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HG10005244 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005244
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncysteine-rich and transmembrane domain-containing protein A-like
Genome locationChr07:769429..770617
RNA-Seq ExpressionHG10005244
SyntenyHG10005244
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646099.1 hypothetical protein Csa_015748 [Cucumis sativus]4.9e-1284.44Show/hide
Query:  MSQYSHQEIPMGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPI
        MSQY +QEI MGYPAPPPSY AGEQ K GKSGPYVAAPPPVGYP+
Subjt:  MSQYSHQEIPMGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPI

KAG6589304.1 hypothetical protein SDJN03_17869, partial [Cucurbita argyrosperma subsp. sororia]7.1e-1177.78Show/hide
Query:  MSQYSHQEIPMGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPI
        MSQY HQ+IPM YPAPPPSYPA E+ K   SGPYVAAPPPVGYP+
Subjt:  MSQYSHQEIPMGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPI

KAG7023002.1 hypothetical protein SDJN02_16738, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-1177.78Show/hide
Query:  MSQYSHQEIPMGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPI
        MSQY HQ+IPM YPAPPPSYPA E+ K   SGPYVAAPPPVGYP+
Subjt:  MSQYSHQEIPMGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPI

XP_008447127.1 PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo]4.9e-1284.44Show/hide
Query:  MSQYSHQEIPMGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPI
        MSQY +QEI MGYPAPPPSY AGEQ K GKSGPYVAAPPPVGYP+
Subjt:  MSQYSHQEIPMGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPI

XP_011659032.1 cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus]4.9e-1284.44Show/hide
Query:  MSQYSHQEIPMGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPI
        MSQY +QEI MGYPAPPPSY AGEQ K GKSGPYVAAPPPVGYP+
Subjt:  MSQYSHQEIPMGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPI

TrEMBL top hitse value%identityAlignment
A0A0A0K5N8 CYSTM domain-containing protein2.4e-1284.44Show/hide
Query:  MSQYSHQEIPMGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPI
        MSQY +QEI MGYPAPPPSY AGEQ K GKSGPYVAAPPPVGYP+
Subjt:  MSQYSHQEIPMGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPI

A0A1S3BHK1 cysteine-rich and transmembrane domain-containing protein A-like2.4e-1284.44Show/hide
Query:  MSQYSHQEIPMGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPI
        MSQY +QEI MGYPAPPPSY AGEQ K GKSGPYVAAPPPVGYP+
Subjt:  MSQYSHQEIPMGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPI

A0A5A7USJ3 Cysteine-rich and transmembrane domain-containing protein A-like2.4e-1284.44Show/hide
Query:  MSQYSHQEIPMGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPI
        MSQY +QEI MGYPAPPPSY AGEQ K GKSGPYVAAPPPVGYP+
Subjt:  MSQYSHQEIPMGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPI

A0A6J1D469 cysteine-rich and transmembrane domain-containing protein B-like1.2e-0875.56Show/hide
Query:  MSQYSHQEIPMGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPI
        MSQY  QEIPM YPAPPPSYPA EQ K    GPYV APPPVGYP+
Subjt:  MSQYSHQEIPMGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPI

A0A6J1JEV3 cysteine-rich and transmembrane domain-containing protein B-like isoform X25.7e-0677.14Show/hide
Query:  MGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPI
        M YPAPPPSYPA E+ K   SGPYVAAPPPVGYP+
Subjt:  MGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCAATATAGCCACCAAGAAATTCCCATGGGCTATCCAGCGCCGCCACCGTCGTATCCGGCGGGAGAGCAAGATAAAGTGGGGAAATCAGGGCCTTATGTTGCAGC
TCCGCCTCCGGTTGGATATCCGATTGTGTCTTCTGAAGATGCTGACTTAGCTACATTATTGGTTGCTGGTTTGGTTGAGATGAGACTTGTTTTTCAGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTCAATATAGCCACCAAGAAATTCCCATGGGCTATCCAGCGCCGCCACCGTCGTATCCGGCGGGAGAGCAAGATAAAGTGGGGAAATCAGGGCCTTATGTTGCAGC
TCCGCCTCCGGTTGGATATCCGATTGTGTCTTCTGAAGATGCTGACTTAGCTACATTATTGGTTGCTGGTTTGGTTGAGATGAGACTTGTTTTTCAGTTTTAG
Protein sequenceShow/hide protein sequence
MSQYSHQEIPMGYPAPPPSYPAGEQDKVGKSGPYVAAPPPVGYPIVSSEDADLATLLVAGLVEMRLVFQF