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HG10005266 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005266
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDefensin-like protein 3
Genome locationChr07:1028388..1028710
RNA-Seq ExpressionHG10005266
SyntenyHG10005266
Gene Ontology termsGO:0006952 - defense response (biological process)
InterPro domainsIPR008176 - Defensin, plant
IPR036574 - Knottin, scorpion toxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AHA50469.1 defensin-like protein 3 [Citrullus lanatus]4.1e-2063.16Show/hide
Query:  MAGSEGWRKLTFAVFIFLALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKACNNDMWYDGFCSNGLCICTVPC
        MAGSE WRKLT  +FIFL+LASGW V ETEG+ CY+ SPSFKG+C+S + C+  C      DGFC++G CICTVPC
Subjt:  MAGSEGWRKLTFAVFIFLALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKACNNDMWYDGFCSNGLCICTVPC

KAA0062794.1 defensin-like protein 3 [Cucumis melo var. makuwa]1.2e-2471.05Show/hide
Query:  MAGSEGWRKLTFAVFIFLALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKACNNDMWYDGFCSNGLCICTVPC
        MAG   W+KLTF  F+FL++ASGW + ETEGK C+KQSPSFKG+CTS D CVKAC+ DMWY+G CSNGLCICTV C
Subjt:  MAGSEGWRKLTFAVFIFLALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKACNNDMWYDGFCSNGLCICTVPC

KGN44293.1 hypothetical protein Csa_016568 [Cucumis sativus]4.6e-2472.73Show/hide
Query:  MAGSEGWRKLTFAVFIF-LALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKACNNDMWYDGFCSNGLCICTVPC
        MAG  GW+KLTF  FIF LA+ASGW ++ET GK C+KQS SFKG+C S D CVKAC+ DMWYDGFCSNGLCICTV C
Subjt:  MAGSEGWRKLTFAVFIF-LALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKACNNDMWYDGFCSNGLCICTVPC

XP_031744629.1 defensin-1-like [Cucumis sativus]2.1e-1658.33Show/hide
Query:  EGWRKLTFAVFIFLALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKACNNDMWYDGFCSNGLCICTVPC
        EGWRKLT  +FI L+LASGW V ETEG+ CY+ SP  KG C+S D C+  C      DGFCS+G C+C VPC
Subjt:  EGWRKLTFAVFIFLALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKACNNDMWYDGFCSNGLCICTVPC

XP_038887289.1 defensin-like protein 2 [Benincasa hispida]9.0e-2877.63Show/hide
Query:  MAGSEGWRKLTFAVFIFLALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKACNNDMWYDGFCSNGLCICTVPC
        MAG EGWRKLT  +FIFLALASGW V+ETEGKTC+KQSPSF+GQCTS + CV AC+NDMWY+G+CSNGLCIC V C
Subjt:  MAGSEGWRKLTFAVFIFLALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKACNNDMWYDGFCSNGLCICTVPC

TrEMBL top hitse value%identityAlignment
A0A0A0K447 Uncharacterized protein2.2e-2472.73Show/hide
Query:  MAGSEGWRKLTFAVFIF-LALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKACNNDMWYDGFCSNGLCICTVPC
        MAG  GW+KLTF  FIF LA+ASGW ++ET GK C+KQS SFKG+C S D CVKAC+ DMWYDGFCSNGLCICTV C
Subjt:  MAGSEGWRKLTFAVFIF-LALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKACNNDMWYDGFCSNGLCICTVPC

A0A5A7V3H5 Defensin-like protein 31.6e-1454.67Show/hide
Query:  GSEGWRKLTFAVFIFLALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKAC-NNDMWYDGFCSNGLCICTVPC
        G EG RKLT  V IFL  ASGW V++TEG TCYK S +F+G C S + C + C   + W DGFCS   CICT  C
Subjt:  GSEGWRKLTFAVFIFLALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKAC-NNDMWYDGFCSNGLCICTVPC

A0A5D3BCI9 Defensin-like protein 35.9e-2571.05Show/hide
Query:  MAGSEGWRKLTFAVFIFLALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKACNNDMWYDGFCSNGLCICTVPC
        MAG   W+KLTF  F+FL++ASGW + ETEGK C+KQSPSFKG+CTS D CVKAC+ DMWY+G CSNGLCICTV C
Subjt:  MAGSEGWRKLTFAVFIFLALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKACNNDMWYDGFCSNGLCICTVPC

A0A6J1EUK4 defensin Tk-AMP-D4-like4.0e-1354.55Show/hide
Query:  MAGSEGWRKLTFAVFIFLALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKAC-NNDMWYDGFCSNGLCICTVPC
        MAG +  R L   VFIFLALASGW V++TEG+TCYK + +F G CTS  AC   C   + W DGFCS   C CT  C
Subjt:  MAGSEGWRKLTFAVFIFLALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKAC-NNDMWYDGFCSNGLCICTVPC

W5RQN1 Defensin-like protein 32.0e-2063.16Show/hide
Query:  MAGSEGWRKLTFAVFIFLALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKACNNDMWYDGFCSNGLCICTVPC
        MAGSE WRKLT  +FIFL+LASGW V ETEG+ CY+ SPSFKG+C+S + C+  C      DGFC++G CICTVPC
Subjt:  MAGSEGWRKLTFAVFIFLALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKACNNDMWYDGFCSNGLCICTVPC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGATCAGAAGGATGGAGAAAACTCACATTTGCGGTGTTCATCTTCCTAGCCCTTGCTTCTGGATGGACGGTGATGGAGACGGAAGGAAAGACTTGCTACAAGCA
GAGCCCGTCGTTCAAGGGACAATGTACTTCAAAGGATGCTTGTGTTAAAGCTTGCAATAACGATATGTGGTACGACGGATTTTGCTCAAATGGTTTATGCATTTGTACCG
TGCCTTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGATCAGAAGGATGGAGAAAACTCACATTTGCGGTGTTCATCTTCCTAGCCCTTGCTTCTGGATGGACGGTGATGGAGACGGAAGGAAAGACTTGCTACAAGCA
GAGCCCGTCGTTCAAGGGACAATGTACTTCAAAGGATGCTTGTGTTAAAGCTTGCAATAACGATATGTGGTACGACGGATTTTGCTCAAATGGTTTATGCATTTGTACCG
TGCCTTGCTGA
Protein sequenceShow/hide protein sequence
MAGSEGWRKLTFAVFIFLALASGWTVMETEGKTCYKQSPSFKGQCTSKDACVKACNNDMWYDGFCSNGLCICTVPC