CuGenDBv2

Gene ID	HG10005216
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	60S ribosomal export protein NMD3
Genome location	Chr07:551817..553333
RNA-Seq Expression	HG10005216
Synteny	HG10005216
Gene Ontology terms	GO:0000055 - ribosomal large subunit export from nucleus (biological process) GO:0015031 - protein transport (biological process) GO:0005634 - nucleus (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domains	IPR007064 - Nmd3, N-terminal IPR039768 - Ribosomal export protein Nmd3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0036240.1 60S ribosomal export protein NMD3 [Cucumis melo var. makuwa]

8.2e-244

84.39

Show/hide

Query:  MDGEVGLFAVHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAE
        M  E GLFAV +TIG++LCCKCGIP+TPNAAN                              YLQPP+TWIK QLESKELLTFCIKRL+NLNK KLV+AE
Subjt:  MDGEVGLFAVHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAE

Query:  FVWTEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF
        FVWTEPHSKRIKVKLKVQKEV HGAI EQSY+VEYVVQDHLCESCSR+QANPDQWVASVQLRQH+ HRRTFFFLEQLILKHGAAA AIRIKQMDQGIDFF
Subjt:  FVWTEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF

Query:  FSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQ
        FSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAV LGNLGPLVICTKVTN IALLDPFTLRHCFLDADQ
Subjt:  FSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQ

Query:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI
        YWRTSFRSLLTSRQLVEY+VLDIENVSTEVNV GSKY+LA AQV RVSDFGRNDT+F I+THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI
Subjt:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI

Query:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSEGDR
        LIKKSYEEKRQ+K GKPRSWKLKSL MDVDD+ + +E+ MNS+YEQFLRDLEENPD+RFNISLYRNREYQPSE+TDGE DGPSVPL+ELLADLDLSEG+ 
Subjt:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSEGDR

Query:  DDAMHE
        DDAM+E
Subjt:  DDAMHE

XP_004143504.1 60S ribosomal export protein NMD3 [Cucumis sativus]

4.1e-243

84.19

Show/hide

Query:  MDGEVGLFAVHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAE
        M  E GLF+V +TIG++LCCKCGIP+ PNAAN                              YLQPP+TWIK QLESKELLTFCIKRL+NLNKVKLV+AE
Subjt:  MDGEVGLFAVHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAE

Query:  FVWTEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF
        FVWTEPHSKRIKVKLKVQKEV  GAI EQSY+ EYVVQDHLCESCSR+QANPDQWVASVQLRQH+ HRRTFFFLEQLILKHGAAA AIRIKQMDQGIDFF
Subjt:  FVWTEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF

Query:  FSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQ
        FSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAV LGNLGPLVICTKVTN IALLDPFTLRHCFLDADQ
Subjt:  FSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQ

Query:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI
        YWRTSFRSLLTSRQLVEY+VLDIENVSTEVNV GSKY+LA AQV RVSDFGRNDT+F I+THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI
Subjt:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI

Query:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSEGDR
        LIKKSYEEKRQ+KHGKPRSWKLKSL MDVDD+ + +E+ MNS+YEQFLRDLEENPD+RFNISLYRNREYQPSE+TDGE DGPSVPLEELLADLDLSEG+ 
Subjt:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSEGDR

Query:  DDAMHE
        DDAM+E
Subjt:  DDAMHE

XP_008440695.1 PREDICTED: 60S ribosomal export protein NMD3 [Cucumis melo]

2.8e-244

84.58

Show/hide

Query:  MDGEVGLFAVHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAE
        M  E GLFAV +TIG++LCCKCGIP+TPNAAN                              YLQPP+TWIK QLESKELLTFCIKRL+NLNKVKLV+AE
Subjt:  MDGEVGLFAVHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAE

Query:  FVWTEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF
        FVWTEPHSKRIKVKLKVQKEV HGAI EQSY+VEYVVQDHLCESCSR+QANPDQWVASVQLRQH+ HRRTFFFLEQLILKHGAAA AIRIKQMDQGIDFF
Subjt:  FVWTEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF

Query:  FSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQ
        FSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAV LGNLGPLVICTKVTN IALLDPFTLRHCFLDADQ
Subjt:  FSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQ

Query:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI
        YWRTSFRSLLTSRQLVEY+VLDIENVSTEVNV GSKY+LA AQV RVSDFGRNDT+F I+THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI
Subjt:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI

Query:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSEGDR
        LIKKSYEEKRQ+K GKPRSWKLKSL MDVDD+ + +E+ MNS+YEQFLRDLEENPD+RFNISLYRNREYQPSE+TDGE DGPSVPL+ELLADLDLSEG+ 
Subjt:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSEGDR

Query:  DDAMHE
        DDAM+E
Subjt:  DDAMHE

XP_022149109.1 60S ribosomal export protein NMD3 [Momordica charantia]

3.1e-243

84.39

Show/hide

Query:  MDGEVGLFAVHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAE
        M GE GLFAV +TIGS+LCCKCGIP+ PNAAN                              YLQPP+TWIK QLESKELLTFCIKRLKNLNKVKLV+AE
Subjt:  MDGEVGLFAVHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAE

Query:  FVWTEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF
        FVWTEPHSKRIKVKLKVQKEV +GAI EQSY+ EYVVQDH+CESCSRVQANPDQWVASVQLRQH+ HRRTFFFLEQLILKHGAAA AIRIKQMDQGIDFF
Subjt:  FVWTEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF

Query:  FSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQ
        FSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEI PICREDLICLPPKVAV LGNLGPLVICTKVTN IALLDPFTLRHCFLDADQ
Subjt:  FSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQ

Query:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI
        YWRTSFRSLLTSRQLVEYI+LDIENVS EVNVGGSKY+LADAQV RVSDFGRNDTIF IRTHLGHILNPGDYALGYDLY ANSNDMEL+KYKGL LPEAI
Subjt:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI

Query:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSEGDR
        L+KKSYEEKRQ+K GKPR+WKLKSL+MDVDD+GR ++D MNS+YEQFLRDLEENPD+RFNISLYRNREYQ SEMTDGE DGPSVPLEELLADLDLSE D 
Subjt:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSEGDR

Query:  DDAMHE
        DD M+E
Subjt:  DDAMHE

XP_038883907.1 60S ribosomal export protein NMD3 isoform X1 [Benincasa hispida]

1.2e-242

84.78

Show/hide

Query:  MDGEVGLFAVHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAE
        M  E GLFAV +TIGS+LCCKCGIP+ PNAAN                              YLQPP+TWIK QLESKELLTFCIKRLKNLNKVKLV+AE
Subjt:  MDGEVGLFAVHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAE

Query:  FVWTEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF
        FVWTEPHSKRIKVKLKVQKEV HGAI EQSY+VEYVVQDHLCESCSRVQANPDQWVASVQLRQH+ HRRTFFFLEQLILKHGAAA AIRIKQMDQGIDFF
Subjt:  FVWTEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF

Query:  FSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQ
        FSNRSHGVKFVEFIGKV  IRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAV LGNLGPLVICTKVTN IALLDPFTLRHCFLDA+Q
Subjt:  FSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQ

Query:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI
        YWRTSFRSLLTSRQLVEY+VLDIENVSTEVNV GSKY+LA AQV R+SDFGRNDTIF I+THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELP+AI
Subjt:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI

Query:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSEGDR
        LIKKSYEEKR +K GKPR+WKLKSLEMDVDD+G+AEED  NS+YEQFLRDLEENPD+RFNISLYRNREYQPSEMTDGE DGPSVPLEELLADLDLSEG+ 
Subjt:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSEGDR

Query:  DDAMHE
        D+ M E
Subjt:  DDAMHE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KGY6 60S ribosomal export protein NMD3

2.0e-243

84.19

Show/hide

Query:  MDGEVGLFAVHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAE
        M  E GLF+V +TIG++LCCKCGIP+ PNAAN                              YLQPP+TWIK QLESKELLTFCIKRL+NLNKVKLV+AE
Subjt:  MDGEVGLFAVHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAE

Query:  FVWTEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF
        FVWTEPHSKRIKVKLKVQKEV  GAI EQSY+ EYVVQDHLCESCSR+QANPDQWVASVQLRQH+ HRRTFFFLEQLILKHGAAA AIRIKQMDQGIDFF
Subjt:  FVWTEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF

Query:  FSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQ
        FSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAV LGNLGPLVICTKVTN IALLDPFTLRHCFLDADQ
Subjt:  FSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQ

Query:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI
        YWRTSFRSLLTSRQLVEY+VLDIENVSTEVNV GSKY+LA AQV RVSDFGRNDT+F I+THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI
Subjt:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI

Query:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSEGDR
        LIKKSYEEKRQ+KHGKPRSWKLKSL MDVDD+ + +E+ MNS+YEQFLRDLEENPD+RFNISLYRNREYQPSE+TDGE DGPSVPLEELLADLDLSEG+ 
Subjt:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSEGDR

Query:  DDAMHE
        DDAM+E
Subjt:  DDAMHE

A0A1S3B197 60S ribosomal export protein NMD3

1.4e-244

84.58

Show/hide

Query:  MDGEVGLFAVHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAE
        M  E GLFAV +TIG++LCCKCGIP+TPNAAN                              YLQPP+TWIK QLESKELLTFCIKRL+NLNKVKLV+AE
Subjt:  MDGEVGLFAVHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAE

Query:  FVWTEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF
        FVWTEPHSKRIKVKLKVQKEV HGAI EQSY+VEYVVQDHLCESCSR+QANPDQWVASVQLRQH+ HRRTFFFLEQLILKHGAAA AIRIKQMDQGIDFF
Subjt:  FVWTEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF

Query:  FSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQ
        FSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAV LGNLGPLVICTKVTN IALLDPFTLRHCFLDADQ
Subjt:  FSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQ

Query:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI
        YWRTSFRSLLTSRQLVEY+VLDIENVSTEVNV GSKY+LA AQV RVSDFGRNDT+F I+THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI
Subjt:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI

Query:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSEGDR
        LIKKSYEEKRQ+K GKPRSWKLKSL MDVDD+ + +E+ MNS+YEQFLRDLEENPD+RFNISLYRNREYQPSE+TDGE DGPSVPL+ELLADLDLSEG+ 
Subjt:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSEGDR

Query:  DDAMHE
        DDAM+E
Subjt:  DDAMHE

A0A5A7SYS9 60S ribosomal export protein NMD3

4.0e-244

84.39

Show/hide

Query:  MDGEVGLFAVHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAE
        M  E GLFAV +TIG++LCCKCGIP+TPNAAN                              YLQPP+TWIK QLESKELLTFCIKRL+NLNK KLV+AE
Subjt:  MDGEVGLFAVHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAE

Query:  FVWTEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF
        FVWTEPHSKRIKVKLKVQKEV HGAI EQSY+VEYVVQDHLCESCSR+QANPDQWVASVQLRQH+ HRRTFFFLEQLILKHGAAA AIRIKQMDQGIDFF
Subjt:  FVWTEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF

Query:  FSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQ
        FSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAV LGNLGPLVICTKVTN IALLDPFTLRHCFLDADQ
Subjt:  FSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQ

Query:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI
        YWRTSFRSLLTSRQLVEY+VLDIENVSTEVNV GSKY+LA AQV RVSDFGRNDT+F I+THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI
Subjt:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI

Query:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSEGDR
        LIKKSYEEKRQ+K GKPRSWKLKSL MDVDD+ + +E+ MNS+YEQFLRDLEENPD+RFNISLYRNREYQPSE+TDGE DGPSVPL+ELLADLDLSEG+ 
Subjt:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSEGDR

Query:  DDAMHE
        DDAM+E
Subjt:  DDAMHE

A0A5D3CM67 60S ribosomal export protein NMD3

1.4e-244

84.58

Show/hide

Query:  MDGEVGLFAVHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAE
        M  E GLFAV +TIG++LCCKCGIP+TPNAAN                              YLQPP+TWIK QLESKELLTFCIKRL+NLNKVKLV+AE
Subjt:  MDGEVGLFAVHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAE

Query:  FVWTEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF
        FVWTEPHSKRIKVKLKVQKEV HGAI EQSY+VEYVVQDHLCESCSR+QANPDQWVASVQLRQH+ HRRTFFFLEQLILKHGAAA AIRIKQMDQGIDFF
Subjt:  FVWTEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF

Query:  FSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQ
        FSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAV LGNLGPLVICTKVTN IALLDPFTLRHCFLDADQ
Subjt:  FSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQ

Query:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI
        YWRTSFRSLLTSRQLVEY+VLDIENVSTEVNV GSKY+LA AQV RVSDFGRNDT+F I+THLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI
Subjt:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI

Query:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSEGDR
        LIKKSYEEKRQ+K GKPRSWKLKSL MDVDD+ + +E+ MNS+YEQFLRDLEENPD+RFNISLYRNREYQPSE+TDGE DGPSVPL+ELLADLDLSEG+ 
Subjt:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSEGDR

Query:  DDAMHE
        DDAM+E
Subjt:  DDAMHE

A0A6J1D613 60S ribosomal export protein NMD3

1.5e-243

84.39

Show/hide

Query:  MDGEVGLFAVHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAE
        M GE GLFAV +TIGS+LCCKCGIP+ PNAAN                              YLQPP+TWIK QLESKELLTFCIKRLKNLNKVKLV+AE
Subjt:  MDGEVGLFAVHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAE

Query:  FVWTEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF
        FVWTEPHSKRIKVKLKVQKEV +GAI EQSY+ EYVVQDH+CESCSRVQANPDQWVASVQLRQH+ HRRTFFFLEQLILKHGAAA AIRIKQMDQGIDFF
Subjt:  FVWTEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFF

Query:  FSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQ
        FSNRSHGVKFVEF+GKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEI PICREDLICLPPKVAV LGNLGPLVICTKVTN IALLDPFTLRHCFLDADQ
Subjt:  FSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQ

Query:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI
        YWRTSFRSLLTSRQLVEYI+LDIENVS EVNVGGSKY+LADAQV RVSDFGRNDTIF IRTHLGHILNPGDYALGYDLY ANSNDMEL+KYKGL LPEAI
Subjt:  YWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAI

Query:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSEGDR
        L+KKSYEEKRQ+K GKPR+WKLKSL+MDVDD+GR ++D MNS+YEQFLRDLEENPD+RFNISLYRNREYQ SEMTDGE DGPSVPLEELLADLDLSE D 
Subjt:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSEGDR

Query:  DDAMHE
        DD M+E
Subjt:  DDAMHE

SwissProt top hits

e value

%identity

Alignment

Q08DS5 60S ribosomal export protein NMD3

1.7e-106

41.9

Show/hide

Query:  VHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLK-NLNKVKLVYAEFVWTEPHS
        V  T G ILCC CG+PI+PN AN                          + + Y QPP TW++  LES++LL  C+K++K  L+KV+LV A FVWTEPHS
Subjt:  VHKTIGSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLK-NLNKVKLVYAEFVWTEPHS

Query:  KRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGV
        KR+KVKL +QKEV +GAI +Q ++V+YVVQ  +C  C RV+A  D W A VQ+RQ  LH++TF++LEQLILK+G     +RIK++  G+DF++S++ H  
Subjt:  KRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGV

Query:  KFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQYWRTSFRS
        K VEF+    P R +  ++L+S D  SN +N+K TFSVEI PIC+++++CL PK+A  LGN+  + +C +VT+VI L+DP TL+   +D + +W   F S
Subjt:  KFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQYWRTSFRS

Query:  LLTSRQLVEYIVLD---IENVSTEVNVG--GSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIK
        L   +QL E+IV++   ++++      G    K+ L +  V + S+    D  +F RTHLGH+LNPGD  LG+DL   N ND  + K K   +P+ +LIK
Subjt:  LLTSRQLVEYIVLD---IENVSTEVNVG--GSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIK

Query:  KSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSE
        KSY+  R+++    R+WKLK L  D ++    +E     +Y+ FL DLEE+  +R N+++YR+    P E    ++  P + L E+L DL +S+
Subjt:  KSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSE

Q55BF2 60S ribosomal export protein NMD3

8.3e-106

44.54

Show/hide

Query:  SILCCKCGIPITPNAANK--------------------------LREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAEFVWTEPHSKRIKVKL
        +ILCC CG+ I  N +N                              YLQPP  W   +LES+ELLT CIKR+K LNKVKLV A +VWTEPHSKR+KVKL
Subjt:  SILCCKCGIPITPNAANK--------------------------LREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAEFVWTEPHSKRIKVKL

Query:  KVQKEVH-GAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGVKFVEFIG
         +QKEV   AI +Q +I+E++VQ   C+ C + +A  D W + VQLRQ + H+RTF ++EQLILKH A ++ + IK+   G+DFFFSNR+H +KFVEFI 
Subjt:  KVQKEVH-GAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGVKFVEFIG

Query:  KVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQYWRTSFRSLLTSRQL
         + P++++  +QL+S D ++N  N+K+TFSVEI P+ ++D++CLPPK+A  LGN+GPLV+ TKV+N+I  +DP TL    + A  +W + FR+L + +QL
Subjt:  KVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQYWRTSFRSLLTSRQL

Query:  VEYIVLDIENVSTEVNVGGS---KYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELE-KYKGLELPEAILIKKSYEEKRQ
        VE+ VLD       VN+ G+   +Y L+D Q+ R +DFG ND I+ IR+HLG+ILNPGD ALGYD+  +N  D +L    K  +LP+ +L+KK+Y  K  
Subjt:  VEYIVLDIENVSTEVNVGGS---KYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELE-KYKGLELPEAILIKKSYEEKRQ

Query:  KKHGKPRSWKLKSLEMD-VDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNRE
         +    R W  K +  + +++  + E D M    E+FLR++E +P++R  I++Y+  +
Subjt:  KKHGKPRSWKLKSLEMD-VDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNRE

Q5BLF0 60S ribosomal export protein NMD3

2.2e-106

41.84

Show/hide

Query:  GSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLK-NLNKVKLVYAEFVWTEPHSKRIKV
        G+ILCC CG+PI PN AN                          +   YLQPP +W++  LES+ELL  C+K+LK +++KV+L+ A F+WTEPHSKRIK+
Subjt:  GSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLK-NLNKVKLVYAEFVWTEPHSKRIKV

Query:  KLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGVKFVEF
        KL +QKEV +GAI +Q + VE+VVQ  +CE C RV+A  D W A VQ+RQ  +H++TF++LEQLILKH      +RIK++ +GIDF+++ + H  K V+F
Subjt:  KLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGVKFVEF

Query:  IGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQYWRTSFRSLLTSR
        +    P RS+  ++L+SHD  SN +N+K TFSVEI P+C+++++CL P++A  LGN+G + +C +VT+ I L+DP TL+   +D   +WR  F SL + R
Subjt:  IGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQYWRTSFRSLLTSR

Query:  QLVEYIVLDIENVSTE-----VNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEE
        QL E+I++DI+ +  +       +  +K+ LA+  V + S+   +   +  RT +GH+LN GD  LG+D   AN ND  L K     +P+ +LIKKSY+ 
Subjt:  QLVEYIVLDIENVSTE-----VNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEE

Query:  KRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDG-PSVPLEELLADLDLSE
          + K  + R WKLK ++ + D    A + +   +Y +FL DLEE+  +R NI+++R+    P E +D +DDG P + L E+L DL LS+
Subjt:  KRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDG-PSVPLEELLADLDLSE

Q6GNS3 60S ribosomal export protein NMD3

2.5e-110

43.35

Show/hide

Query:  GSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLK-NLNKVKLVYAEFVWTEPHSKRIKV
        G+ILCC+CGIPI PN AN                          +   YLQPP TWI+  LES+ELLT C+K+LK NL+KV+L+ A F+WTEPHSKR+KV
Subjt:  GSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLK-NLNKVKLVYAEFVWTEPHSKRIKV

Query:  KLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGVKFVEF
        KL +QKEV +GAI +Q ++V+YVVQ  +C+ C RV+A  D W A VQ+RQ +LH++TF++LEQ ILKH      +R+K++  G+DF+++++ HG K VEF
Subjt:  KLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGVKFVEF

Query:  IGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQYWRTSFRSLLTSR
        +    P R +  ++L+SHD  +N +N+K TFSVEI P+C+++L+CL PK+A  LGN+  + IC +VT+ I L+DP TL+   +D + YWR  F SL   +
Subjt:  IGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQYWRTSFRSLLTSR

Query:  QLVEYIVLDIENVSTEVNVGG-----SKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEE
        Q+ E+IV+D E +       G     +K++LA+  V + S+       +  RTHLGH+LNPGD  LG+DL   N ND  + K     +P+ +LIKKSY+ 
Subjt:  QLVEYIVLDIENVSTEVNVGG-----SKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEE

Query:  KRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSE
         R+++    R+WKLK  EMD D  G   +D    +Y+ FL DLEE+  +R N+++++N    P E    E+  P + L E+L DL +S+
Subjt:  KRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLSE

Q6P2Z6 60S ribosomal export protein NMD3

4.3e-110

43.35

Show/hide

Query:  GSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLK-NLNKVKLVYAEFVWTEPHSKRIKV
        G+ILCC+CGIPI PN AN                          +   YLQPP TWI+  LES+ELLT C+K+LK NL+KV+L+ A F+WTEPHSKR+KV
Subjt:  GSILCCKCGIPITPNAAN--------------------------KLREYLQPPQTWIKVQLESKELLTFCIKRLK-NLNKVKLVYAEFVWTEPHSKRIKV

Query:  KLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGVKFVEF
        KL +QKEV +GAI +Q ++V+Y+VQ  +C+ C RV+A  D W A VQ+RQ +LH++TF++LEQ ILKH      +R+K++  G+DF+++++ H  K VEF
Subjt:  KLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGVKFVEF

Query:  IGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQYWRTSFRSLLTSR
        +    P R +  ++L+SHD  +N +N+K TFSVEI P+C+++L+CL PK+A  LGN+  + IC +VT+ I L+DP TL+   +D + YWR+ F SL   +
Subjt:  IGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQYWRTSFRSLLTSR

Query:  QLVEYIVLDIENVSTEVNVGG-----SKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEE
        QL E+IV+D + V       G     +K+ILA+  V + S+       +  RTHLGH+LNPGD  LG+DL   N ND  + K     +P+ +LIKKSY+ 
Subjt:  QLVEYIVLDIENVSTEVNVGG-----SKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEE

Query:  -KRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLS
         KRQ++    R+WKLK +E D +     +E     +Y+ FL DLEE+  +R N+++Y+N    P E    E+  P + L E+L DL +S
Subjt:  -KRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSEMTDGEDDGPSVPLEELLADLDLS

Arabidopsis top hits

e value

%identity

Alignment

AT2G03820.1 nonsense-mediated mRNA decay NMD3 family protein

1.4e-180

64.82

Show/hide

Query:  EVGLFAVHKTIGSILCCKCGIPITPNAANK----LRE----------------------YLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAEFVW
        E G+F V +TIGS+LCCKCG+P+ PNAAN     LR                       YLQPP+TWIK Q ESKELLTFCIKRLKNLNKVKL  AEFVW
Subjt:  EVGLFAVHKTIGSILCCKCGIPITPNAANK----LRE----------------------YLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAEFVW

Query:  TEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSN
        TEPHSKRIKVKL VQ EV +GA+ EQSY VEY V+D+LCESCSR QANPDQWVAS+QLRQH+ HRRTFF+LEQLIL+H AA+RAIRI+Q+DQGIDFFF N
Subjt:  TEPHSKRIKVKLKVQKEV-HGAIFEQSYIVEYVVQDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSN

Query:  RSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQYWR
        +SH   FVEF+ KV PI  R D+QLVSHD KS+++N+K+T+SV+I P+CREDL+CLP KVA GLGNLGPLV+CTKV++ I LLDP TLR  FLDA QYWR
Subjt:  RSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVEISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQYWR

Query:  TSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYK---GLELPEAI
        + FRS LTSRQLV+Y V D+E    E  VGG KY L+  Q+ R SD G+   +F+++THLGHIL PGD ALGYD+YGAN ND E+EKY+      LPEAI
Subjt:  TSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIFFIRTHLGHILNPGDYALGYDLYGANSNDMELEKYK---GLELPEAI

Query:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDD-RGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSE---MTDGEDDGPSVPLEELLADLDLS
        LIKK YEE+R++K  K R+WKLKSL M++DD RGR + +  + +YE+FLRDLEENP++RFNISLYR+++YQ SE   MTDGE   PSVP+EELLADLDLS
Subjt:  LIKKSYEEKRQKKHGKPRSWKLKSLEMDVDD-RGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNREYQPSE---MTDGEDDGPSVPLEELLADLDLS

Query:  EGDRDD
          + DD
Subjt:  EGDRDD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATGGAGAAGTAGGATTGTTTGCAGTTCACAAGACCATTGGCAGTATCTTATGTTGCAAATGTGGAATTCCCATTACACCAAATGCTGCCAATAAATTGCGAGAGTA
CTTGCAGCCACCTCAAACTTGGATTAAAGTACAATTAGAATCAAAGGAGCTACTGACATTCTGTATCAAAAGGTTAAAGAATCTGAATAAGGTAAAGCTGGTATATGCTG
AATTTGTTTGGACTGAACCCCATTCCAAGAGGATCAAGGTCAAGTTGAAGGTTCAAAAAGAGGTCCATGGAGCAATTTTCGAACAATCCTACATTGTTGAGTATGTTGTA
CAGGATCACTTGTGTGAGTCCTGCTCAAGGGTCCAGGCCAACCCTGACCAATGGGTGGCTTCTGTTCAACTCAGGCAGCACATCTTGCACCGGCGTACGTTTTTCTTCTT
GGAGCAACTGATACTCAAGCACGGTGCTGCTGCTCGCGCCATAAGAATCAAACAGATGGATCAAGGTATTGACTTCTTCTTTTCTAATAGGAGTCATGGTGTTAAGTTTG
TGGAATTTATTGGAAAGGTTGCTCCGATTCGGAGTCGCCATGATAAACAACTTGTTTCTCATGATCCTAAGAGTAACATTCACAACCATAAGCACACTTTTTCTGTTGAA
ATATCCCCAATATGCCGTGAGGATTTGATATGTTTGCCTCCTAAAGTTGCTGTTGGTTTAGGCAATCTTGGTCCTCTTGTAATTTGCACTAAAGTTACAAATGTCATTGC
TTTACTTGATCCATTCACCTTAAGGCATTGCTTCTTGGATGCTGATCAGTATTGGCGGACATCCTTTAGGTCTCTACTTACGAGCAGGCAACTTGTGGAATATATTGTAT
TGGATATAGAGAATGTTTCTACTGAAGTCAATGTTGGTGGTTCGAAGTATATTTTGGCTGATGCTCAAGTAACTCGTGTATCGGATTTTGGAAGGAATGACACAATATTC
TTCATAAGAACCCATCTAGGACATATTCTAAACCCGGGGGATTATGCGCTTGGTTATGATCTTTATGGAGCCAATAGTAATGATATGGAGCTTGAAAAATATAAGGGTCT
TGAGCTTCCAGAGGCAATTTTAATCAAGAAGAGTTATGAAGAAAAGCGTCAAAAAAAGCATGGAAAGCCTCGATCATGGAAACTTAAATCTCTTGAAATGGATGTTGATG
ATAGGGGTAGAGCAGAGGAAGATAATATGAACTCAAAGTATGAACAGTTTTTGAGAGATTTGGAGGAGAATCCAGATATGAGGTTCAACATATCATTGTATCGAAATAGG
GAATACCAACCATCTGAAATGACTGATGGAGAAGATGACGGACCTTCGGTACCACTTGAAGAGTTGCTTGCTGATCTTGATCTAAGTGAAGGTGATAGAGATGATGCCAT
GCACGAGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDGEVGLFAVHKTIGSILCCKCGIPITPNAANKLREYLQPPQTWIKVQLESKELLTFCIKRLKNLNKVKLVYAEFVWTEPHSKRIKVKLKVQKEVHGAIFEQSYIVEYVV
QDHLCESCSRVQANPDQWVASVQLRQHILHRRTFFFLEQLILKHGAAARAIRIKQMDQGIDFFFSNRSHGVKFVEFIGKVAPIRSRHDKQLVSHDPKSNIHNHKHTFSVE
ISPICREDLICLPPKVAVGLGNLGPLVICTKVTNVIALLDPFTLRHCFLDADQYWRTSFRSLLTSRQLVEYIVLDIENVSTEVNVGGSKYILADAQVTRVSDFGRNDTIF
FIRTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSYEEKRQKKHGKPRSWKLKSLEMDVDDRGRAEEDNMNSKYEQFLRDLEENPDMRFNISLYRNR
EYQPSEMTDGEDDGPSVPLEELLADLDLSEGDRDDAMHE

HG10005216 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome