; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10005138 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005138
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiontype 2 DNA topoisomerase 6 subunit B-like isoform X4
Genome locationChr08:23121812..23126935
RNA-Seq ExpressionHG10005138
SyntenyHG10005138
Gene Ontology termsGO:0042138 - meiotic DNA double-strand break formation (biological process)
GO:0016853 - isomerase activity (molecular function)
InterPro domainsIPR034566 - Type 2 DNA topoisomerase 6 subunit B-like, plants


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029197.1 Type 2 DNA topoisomerase 6 subunit B-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]7.8e-16372.08Show/hide
Query:  LHALSSSATLSRFRSST------------------------------CLYFYPVEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKETHK
        L  LSSSATLSRFRSST                               +Y    +IADI D EISCY+LNLKENV+TRKPI  PSN KH V  S  E+  
Subjt:  LHALSSSATLSRFRSST------------------------------CLYFYPVEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKETHK

Query:  LFA------FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKT
        +        F K       NIAMEV+ADGQ +PGS NDAVF +  S SSSF ASTLDHLKLGLE YVL+HGSSL CDSCFPNRD+LRSGGGMVCEDKHKT
Subjt:  LFA------FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKT

Query:  TKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKA--EAT
        TKLVVEAAVV SE SNP+NNCFGAGCSDT+VLCFKDFAPCSISEA L+ALT IDWKRYGL LECAI+QRSHALLKWEH PLSFHIH+VVHCY K   EA 
Subjt:  TKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKA--EAT

Query:  PLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDR
        PL+Q+TRFDKKLIRKAVKLALDDFKNK+AG LLSADTLKIS+FAPDLAK IAGLV YS DMDFK+ECLAILGLQPH SEGEIV E IKKKIISAIE NDR
Subjt:  PLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDR

Query:  RPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        R QG KEVAPLLFE GRH+LQFVDDEC + GFD MDL
Subjt:  RPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

XP_023545219.1 type 2 DNA topoisomerase 6 subunit B-like [Cucurbita pepo subsp. pepo]4.6e-16377.24Show/hide
Query:  VEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVADGQYIPGSHNDAVFRENLS
        V   +I D EISCY+LNLKENV+TRKPI  PSN KHGVKFS  E                     K+      NIAMEV+ADGQ +PGS NDAVF E +S
Subjt:  VEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVADGQYIPGSHNDAVFRENLS

Query:  SSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAF
        +SSSF ASTLDHLKLGLE YVL+HGSSL CDSCFPNRD+LRSGGGMVCEDKHKTTKLVVEAAVV SEISNPTNNCFGAGCSDT+VLCFKDFAPCSISEA 
Subjt:  SSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAF

Query:  LEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKA--EATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPD
        L+ALT IDWKRYGL LECAI+QRSHALLKWEH PLSFHIH+VVHCY K   EA PL+Q+TRFDKKLIRKAVKLALDDFKNK+AG LLSADTLKIS+FAPD
Subjt:  LEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKA--EATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPD

Query:  LAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        LAK IAGLV YS DMDFK+ECLAILGLQPH SEGEIV E IKKKIISAIE NDRR QG KEVAPLLFE GRH+LQFVDDEC + GFD MDL
Subjt:  LAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

XP_038885430.1 type 2 DNA topoisomerase 6 subunit B-like isoform X1 [Benincasa hispida]1.6e-17178.79Show/hide
Query:  LYFYPVEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVADGQYIPGSHNDAVF
        +Y    EI DI DTEISCYQLNLKENV+TRKPIW PSN KHGVKFS  E                    H++   +  NIAMEVVADGQ IPGS NDAVF
Subjt:  LYFYPVEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVADGQYIPGSHNDAVF

Query:  RENLSSSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCS
         ENLSSSSSFTASTLDHLKLGLEDYVL+HGSS TCDSCFPNRDDLRSGGGMVCE+KHK TKLVVEAAVVISEISNPTNNCFG GCSDT+VLCFKDF PCS
Subjt:  RENLSSSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCS

Query:  ISEAFLEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHK--AEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKIS
        I+EAFL+ALT IDWKRYGLTLECAINQ SHALLKW   P SFHIH+VVHCYHK  AEATP+VQQTR+DKKLIRKAV+LALDDFKNKY GFLLSADTLKIS
Subjt:  ISEAFLEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHK--AEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKIS

Query:  RFAPDLAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        +FAPDLAK +AGLV YS+DMDFK ECL+ILGLQ H SEG IVEETIKK IISAIEGNDRRPQ +KEVAPLLFEDGR    FVDDECYK GFD MDL
Subjt:  RFAPDLAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

XP_038885431.1 type 2 DNA topoisomerase 6 subunit B-like isoform X2 [Benincasa hispida]1.0e-17079.28Show/hide
Query:  VEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVADGQYIPGSHNDAVFRENLS
        V+  DI DTEISCYQLNLKENV+TRKPIW PSN KHGVKFS  E                    H++   +  NIAMEVVADGQ IPGS NDAVF ENLS
Subjt:  VEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVADGQYIPGSHNDAVFRENLS

Query:  SSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAF
        SSSSFTASTLDHLKLGLEDYVL+HGSS TCDSCFPNRDDLRSGGGMVCE+KHK TKLVVEAAVVISEISNPTNNCFG GCSDT+VLCFKDF PCSI+EAF
Subjt:  SSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAF

Query:  LEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHK--AEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPD
        L+ALT IDWKRYGLTLECAINQ SHALLKW   P SFHIH+VVHCYHK  AEATP+VQQTR+DKKLIRKAV+LALDDFKNKY GFLLSADTLKIS+FAPD
Subjt:  LEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHK--AEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPD

Query:  LAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        LAK +AGLV YS+DMDFK ECL+ILGLQ H SEG IVEETIKK IISAIEGNDRRPQ +KEVAPLLFEDGR    FVDDECYK GFD MDL
Subjt:  LAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

XP_038885432.1 type 2 DNA topoisomerase 6 subunit B-like isoform X3 [Benincasa hispida]1.7e-17380.72Show/hide
Query:  LYFYPVEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS--------TKETHKLFA-----FHKNIAMEVVADGQYIPGSHNDAVFRENLSSS
        +Y    EI DI DTEISCYQLNLKENV+TRKPIW PSN KHGVKFS        ++    L A     FH+NIAMEVVADGQ IPGS NDAVF ENLSSS
Subjt:  LYFYPVEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS--------TKETHKLFA-----FHKNIAMEVVADGQYIPGSHNDAVFRENLSSS

Query:  SSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLE
        SSFTASTLDHLKLGLEDYVL+HGSS TCDSCFPNRDDLRSGGGMVCE+KHK TKLVVEAAVVISEISNPTNNCFG GCSDT+VLCFKDF PCSI+EAFL+
Subjt:  SSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLE

Query:  ALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHK--AEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLA
        ALT IDWKRYGLTLECAINQ SHALLKW   P SFHIH+VVHCYHK  AEATP+VQQTR+DKKLIRKAV+LALDDFKNKY GFLLSADTLKIS+FAPDLA
Subjt:  ALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHK--AEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLA

Query:  KVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        K +AGLV YS+DMDFK ECL+ILGLQ H SEG IVEETIKK IISAIEGNDRRPQ +KEVAPLLFEDGR    FVDDECYK GFD MDL
Subjt:  KVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

TrEMBL top hitse value%identityAlignment
A0A1S3BAV4 type 2 DNA topoisomerase 6 subunit B-like isoform X16.3e-15875.45Show/hide
Query:  VEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS--------TKETHKLFA-----FHK-------NIAMEVVADGQYIPGSHNDAVFRENLS
        V   +I DTEISCYQLNLKENV+TRKP+W PSN KH VKFS        ++    L A     FH+       NIAMEVVADGQ   GS NDAVF ENL 
Subjt:  VEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS--------TKETHKLFA-----FHK-------NIAMEVVADGQYIPGSHNDAVFRENLS

Query:  SSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAF
        S SSFTASTLD LKLG EDYVL HGSS TC+SCFPNRD+L+SGGGMVCEDKHK TKLVVEAAVVISEISNPT NCFGAGCSDT+VL FKDF PC+ISEAF
Subjt:  SSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAF

Query:  LEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHK--AEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPD
        L+ALT IDWKR+GLTLECAINQR HALLKWE TPLSFHIH+VVH Y K  A ATPLVQQTR DKKLI KAV+LAL+DFKNK+AGFLLS D LKISRFAPD
Subjt:  LEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHK--AEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPD

Query:  LAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        LAK IAGLV YS+DMDFK+ECLAILGLQPH SEGE+VEETIKKKIIS IE ND+RPQGIKEVA LLF  GR KLQ +D+ECY   FD MDL
Subjt:  LAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

A0A1S4DVL3 type 2 DNA topoisomerase 6 subunit B-like isoform X26.3e-15875.45Show/hide
Query:  VEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS--------TKETHKLFA-----FHK-------NIAMEVVADGQYIPGSHNDAVFRENLS
        V   +I DTEISCYQLNLKENV+TRKP+W PSN KH VKFS        ++    L A     FH+       NIAMEVVADGQ   GS NDAVF ENL 
Subjt:  VEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS--------TKETHKLFA-----FHK-------NIAMEVVADGQYIPGSHNDAVFRENLS

Query:  SSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAF
        S SSFTASTLD LKLG EDYVL HGSS TC+SCFPNRD+L+SGGGMVCEDKHK TKLVVEAAVVISEISNPT NCFGAGCSDT+VL FKDF PC+ISEAF
Subjt:  SSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAF

Query:  LEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHK--AEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPD
        L+ALT IDWKR+GLTLECAINQR HALLKWE TPLSFHIH+VVH Y K  A ATPLVQQTR DKKLI KAV+LAL+DFKNK+AGFLLS D LKISRFAPD
Subjt:  LEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHK--AEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPD

Query:  LAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        LAK IAGLV YS+DMDFK+ECLAILGLQPH SEGE+VEETIKKKIIS IE ND+RPQGIKEVA LLF  GR KLQ +D+ECY   FD MDL
Subjt:  LAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

A0A1S4DVN5 type 2 DNA topoisomerase 6 subunit B-like isoform X44.3e-15966.95Show/hide
Query:  MEFASLQDLYLHALSS--------------SATLSRFRSS---------------TCLYFY-----PVE--------------IADIFDTEISCYQLNLK
        MEFASLQDLYLH +SS              S  L R  +S               +C+  +     PVE                +I DTEISCYQLNLK
Subjt:  MEFASLQDLYLHALSS--------------SATLSRFRSS---------------TCLYFY-----PVE--------------IADIFDTEISCYQLNLK

Query:  ENVSTRKPIWQPSNSKHGVKFS--------TKETHKLFA-----FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTASTLDHLKLGLED
        ENV+TRKP+W PSN KH VKFS        ++    L A     FH+       NIAMEVVADGQ   GS NDAVF ENL S SSFTASTLD LKLG ED
Subjt:  ENVSTRKPIWQPSNSKHGVKFS--------TKETHKLFA-----FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTASTLDHLKLGLED

Query:  YVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEALTSIDWKRYGLTLECA
        YVL HGSS TC+SCFPNRD+L+SGGGMVCEDKHK TKLVVEAAVVISEISNPT NCFGAGCSDT+VL FKDF PC+ISEAFL+ALT IDWKR+GLTLECA
Subjt:  YVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEALTSIDWKRYGLTLECA

Query:  INQRSHALLKWEHTPLSFHIHVVVHCYHK--AEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIAGLVSYSHDMDFKK
        INQR HALLKWE TPLSFHIH+VVH Y K  A ATPLVQQTR DKKLI KAV+LAL+DFKNK+AGFLLS D LKISRFAPDLAK IAGLV YS+DMDFK+
Subjt:  INQRSHALLKWEHTPLSFHIHVVVHCYHK--AEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIAGLVSYSHDMDFKK

Query:  ECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        ECLAILGLQPH SEGE+VEETIKKKIIS IE ND+RPQGIKEVA LLF  GR KLQ +D+ECY   FD MDL
Subjt:  ECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

A0A6J1HCF2 type 2 DNA topoisomerase 6 subunit B-like isoform X61.2e-16176.47Show/hide
Query:  VEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVADGQYIPGSHNDAVFRENLS
        V   +I D EISCY+LNLKENV+TRKPI  PSN KHGVKFS  E                     K+      NIAMEV+ADGQ +PGS NDAVF E  S
Subjt:  VEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVADGQYIPGSHNDAVFRENLS

Query:  SSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAF
         SSSF ASTLDHLKLGLE YVL+HGSSL CDSCFPNRD+LRSGGGMVCEDKHKTTKLVVEAAVV SEI NPTNNCFGAGCSDT+VLCFKDFAPCSISEA 
Subjt:  SSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAF

Query:  LEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKA--EATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPD
        L+ALT IDWKRYGL LECAI+QRSHALLKWEH PLSFHIH+VVHCY K   EA PL+Q+TRFDKKLIRKAVKLALDDFKNK+AG LLSADTLKIS+FAPD
Subjt:  LEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKA--EATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPD

Query:  LAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        LAK IAGLV YS DMDFK+ECLAILGLQPH SEGEIV E IKKKIISAIE NDRR QG +EVAPLLFE GRH+LQ+VDDEC + GFD MDL
Subjt:  LAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

A0A6J1K810 type 2 DNA topoisomerase 6 subunit B-like isoform X58.7e-16075.96Show/hide
Query:  VEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVADGQYIPGSHNDAVFRENLS
        V   +I D EISCYQLNLKENV+TRKPI  PSN KHGVKFS  E                     K+      NIAMEV+ADGQ +PGS NDAVF E  S
Subjt:  VEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKET-------------------HKLFAFH-KNIAMEVVADGQYIPGSHNDAVFRENLS

Query:  SSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAF
         SSSF ASTLDHLK GLE YVL+HGSSL CDSCFPNRD+LRSGGGMVCEDKHKTTKLVVEAAVV +EISNPTNNCF AGCS+T+VLCFKDFAPCSISEA 
Subjt:  SSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAF

Query:  LEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCY--HKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPD
        L+ALT IDWKRYGL LECAI+QRSHALLKWEH PLSFHIH+VVHCY  H  EA PL+Q+TRFDKKLIRKAVKLALDDFKNK+AG LLSADTLKIS+FAPD
Subjt:  LEALTSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCY--HKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPD

Query:  LAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        LAK IAGLV YS DMDFK+ECLAILGLQPH SEGEIV E IK KIISAIE NDRR QG KEVAPLLFE GRH+LQFVDDEC + G D MDL
Subjt:  LAKVIAGLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

SwissProt top hitse value%identityAlignment
Q5Q0E6 Type 2 DNA topoisomerase 6 subunit B-like1.6e-6537.92Show/hide
Query:  DTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS-TKETHKLFA------------FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTA
        D E+  Y +NL E ++ ++   QPS +K+G KFS T+ +  +F             F K       N+ ++++      PG+    VF  N   +  FTA
Subjt:  DTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS-TKETHKLFA------------FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTA

Query:  STLDHLKLGLEDYVLKHGSSL--TCDSCFPNRDDLRSGGGMVC-EDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEAL
        S L+ LK GLEDYVL+H + L   CD CF +R+ L+ G G VC EDKHK     +E  +VIS++   T +C  +    TEVL F +F P  +    L AL
Subjt:  STLDHLKLGLEDYVLKHGSSL--TCDSCFPNRDDLRSGGGMVC-EDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEAL

Query:  TSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIA
          IDWK+YGL L    +Q  H  L+W++ P    I + +H YH     P  Q+      L++K +K ALD+ K K+ GFLLS+ + KI  + PDLA+ IA
Subjt:  TSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIA

Query:  GLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        GL+  S D+DF+ +CL++LG Q    E + VE  I++KI++ I  N+R+PQ  +E AP LF DG  +  F +DE  +G + S  L
Subjt:  GLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

Arabidopsis top hitse value%identityAlignment
AT1G60460.1 unknown protein1.2e-6538.24Show/hide
Query:  DTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS-TKETHKLFA------------FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTA
        D E+  Y +NL E ++ ++   QPS +K+G KFS T+ +  +F             F K       N+ ++++      PG+    VF  N   +  FTA
Subjt:  DTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS-TKETHKLFA------------FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTA

Query:  STLDHLKLGLEDYVLKHGSSL--TCDSCFPNRDDLRSGGGMVC-EDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEAL
        S L+ LK GLEDYVL+H + L   CD CF +R+ L+ G G VC EDKHK     +E  +VIS++   T +C  +    TEVL F +F P  +    L AL
Subjt:  STLDHLKLGLEDYVLKHGSSL--TCDSCFPNRDDLRSGGGMVC-EDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEAL

Query:  TSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIA
          IDWK+YGL L    +Q  H  L+W++ P    I + +H YH     P  Q+      L++K +K ALD+ K K+ GFLLS+ + KI  + PDLA+ IA
Subjt:  TSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIA

Query:  GLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDE
        GL+  S D+DF+ +CL++LG Q    E + VE  I++KI++ I  N+R+PQ  +E AP LF DG  +  F +DE
Subjt:  GLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDE

AT1G60460.2 unknown protein1.1e-6637.92Show/hide
Query:  DTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS-TKETHKLFA------------FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTA
        D E+  Y +NL E ++ ++   QPS +K+G KFS T+ +  +F             F K       N+ ++++      PG+    VF  N   +  FTA
Subjt:  DTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS-TKETHKLFA------------FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTA

Query:  STLDHLKLGLEDYVLKHGSSL--TCDSCFPNRDDLRSGGGMVC-EDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEAL
        S L+ LK GLEDYVL+H + L   CD CF +R+ L+ G G VC EDKHK     +E  +VIS++   T +C  +    TEVL F +F P  +    L AL
Subjt:  STLDHLKLGLEDYVLKHGSSL--TCDSCFPNRDDLRSGGGMVC-EDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEAL

Query:  TSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIA
          IDWK+YGL L    +Q  H  L+W++ P    I + +H YH     P  Q+      L++K +K ALD+ K K+ GFLLS+ + KI  + PDLA+ IA
Subjt:  TSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIA

Query:  GLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        GL+  S D+DF+ +CL++LG Q    E + VE  I++KI++ I  N+R+PQ  +E AP LF DG  +  F +DE  +G + S  L
Subjt:  GLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL

AT1G60460.3 unknown protein1.1e-6637.92Show/hide
Query:  DTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS-TKETHKLFA------------FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTA
        D E+  Y +NL E ++ ++   QPS +K+G KFS T+ +  +F             F K       N+ ++++      PG+    VF  N   +  FTA
Subjt:  DTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFS-TKETHKLFA------------FHK-------NIAMEVVADGQYIPGSHNDAVFRENLSSSSSFTA

Query:  STLDHLKLGLEDYVLKHGSSL--TCDSCFPNRDDLRSGGGMVC-EDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEAL
        S L+ LK GLEDYVL+H + L   CD CF +R+ L+ G G VC EDKHK     +E  +VIS++   T +C  +    TEVL F +F P  +    L AL
Subjt:  STLDHLKLGLEDYVLKHGSSL--TCDSCFPNRDDLRSGGGMVC-EDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEAL

Query:  TSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIA
          IDWK+YGL L    +Q  H  L+W++ P    I + +H YH     P  Q+      L++K +K ALD+ K K+ GFLLS+ + KI  + PDLA+ IA
Subjt:  TSIDWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIA

Query:  GLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL
        GL+  S D+DF+ +CL++LG Q    E + VE  I++KI++ I  N+R+PQ  +E AP LF DG  +  F +DE  +G + S  L
Subjt:  GLVSYSHDMDFKKECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTTGCTTCTCTTCAAGATCTCTACCTACATGCTCTCAGTTCTTCTGCAACGCTCTCCCGCTTCCGATCCTCCACTTGTTTGTATTTCTACCCTGTGGAGATTGC
AGATATTTTTGATACTGAGATAAGTTGCTATCAGTTGAATCTGAAAGAGAATGTCAGTACCAGGAAGCCAATTTGGCAACCTTCAAACAGTAAGCATGGTGTGAAATTCA
GCACGAAAGAAACTCATAAGCTTTTTGCATTTCACAAGAATATTGCAATGGAAGTTGTGGCCGACGGCCAGTATATCCCAGGGTCACATAATGATGCTGTTTTCCGGGAA
AACTTGTCCTCTAGTTCCTCTTTTACAGCCTCAACCCTTGATCATTTGAAATTGGGCCTTGAGGATTATGTATTAAAGCATGGATCTAGTTTGACGTGTGACTCTTGTTT
CCCTAACAGGGATGATCTGAGGAGTGGGGGTGGAATGGTTTGTGAAGACAAGCATAAAACTACCAAACTGGTAGTGGAGGCAGCGGTTGTGATTAGTGAAATATCAAATC
CGACCAATAATTGCTTTGGAGCAGGATGCTCTGATACAGAGGTTCTCTGTTTTAAAGATTTTGCACCTTGTTCGATCTCTGAGGCATTTCTAGAGGCATTAACAAGCATT
GACTGGAAACGTTATGGTTTGACTTTGGAATGTGCTATCAATCAAAGAAGCCATGCATTACTAAAGTGGGAACACACGCCCTTATCTTTTCATATTCATGTTGTTGTACA
CTGCTATCATAAGGCCGAAGCCACGCCACTGGTGCAGCAGACTCGGTTTGATAAAAAACTCATAAGAAAAGCAGTTAAACTTGCACTGGACGACTTCAAGAATAAATATG
CGGGATTTCTTCTCAGTGCCGATACCCTCAAGATCAGTAGGTTTGCCCCTGATCTTGCCAAAGTGATTGCTGGCCTAGTTTCATACTCCCATGACATGGATTTCAAAAAA
GAATGCCTTGCAATTCTTGGCTTGCAACCTCATCTATCAGAAGGTGAAATTGTTGAAGAAACTATAAAGAAAAAGATTATTTCAGCGATAGAGGGGAATGATAGAAGGCC
ACAAGGTATTAAAGAAGTTGCCCCTCTTCTGTTTGAAGATGGTCGCCACAAATTACAGTTTGTGGACGATGAATGTTACAAAGGTGGTTTTGATTCAATGGATTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAATTTGCTTCTCTTCAAGATCTCTACCTACATGCTCTCAGTTCTTCTGCAACGCTCTCCCGCTTCCGATCCTCCACTTGTTTGTATTTCTACCCTGTGGAGATTGC
AGATATTTTTGATACTGAGATAAGTTGCTATCAGTTGAATCTGAAAGAGAATGTCAGTACCAGGAAGCCAATTTGGCAACCTTCAAACAGTAAGCATGGTGTGAAATTCA
GCACGAAAGAAACTCATAAGCTTTTTGCATTTCACAAGAATATTGCAATGGAAGTTGTGGCCGACGGCCAGTATATCCCAGGGTCACATAATGATGCTGTTTTCCGGGAA
AACTTGTCCTCTAGTTCCTCTTTTACAGCCTCAACCCTTGATCATTTGAAATTGGGCCTTGAGGATTATGTATTAAAGCATGGATCTAGTTTGACGTGTGACTCTTGTTT
CCCTAACAGGGATGATCTGAGGAGTGGGGGTGGAATGGTTTGTGAAGACAAGCATAAAACTACCAAACTGGTAGTGGAGGCAGCGGTTGTGATTAGTGAAATATCAAATC
CGACCAATAATTGCTTTGGAGCAGGATGCTCTGATACAGAGGTTCTCTGTTTTAAAGATTTTGCACCTTGTTCGATCTCTGAGGCATTTCTAGAGGCATTAACAAGCATT
GACTGGAAACGTTATGGTTTGACTTTGGAATGTGCTATCAATCAAAGAAGCCATGCATTACTAAAGTGGGAACACACGCCCTTATCTTTTCATATTCATGTTGTTGTACA
CTGCTATCATAAGGCCGAAGCCACGCCACTGGTGCAGCAGACTCGGTTTGATAAAAAACTCATAAGAAAAGCAGTTAAACTTGCACTGGACGACTTCAAGAATAAATATG
CGGGATTTCTTCTCAGTGCCGATACCCTCAAGATCAGTAGGTTTGCCCCTGATCTTGCCAAAGTGATTGCTGGCCTAGTTTCATACTCCCATGACATGGATTTCAAAAAA
GAATGCCTTGCAATTCTTGGCTTGCAACCTCATCTATCAGAAGGTGAAATTGTTGAAGAAACTATAAAGAAAAAGATTATTTCAGCGATAGAGGGGAATGATAGAAGGCC
ACAAGGTATTAAAGAAGTTGCCCCTCTTCTGTTTGAAGATGGTCGCCACAAATTACAGTTTGTGGACGATGAATGTTACAAAGGTGGTTTTGATTCAATGGATTTGTAA
Protein sequenceShow/hide protein sequence
MEFASLQDLYLHALSSSATLSRFRSSTCLYFYPVEIADIFDTEISCYQLNLKENVSTRKPIWQPSNSKHGVKFSTKETHKLFAFHKNIAMEVVADGQYIPGSHNDAVFRE
NLSSSSSFTASTLDHLKLGLEDYVLKHGSSLTCDSCFPNRDDLRSGGGMVCEDKHKTTKLVVEAAVVISEISNPTNNCFGAGCSDTEVLCFKDFAPCSISEAFLEALTSI
DWKRYGLTLECAINQRSHALLKWEHTPLSFHIHVVVHCYHKAEATPLVQQTRFDKKLIRKAVKLALDDFKNKYAGFLLSADTLKISRFAPDLAKVIAGLVSYSHDMDFKK
ECLAILGLQPHLSEGEIVEETIKKKIISAIEGNDRRPQGIKEVAPLLFEDGRHKLQFVDDECYKGGFDSMDL