTKQSWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSARGNGKENAWDE
         P    Y EDGSL+ ++S+L+D+R V+  +S   E A   + E           + ++  PK S NK                E +T A+ NG+ + W+E
Subjt:  HP----YAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTKQSWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSARGNGKENAWDE

Query:  ILQAFSAKKANLS
        + +A SAKKA LS
Subjt:  ILQAFSAKKANLS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAACTCGGGGAGTGTGAGAATACGTTTGGTTTTCGAAGAGGGGCACCTACTGAGCAAGTCGCAGAGGAAAAATGGACTGAAACGGAGTTGGATTCTTCTGAAATCTCA
CCTCCGTTCCATTTCCGACTTCTCTTCCTATCTCCTCGACTTTTTCTTGCTTCGCGGTGCTTGTCCTGATGGCCTCATTCTTTCTATGGATGGTTTTGTTCTACCACCTT
TTGAGCCTACTTCTATTTTGAAGGATAAAGATATTGTTAGGGTGAAGAAGAATGAGGACATCGTGTCTGCGATTGACCAAATGGCAGACATGGTGGAGGGGCAACCTGCT
GATATAGATGTTCAGCTTCTAGCCAACGAAGAGCTTGTGAAGAAGTGCACTGACTACAAAAATGAAGCAGCTGCAGATGTTGAACCTTATGATCTGCCGCTTCACTTGGA
AGACACATTGGCGGGAAGCAATAAGAAATCAGTTTGTAGGAAGAGGAAGGCACTGAAAACACTTCACAGCTCAAAGATAAAGAAAAACAGAGTTGCTCCAACTTCCAAAT
GTTTACAGTTTCGTACAGAGCATAATGGTAGATTCCAGCAGGAAGTTTTTCTTTCTGAAAAGAGTCTGGCAAAGAAGCCGAAATTATCCAACGGTCACACTGATACAAAT
GACTCCAACAAGCAAAAGGCTAGTAAACTTCAAAAGTTTTCTTCACCGGAGAAGGATAAAAGGCAAATGATGAGGAAACAAGTCAAAACTCAGAAGGAAAAGGTACTCGT
GCTCTGGATTCCTGCTCCTGAGAAGGTACAGCAACGAAGAGTTGAAAAGAGTAACGGTAAGTTACCTGATGAGAATTACTTTGAGGACTCTGAACAGCTAGCTGGCAGAA
GTGATGATGAAGAAATTGTACCCGTGGTAATTAGACCAGGACATGTTCGTTTTCTGCCTCTTGGTCAAGAAGACGCAAACCAGATTGTCCATCCAGCTCAAGCTTCAATG
GACACCATACAGGTGAAGGGGATAACAGTTAAGAATGTACGAAAATGGGATAAAAGGAAATCATCATCTTGGACAAGTAATAGCAAGAAGTGTGAAGGACAAAGTTCTAA
GCTGCAAGCTAAAAAAGGTTTAGCAACTATGAAGTGCCCAATTGACTTCAGTAAACTCAGACCATGTGCTAACTTGCCCAAGAGAGGTGATATAATTGCATATCGTTTAA
TAGAATTATCATCATCGTGGACTCCAGAACTTTCCTCCTTCAGAGTTGGAAAAGTATCATGGTGTAAACCTGAAGCAAATAAGATTATGCTGATTCCTGTTCCAGAATAT
CCATTTGTTTATAAGACGGCAATGAATGAGGAATCAGTTAAACATCCATATGCGGAAGATGGCTCTTTAAAGGCAGATTACTCCTCACTCGTTGACATCAGAATTGTTGA
GCATGAAAACTCAGTAGGTTTTGAAGCAGCTGCTGGTAATATCAGTGAAGCATCTGGTACAAAACAAAGCTGGAGCAAGTGGGAGAACAATTCCACTGCACCGAAACAAA
GCTGGAACAAATGGGGGGAGAACCACCACGGGGCACCAAAACAAAGCTGGAAAAAGTGGGAAAACCGTACTAGTGCACGGGGAAACGGAAAGGAAAATGCATGGGATGAA
ATTCTCCAGGCTTTCAGCGCGAAGAAAGCTAATTTGTCCAATGAAGTTCGATGGAGAACAGGGGAGAAGAAAGCTTGGGAAGGAGCTCATGGTCCATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MNSGSVRIRLVFEEGHLLSKSQRKNGLKRSWILLKSHLRSISDFSSYLLDFFLLRGACPDGLILSMDGFVLPPFEPTSILKDKDIVRVKKNEDIVSAIDQMADMVEGQPA
DIDVQLLANEELVKKCTDYKNEAAADVEPYDLPLHLEDTLAGSNKKSVCRKRKALKTLHSSKIKKNRVAPTSKCLQFRTEHNGRFQQEVFLSEKSLAKKPKLSNGHTDTN
DSNKQKASKLQKFSSPEKDKRQMMRKQVKTQKEKVLVLWIPAPEKVQQRRVEKSNGKLPDENYFEDSEQLAGRSDDEEIVPVVIRPGHVRFLPLGQEDANQIVHPAQASM
DTIQVKGITVKNVRKWDKRKSSSWTSNSKKCEGQSSKLQAKKGLATMKCPIDFSKLRPCANLPKRGDIIAYRLIELSSSWTPELSSFRVGKVSWCKPEANKIMLIPVPEY
PFVYKTAMNEESVKHPYAEDGSLKADYSSLVDIRIVEHENSVGFEAAAGNISEASGTKQSWSKWENNSTAPKQSWNKWGENHHGAPKQSWKKWENRTSARGNGKENAWDE
ILQAFSAKKANLSNEVRWRTGEKKAWEGAHGP

HG10005099 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome