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HG10005192 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005192
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionSmall ubiquitin-related modifier 1
Genome locationChr07:366704..367249
RNA-Seq ExpressionHG10005192
SyntenyHG10005192
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061648.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa]2.8e-0844.23Show/hide
Query:  MSTAVNNDSDEETTRKPEPKPDSEYVNLKVNGQ--------------------------------------------------LEMEDGDEIDAMKHHGG
        MST++NN SDEETTRK EPKP+SEYVNLKVNGQ                                                  L +EDGDEIDAMKHH G
Subjt:  MSTAVNNDSDEETTRKPEPKPDSEYVNLKVNGQ--------------------------------------------------LEMEDGDEIDAMKHHGG

Query:  GGGG
        GGGG
Subjt:  GGGG
XP_031743856.1 small ubiquitin-related modifier 1-like [Cucumis sativus]1.5e-0641.9Show/hide
Query:  MSTAVNNDSDEETTRKPEPKPDSEYVNLKVNGQ--------------------------------------------------LEMEDGDEIDAMKHHGG
        MST +NN  DEETTRK +PKP+SEYVNLKVNGQ                                                  L +EDGDEIDAMKHH G
Subjt:  MSTAVNNDSDEETTRKPEPKPDSEYVNLKVNGQ--------------------------------------------------LEMEDGDEIDAMKHHGG

Query:  GGGGG
        GGG G
Subjt:  GGGGG
XP_038888534.1 small ubiquitin-related modifier 1-like isoform X1 [Benincasa hispida]2.8e-0845.19Show/hide
Query:  MSTAVNNDSDEETTRKPEPKPDSEYVNLKVNGQ--------------------------------------------------LEMEDGDEIDAMKHHGG
        MS A  NDSDEET RKPE KPDSEYVNLKVNGQ                                                  LEMEDGDEIDAMKHHGG
Subjt:  MSTAVNNDSDEETTRKPEPKPDSEYVNLKVNGQ--------------------------------------------------LEMEDGDEIDAMKHHGG

Query:  GGGG
        G  G
Subjt:  GGGG
XP_038888535.1 small ubiquitin-related modifier 1-like isoform X2 [Benincasa hispida]3.4e-0644Show/hide
Query:  MSTAVNNDSDEETTRKPEPKPDSEYVNLK------------------------------------VNG----------QLEMEDGDEIDAMKHHGGGGGG
        MS A  NDSDEET RKPE KPDSEYVNLK                                    ++G          +LEMEDGDEIDAMKHHGGG  G
Subjt:  MSTAVNNDSDEETTRKPEPKPDSEYVNLK------------------------------------VNG----------QLEMEDGDEIDAMKHHGGGGGG
TrEMBL top hitse value%identityAlignment
A0A5A7V249 Small ubiquitin-related modifier 11.3e-0844.23Show/hide
Query:  MSTAVNNDSDEETTRKPEPKPDSEYVNLKVNGQ--------------------------------------------------LEMEDGDEIDAMKHHGG
        MST++NN SDEETTRK EPKP+SEYVNLKVNGQ                                                  L +EDGDEIDAMKHH G
Subjt:  MSTAVNNDSDEETTRKPEPKPDSEYVNLKVNGQ--------------------------------------------------LEMEDGDEIDAMKHHGG

Query:  GGGG
        GGGG
Subjt:  GGGG
A0A6J1I0U8 small ubiquitin-related modifier 1-like isoform X29.9e-0436.79Show/hide
Query:  MSTAVNNDSDEETTRKPEPKPDSEYVNLKVNGQ--------------------------------------------------LEMEDGDEIDAMKHHGG
        MST + +++ E  TRKPE +P + YVN+KVNGQ                                                  L MEDGDEIDAMKHHGG
Subjt:  MSTAVNNDSDEETTRKPEPKPDSEYVNLKVNGQ--------------------------------------------------LEMEDGDEIDAMKHHGG

Query:  GGGGGQ
        GGGGG+
Subjt:  GGGGGQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACAGCGGTGAACAACGACAGTGATGAAGAAACAACCCGAAAACCCGAACCAAAACCCGATTCGGAGTATGTCAACCTCAAGGTCAATGGACAGCTGGAGATGGA
GGATGGGGATGAAATTGATGCTATGAAACACCACGGCGGAGGCGGCGGCGGCGGCCAAGGAGCAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGACAGCGGTGAACAACGACAGTGATGAAGAAACAACCCGAAAACCCGAACCAAAACCCGATTCGGAGTATGTCAACCTCAAGGTCAATGGACAGCTGGAGATGGA
GGATGGGGATGAAATTGATGCTATGAAACACCACGGCGGAGGCGGCGGCGGCGGCCAAGGAGCAATTTGA
Protein sequenceShow/hide protein sequence
MSTAVNNDSDEETTRKPEPKPDSEYVNLKVNGQLEMEDGDEIDAMKHHGGGGGGGQGAI