; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10005234 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005234
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationChr07:707687..708743
RNA-Seq ExpressionHG10005234
SyntenyHG10005234
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032472.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]1.1e-11262.26Show/hide
Query:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM--------------------------
        ME DVV+WN MILG AKCGEIDESRKLFDKMPV+N IS NSMIG YVRNGM KEALKLF+KMQEERIQ SEFTM                          
Subjt:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM--------------------------

Query:  -------------GKPCKC-----------------LSSWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF-------------------------
                        CKC                 LSSWNSMIFGLAVNGC+KEA+ LF+MLESSS KPDSISF                         
Subjt:  -------------GKPCKC-----------------LSSWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF-------------------------

Query:  -------------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAM
                           R GFLEEAEQFIKTMP+EGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEE+MGYVLM N+H WRNNFVGAME+RVAM
Subjt:  -------------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAM

Query:  RMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKGVFADEFEINEC
        RMKKVEKEPGG LIEVD EVHEFIA+GGRLH KAQEIY++L QLGVM+QDKG F +EFEINEC
Subjt:  RMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKGVFADEFEINEC

XP_004151347.1 pentatricopeptide repeat-containing protein At2g42920, chloroplastic [Cucumis sativus]3.7e-10861.17Show/hide
Query:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTMGK------------------------
        ME DVV+WN MILG AKCGEIDESRKLFDKMPV+NPIS NSMIG YVRNGM KEALKLF+KMQEERIQ SEFTM                          
Subjt:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTMGK------------------------

Query:  --------------------------------PCKCLSSWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF-------------------------
                                        PC+ LSSWNSMIFGLAVNGC+KEA+ +F+MLESSS KPD ISF                         
Subjt:  --------------------------------PCKCLSSWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF-------------------------

Query:  -------------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAM
                           RAGFLEEAEQFIKTMPIE DAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEE+MGYVLM N+H W NNFVGAME+RVAM
Subjt:  -------------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAM

Query:  RMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKGVFADEF
        RMKKVEKEPGG  IEVD EVHEFIA GGRLH KAQEIYI+L QLGVM+QDKG   DEF
Subjt:  RMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKGVFADEF

XP_008447140.1 PREDICTED: pentatricopeptide repeat-containing protein At2g42920, chloroplastic [Cucumis melo]3.8e-11362.53Show/hide
Query:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM--------------------------
        ME DVV+WN MILG AKCGEIDESRKLFDKMPV+N IS NSMIG YVRNGM KEALKLF+KMQEERIQ SEFTM                          
Subjt:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM--------------------------

Query:  -------------GKPCKC-----------------LSSWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF-------------------------
                        CKC                 LSSWNSMIFGLAVNGC+KEA+ LF+MLESSS KPDSISF                         
Subjt:  -------------GKPCKC-----------------LSSWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF-------------------------

Query:  -------------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAM
                           RAGFLEEAEQFIKTMP+EGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEE+MGYVLM N+H WRNNFVGAME+RVAM
Subjt:  -------------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAM

Query:  RMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKGVFADEFEINEC
        RMKKVEKEPGG LIEVD EVHEFIA+GGRLH KAQEIY++L QLGVM+QDKG F +EFEINEC
Subjt:  RMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKGVFADEFEINEC

XP_022148002.1 pentatricopeptide repeat-containing protein At2g42920, chloroplastic [Momordica charantia]6.3e-10059.09Show/hide
Query:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM--------------------------
        ME D VAWN MI+G AKCGEI ESRKLFD MP RNPIS NSMIG YVRNGM KEALKLFVKMQEE+I+ SEFTM                          
Subjt:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM--------------------------

Query:  -------------GKPCKC-----------------LSSWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF-------------------------
                        CKC                 LSSWNSMIFGLAVNGC+ EA+ LFRMLESSS +PDS+SF                         
Subjt:  -------------GKPCKC-----------------LSSWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF-------------------------

Query:  -------------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAM
                           RAGFLEEAEQ IKTMPIE DAI+WGCLLSACR  GNTE+AKRAAEKVNELDPEES G+VLM NVH W +NFVGAMEERV+M
Subjt:  -------------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAM

Query:  RMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKG
        RMK VEKEPGG LIEVDGEVHEFIA GGRLHPKAQEIYI+L QLGVM QD G
Subjt:  RMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKG

XP_022989190.1 pentatricopeptide repeat-containing protein At2g42920, chloroplastic [Cucurbita maxima]4.1e-9155.11Show/hide
Query:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM--------------------------
        ME DVVAWN MI G AKCGEIDE+RK+FDKMPVRNP+S NSMIG +VRNGM KEALKLFVKMQE+RIQ SE+TM                          
Subjt:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM--------------------------

Query:  ----------------------GK--------PCKCLSSWNSMIFGLAVNGCKKEAVFLFRMLESSSP-KPDSISF------------------------
                              GK        P + LSSWNSMIFGLAVNGC+ EAV LF+MLESSS  KPDS+SF                        
Subjt:  ----------------------GK--------PCKCLSSWNSMIFGLAVNGCKKEAVFLFRMLESSSP-KPDSISF------------------------

Query:  --------------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVA
                            RAGFLEEAE+ I+TMPIE D+IIWGCLLSACR YGNTEM KRAAEKV ELDPEESMGYV+M N+    N+FVGAMEERV+
Subjt:  --------------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVA

Query:  MRMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDK
        MRMKKV+KE G  +IEVD EVHEFIA GGR HPKA+EIY++L +LGV++ D+
Subjt:  MRMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDK

TrEMBL top hitse value%identityAlignment
A0A0A0K7F6 Uncharacterized protein1.8e-10861.17Show/hide
Query:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTMGK------------------------
        ME DVV+WN MILG AKCGEIDESRKLFDKMPV+NPIS NSMIG YVRNGM KEALKLF+KMQEERIQ SEFTM                          
Subjt:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTMGK------------------------

Query:  --------------------------------PCKCLSSWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF-------------------------
                                        PC+ LSSWNSMIFGLAVNGC+KEA+ +F+MLESSS KPD ISF                         
Subjt:  --------------------------------PCKCLSSWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF-------------------------

Query:  -------------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAM
                           RAGFLEEAEQFIKTMPIE DAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEE+MGYVLM N+H W NNFVGAME+RVAM
Subjt:  -------------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAM

Query:  RMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKGVFADEF
        RMKKVEKEPGG  IEVD EVHEFIA GGRLH KAQEIYI+L QLGVM+QDKG   DEF
Subjt:  RMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKGVFADEF

A0A1S3BG64 pentatricopeptide repeat-containing protein At2g42920, chloroplastic1.8e-11362.53Show/hide
Query:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM--------------------------
        ME DVV+WN MILG AKCGEIDESRKLFDKMPV+N IS NSMIG YVRNGM KEALKLF+KMQEERIQ SEFTM                          
Subjt:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM--------------------------

Query:  -------------GKPCKC-----------------LSSWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF-------------------------
                        CKC                 LSSWNSMIFGLAVNGC+KEA+ LF+MLESSS KPDSISF                         
Subjt:  -------------GKPCKC-----------------LSSWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF-------------------------

Query:  -------------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAM
                           RAGFLEEAEQFIKTMP+EGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEE+MGYVLM N+H WRNNFVGAME+RVAM
Subjt:  -------------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAM

Query:  RMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKGVFADEFEINEC
        RMKKVEKEPGG LIEVD EVHEFIA+GGRLH KAQEIY++L QLGVM+QDKG F +EFEINEC
Subjt:  RMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKGVFADEFEINEC

A0A5A7SN44 Pentatricopeptide repeat-containing protein5.3e-11362.26Show/hide
Query:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM--------------------------
        ME DVV+WN MILG AKCGEIDESRKLFDKMPV+N IS NSMIG YVRNGM KEALKLF+KMQEERIQ SEFTM                          
Subjt:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM--------------------------

Query:  -------------GKPCKC-----------------LSSWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF-------------------------
                        CKC                 LSSWNSMIFGLAVNGC+KEA+ LF+MLESSS KPDSISF                         
Subjt:  -------------GKPCKC-----------------LSSWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF-------------------------

Query:  -------------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAM
                           R GFLEEAEQFIKTMP+EGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEE+MGYVLM N+H WRNNFVGAME+RVAM
Subjt:  -------------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAM

Query:  RMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKGVFADEFEINEC
        RMKKVEKEPGG LIEVD EVHEFIA+GGRLH KAQEIY++L QLGVM+QDKG F +EFEINEC
Subjt:  RMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKGVFADEFEINEC

A0A6J1D3W1 pentatricopeptide repeat-containing protein At2g42920, chloroplastic3.0e-10059.09Show/hide
Query:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM--------------------------
        ME D VAWN MI+G AKCGEI ESRKLFD MP RNPIS NSMIG YVRNGM KEALKLFVKMQEE+I+ SEFTM                          
Subjt:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM--------------------------

Query:  -------------GKPCKC-----------------LSSWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF-------------------------
                        CKC                 LSSWNSMIFGLAVNGC+ EA+ LFRMLESSS +PDS+SF                         
Subjt:  -------------GKPCKC-----------------LSSWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF-------------------------

Query:  -------------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAM
                           RAGFLEEAEQ IKTMPIE DAI+WGCLLSACR  GNTE+AKRAAEKVNELDPEES G+VLM NVH W +NFVGAMEERV+M
Subjt:  -------------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAM

Query:  RMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKG
        RMK VEKEPGG LIEVDGEVHEFIA GGRLHPKAQEIYI+L QLGVM QD G
Subjt:  RMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKG

A0A6J1JLQ0 pentatricopeptide repeat-containing protein At2g42920, chloroplastic2.0e-9155.11Show/hide
Query:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM--------------------------
        ME DVVAWN MI G AKCGEIDE+RK+FDKMPVRNP+S NSMIG +VRNGM KEALKLFVKMQE+RIQ SE+TM                          
Subjt:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM--------------------------

Query:  ----------------------GK--------PCKCLSSWNSMIFGLAVNGCKKEAVFLFRMLESSSP-KPDSISF------------------------
                              GK        P + LSSWNSMIFGLAVNGC+ EAV LF+MLESSS  KPDS+SF                        
Subjt:  ----------------------GK--------PCKCLSSWNSMIFGLAVNGCKKEAVFLFRMLESSSP-KPDSISF------------------------

Query:  --------------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVA
                            RAGFLEEAE+ I+TMPIE D+IIWGCLLSACR YGNTEM KRAAEKV ELDPEESMGYV+M N+    N+FVGAMEERV+
Subjt:  --------------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVA

Query:  MRMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDK
        MRMKKV+KE G  +IEVD EVHEFIA GGR HPKA+EIY++L +LGV++ D+
Subjt:  MRMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDK

SwissProt top hitse value%identityAlignment
O23337 Pentatricopeptide repeat-containing protein At4g148204.4e-3231.32Show/hide
Query:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTMGKPCKCLSSWNSMIFGLAVNGCKKEA
        +E ++   N +I   AKCG +D +R +F+KMP RN +S +SMI     +G + +AL LF +M++E ++ +E T          +  +++G + +G  +E 
Subjt:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTMGKPCKCLSSWNSMIFGLAVNGCKKEA

Query:  VFLFRMLESS---SPKPD------SISFRAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFV
          +F  +      +PK +       +  RA  L EA + I++MP+  + +IWG L+SACRI+G  E+ K AA+++ EL+P+     VLM N++     + 
Subjt:  VFLFRMLESS---SPKPD------SISFRAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFV

Query:  GAMEERVAMRMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKGVFAD
             R  M  K V KE G   I+ +G+ HEF+  G + H ++ EIY  L ++   ++  G   D
Subjt:  GAMEERVAMRMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKGVFAD

O82380 Pentatricopeptide repeat-containing protein At2g29760, chloroplastic1.3e-3130.89Show/hide
Query:  AKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTMGKPCKCLSSWNSMIFGLAVNGCKKEAVFLFRMLESS-SPKP
        +KCG++++SR++F+ +  R+    ++MIG    +G   EA+ +F KMQE  ++ +  T          + ++    +  G   EA  LF  +ES+    P
Subjt:  AKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTMGKPCKCLSSWNSMIFGLAVNGCKKEAVFLFRMLESS-SPKP

Query:  DSISF--------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAMRMKKVE
        +   +        R+G+LE+A +FI+ MPI     +WG LL AC+I+ N  +A+ A  ++ EL+P     +VL+ N++     +    E R  MR+  ++
Subjt:  DSISF--------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAMRMKKVE

Query:  KEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKG
        KEPG   IE+DG +HEF+ SG   HP ++++Y  LH++   ++  G
Subjt:  KEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKG

Q9SJG6 Pentatricopeptide repeat-containing protein At2g42920, chloroplastic2.4e-5438.94Show/hide
Query:  DVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM-----------------------------
        DVVAWN MI+G AKCG ID+++ LFD+MP RN +S NSMI  +VRNG  K+AL +F +MQE+ ++   FTM                             
Subjt:  DVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM-----------------------------

Query:  ----------GKPCKC-----------------LSSWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF----------------------------
                     CKC                 LS WNSMI GLA NG ++ A+ LF  LE S  +PDS+SF                            
Subjt:  ----------GKPCKC-----------------LSSWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF----------------------------

Query:  ----------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAMRMK
                         AG LEEAE  IK MP+E D +IW  LLSACR  GN EMAKRAA+ + +LDP+E+ GYVL+ N +     F  A+E+R+ M+ +
Subjt:  ----------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAMRMK

Query:  KVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQD-KGVFADEFE
        ++EKE G   IEVD EVHEFI+ GG  HPK+ EIY +L  L   +   K  FA+ F+
Subjt:  KVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQD-KGVFADEFE

Q9SJZ3 Pentatricopeptide repeat-containing protein At2g22410, mitochondrial7.6e-3229.41Show/hide
Query:  VVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM------------------------------
        +V+W  MI G A+CG +D SRKLFD M  ++ +  N+MIG  V+    ++AL LF +MQ    +  E TM                              
Subjt:  VVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM------------------------------

Query:  ---------------GKPCKCLS-----------SWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF-----------------------------
                       G   + LS           ++ ++I GLA++G    A+  F  +  +   PD I+F                             
Subjt:  ---------------GKPCKCLS-----------SWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF-----------------------------

Query:  ---------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAMRMKK
                       RAG LEEA++ +++MP+E DA +WG LL  CR++GN E+ ++AA+K+ ELDP +S  YVL+  ++   N +  A   R  M  + 
Subjt:  ---------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAMRMKK

Query:  VEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDK-GVFADEFEI
        VEK PG   IEV+G V EFI    +  P++++IY  LH LG  M+    V   E+EI
Subjt:  VEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDK-GVFADEFEI

Q9SY02 Pentatricopeptide repeat-containing protein At4g027508.1e-3434.52Show/hide
Query:  NFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTMGKPCKCLSSWNSMIFGLAVNGCKKEAVFLFRMLE
        N ++L   KCG I+E+  LF +M  ++ +S N+MI  Y R+G  + AL+ F  M+ E ++  + TM       S       GL   G +    + + M +
Subjt:  NFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTMGKPCKCLSSWNSMIFGLAVNGCKKEAVFLFRMLE

Query:  SSSPKPDSISF--------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAM
             P+S  +        RAG LE+A   +K MP E DA IWG LL A R++GNTE+A+ AA+K+  ++PE S  YVL+ N++     +    + RV M
Subjt:  SSSPKPDSISF--------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAM

Query:  RMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKG
        R K V+K PG   IE+  + H F + G   HP+  EI+  L +L + M+  G
Subjt:  RMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKG

Arabidopsis top hitse value%identityAlignment
AT2G22410.1 SLOW GROWTH 15.4e-3329.41Show/hide
Query:  VVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM------------------------------
        +V+W  MI G A+CG +D SRKLFD M  ++ +  N+MIG  V+    ++AL LF +MQ    +  E TM                              
Subjt:  VVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM------------------------------

Query:  ---------------GKPCKCLS-----------SWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF-----------------------------
                       G   + LS           ++ ++I GLA++G    A+  F  +  +   PD I+F                             
Subjt:  ---------------GKPCKCLS-----------SWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF-----------------------------

Query:  ---------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAMRMKK
                       RAG LEEA++ +++MP+E DA +WG LL  CR++GN E+ ++AA+K+ ELDP +S  YVL+  ++   N +  A   R  M  + 
Subjt:  ---------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAMRMKK

Query:  VEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDK-GVFADEFEI
        VEK PG   IEV+G V EFI    +  P++++IY  LH LG  M+    V   E+EI
Subjt:  VEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDK-GVFADEFEI

AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.2e-3330.89Show/hide
Query:  AKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTMGKPCKCLSSWNSMIFGLAVNGCKKEAVFLFRMLESS-SPKP
        +KCG++++SR++F+ +  R+    ++MIG    +G   EA+ +F KMQE  ++ +  T          + ++    +  G   EA  LF  +ES+    P
Subjt:  AKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTMGKPCKCLSSWNSMIFGLAVNGCKKEAVFLFRMLESS-SPKP

Query:  DSISF--------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAMRMKKVE
        +   +        R+G+LE+A +FI+ MPI     +WG LL AC+I+ N  +A+ A  ++ EL+P     +VL+ N++     +    E R  MR+  ++
Subjt:  DSISF--------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAMRMKKVE

Query:  KEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKG
        KEPG   IE+DG +HEF+ SG   HP ++++Y  LH++   ++  G
Subjt:  KEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKG

AT2G42920.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.7e-5538.94Show/hide
Query:  DVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM-----------------------------
        DVVAWN MI+G AKCG ID+++ LFD+MP RN +S NSMI  +VRNG  K+AL +F +MQE+ ++   FTM                             
Subjt:  DVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTM-----------------------------

Query:  ----------GKPCKC-----------------LSSWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF----------------------------
                     CKC                 LS WNSMI GLA NG ++ A+ LF  LE S  +PDS+SF                            
Subjt:  ----------GKPCKC-----------------LSSWNSMIFGLAVNGCKKEAVFLFRMLESSSPKPDSISF----------------------------

Query:  ----------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAMRMK
                         AG LEEAE  IK MP+E D +IW  LLSACR  GN EMAKRAA+ + +LDP+E+ GYVL+ N +     F  A+E+R+ M+ +
Subjt:  ----------------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAMRMK

Query:  KVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQD-KGVFADEFE
        ++EKE G   IEVD EVHEFI+ GG  HPK+ EIY +L  L   +   K  FA+ F+
Subjt:  KVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQD-KGVFADEFE

AT4G02750.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.8e-3534.52Show/hide
Query:  NFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTMGKPCKCLSSWNSMIFGLAVNGCKKEAVFLFRMLE
        N ++L   KCG I+E+  LF +M  ++ +S N+MI  Y R+G  + AL+ F  M+ E ++  + TM       S       GL   G +    + + M +
Subjt:  NFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTMGKPCKCLSSWNSMIFGLAVNGCKKEAVFLFRMLE

Query:  SSSPKPDSISF--------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAM
             P+S  +        RAG LE+A   +K MP E DA IWG LL A R++GNTE+A+ AA+K+  ++PE S  YVL+ N++     +    + RV M
Subjt:  SSSPKPDSISF--------RAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAM

Query:  RMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKG
        R K V+K PG   IE+  + H F + G   HP+  EI+  L +L + M+  G
Subjt:  RMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKG

AT4G14820.1 Pentatricopeptide repeat (PPR) superfamily protein3.2e-3331.32Show/hide
Query:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTMGKPCKCLSSWNSMIFGLAVNGCKKEA
        +E ++   N +I   AKCG +D +R +F+KMP RN +S +SMI     +G + +AL LF +M++E ++ +E T          +  +++G + +G  +E 
Subjt:  MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTMGKPCKCLSSWNSMIFGLAVNGCKKEA

Query:  VFLFRMLESS---SPKPD------SISFRAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFV
          +F  +      +PK +       +  RA  L EA + I++MP+  + +IWG L+SACRI+G  E+ K AA+++ EL+P+     VLM N++     + 
Subjt:  VFLFRMLESS---SPKPD------SISFRAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFV

Query:  GAMEERVAMRMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKGVFAD
             R  M  K V KE G   I+ +G+ HEF+  G + H ++ EIY  L ++   ++  G   D
Subjt:  GAMEERVAMRMKKVEKEPGGGLIEVDGEVHEFIASGGRLHPKAQEIYIILHQLGVMMQDKGVFAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACTTGATGTCGTTGCCTGGAATTTCATGATTCTGGGTCCGGCTAAATGTGGGGAAATTGATGAGTCGAGAAAGCTGTTCGATAAAATGCCTGTTAGAAATCCAAT
CTCTCGGAATTCTATGATTGGTGTGTATGTTAGAAATGGGATGTCCAAAGAAGCTCTGAAGCTGTTTGTCAAAATGCAGGAAGAGAGAATCCAGTCTAGTGAGTTTACTA
TGGGAAAGCCCTGCAAGTGTTTATCCAGTTGGAACTCCATGATCTTTGGCCTGGCAGTGAATGGCTGCAAAAAGGAAGCAGTTTTTCTGTTCAGAATGCTGGAATCTTCA
AGTCCTAAACCAGATTCTATTAGCTTCCGAGCTGGGTTTCTTGAAGAAGCAGAGCAGTTCATAAAAACGATGCCGATTGAGGGAGATGCAATCATATGGGGGTGCTTGCT
CTCAGCTTGTAGAATATATGGGAACACAGAAATGGCAAAGAGGGCAGCAGAGAAAGTTAATGAATTGGATCCAGAAGAAAGCATGGGTTATGTTCTAATGGTGAATGTTC
ATACTTGGAGGAATAACTTTGTGGGAGCAATGGAGGAAAGGGTTGCAATGAGGATGAAGAAGGTGGAGAAAGAACCAGGGGGCGGTCTGATTGAAGTTGATGGTGAAGTT
CATGAGTTCATAGCGAGTGGTGGGAGGTTGCATCCTAAAGCTCAAGAGATCTACATTATATTGCATCAATTGGGAGTAATGATGCAAGATAAAGGAGTTTTTGCAGATGA
ATTTGAAATAAATGAGTGCAAATTTGTTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACTTGATGTCGTTGCCTGGAATTTCATGATTCTGGGTCCGGCTAAATGTGGGGAAATTGATGAGTCGAGAAAGCTGTTCGATAAAATGCCTGTTAGAAATCCAAT
CTCTCGGAATTCTATGATTGGTGTGTATGTTAGAAATGGGATGTCCAAAGAAGCTCTGAAGCTGTTTGTCAAAATGCAGGAAGAGAGAATCCAGTCTAGTGAGTTTACTA
TGGGAAAGCCCTGCAAGTGTTTATCCAGTTGGAACTCCATGATCTTTGGCCTGGCAGTGAATGGCTGCAAAAAGGAAGCAGTTTTTCTGTTCAGAATGCTGGAATCTTCA
AGTCCTAAACCAGATTCTATTAGCTTCCGAGCTGGGTTTCTTGAAGAAGCAGAGCAGTTCATAAAAACGATGCCGATTGAGGGAGATGCAATCATATGGGGGTGCTTGCT
CTCAGCTTGTAGAATATATGGGAACACAGAAATGGCAAAGAGGGCAGCAGAGAAAGTTAATGAATTGGATCCAGAAGAAAGCATGGGTTATGTTCTAATGGTGAATGTTC
ATACTTGGAGGAATAACTTTGTGGGAGCAATGGAGGAAAGGGTTGCAATGAGGATGAAGAAGGTGGAGAAAGAACCAGGGGGCGGTCTGATTGAAGTTGATGGTGAAGTT
CATGAGTTCATAGCGAGTGGTGGGAGGTTGCATCCTAAAGCTCAAGAGATCTACATTATATTGCATCAATTGGGAGTAATGATGCAAGATAAAGGAGTTTTTGCAGATGA
ATTTGAAATAAATGAGTGCAAATTTGTTGTTTAA
Protein sequenceShow/hide protein sequence
MELDVVAWNFMILGPAKCGEIDESRKLFDKMPVRNPISRNSMIGVYVRNGMSKEALKLFVKMQEERIQSSEFTMGKPCKCLSSWNSMIFGLAVNGCKKEAVFLFRMLESS
SPKPDSISFRAGFLEEAEQFIKTMPIEGDAIIWGCLLSACRIYGNTEMAKRAAEKVNELDPEESMGYVLMVNVHTWRNNFVGAMEERVAMRMKKVEKEPGGGLIEVDGEV
HEFIASGGRLHPKAQEIYIILHQLGVMMQDKGVFADEFEINECKFVV