; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10005335 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005335
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationChr07:1632048..1644066
RNA-Seq ExpressionHG10005335
SyntenyHG10005335
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589200.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]2.5e-12874.39Show/hide
Query:  LPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT
        L +  SGLLHDALH LNS+D FDS TNK ILYASLLQTCTKVASFSHG QIHAHV+KSGLE DRFVGNSLLSLYFKLGSD+ LTRRVFDGLFVKDVVSWT
Subjt:  LPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT

Query:  SMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICW
        SMIT YVREGK GNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHG+V+RHGF+SNHVIVSSLIDMYGRN+ SSDARQLFDE+ EPDAICW
Subjt:  SMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICW

Query:  TSVISAFTRNDLYEEALGFFYLMQRAY--------------------RLR--------------------------------AVEKSQRVFDRMSKRNSV
        TSVISA TRNDLYE+ALGFFYLM R Y                    RLR                                AVEKSQRVFDRMSKRNSV
Subjt:  TSVISAFTRNDLYEEALGFFYLMQRAY--------------------RLR--------------------------------AVEKSQRVFDRMSKRNSV

Query:  SWSALLGVYCQNGDFEKVVNLFREMEEM
        SWSALLGVYCQNGDFEKV+N+FR ME++
Subjt:  SWSALLGVYCQNGDFEKVVNLFREMEEM

KAG7022900.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-12874.09Show/hide
Query:  LPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT
        L +  SGLLHDA+H LNS+D FDS TNK ILYASLLQTCTKVASFSHG QIHAHV+KSGLE DRFVGNSLLSLYFKLGSD+ LTRRVFDGLFVKDVVSWT
Subjt:  LPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT

Query:  SMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICW
        SMIT YVREGK GNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHG+V+RHGF+SNHVIVSSLIDMYGRN+ SSDARQLFDE+ EPDAICW
Subjt:  SMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICW

Query:  TSVISAFTRNDLYEEALGFFYLMQRAY--------------------RLR--------------------------------AVEKSQRVFDRMSKRNSV
        TSVISA TRNDLYE+ALGFFYLM R Y                    RLR                                AVEKSQRVFDRMSKRNSV
Subjt:  TSVISAFTRNDLYEEALGFFYLMQRAY--------------------RLR--------------------------------AVEKSQRVFDRMSKRNSV

Query:  SWSALLGVYCQNGDFEKVVNLFREMEEM
        SWSALLGVYCQNGDFEKV+N+FR ME++
Subjt:  SWSALLGVYCQNGDFEKVVNLFREMEEM

XP_022147827.1 pentatricopeptide repeat-containing protein At1g03540 [Momordica charantia]2.0e-13376.22Show/hide
Query:  LPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT
        L + +SGLLHDALHILNS+DLFD+ TNKPILYASLLQTC KVASFSHG QIHAHVVKSGLETDRFVGNSLLSLYFKLGSD LLTRRVFDGLFVKDVVSWT
Subjt:  LPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT

Query:  SMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICW
        SMITGYVREGK GNAIELFWDMLDLGIEPNGFT+SAVIKACSEIGNLVLGRCFHG+V+RHGFDSNHVIVSSLIDMYGRN  S+DARQLFDELLEPDAICW
Subjt:  SMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICW

Query:  TSVISAFTRNDLYEEALGFFYLMQRAYRLR----------------------------------------------------AVEKSQRVFDRMSKRNSV
        TSVISAFTRNDLYEEALGFFY MQR YRL                                                     AV+KSQ VFDRMS+RNSV
Subjt:  TSVISAFTRNDLYEEALGFFYLMQRAYRLR----------------------------------------------------AVEKSQRVFDRMSKRNSV

Query:  SWSALLGVYCQNGDFEKVVNLFREMEEM
        SWSALLGVYCQNGDFE V+NLFREMEE+
Subjt:  SWSALLGVYCQNGDFEKVVNLFREMEEM

XP_022930613.1 pentatricopeptide repeat-containing protein At1g03540 [Cucurbita moschata]1.2e-12774.09Show/hide
Query:  LPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT
        L +  SGLL+DALH LNS+D FDS TNK ILYASLLQTCTKVASFSHG QIHAHV+KSGLE DRFVGNSLLSLYFKLGSD+ LTRRVFDGLFVKDVVSWT
Subjt:  LPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT

Query:  SMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICW
        SMIT YVREGK GNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHG+V+RHGF+SNHVIVSSLIDMYGRN+ SSDARQLFDE+ EPDAICW
Subjt:  SMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICW

Query:  TSVISAFTRNDLYEEALGFFYLMQRAY--------------------RLR--------------------------------AVEKSQRVFDRMSKRNSV
        TSVISA TRNDLYE+ALGFFYLM R Y                    RLR                                AVEKSQRVFDRMSKRNSV
Subjt:  TSVISAFTRNDLYEEALGFFYLMQRAY--------------------RLR--------------------------------AVEKSQRVFDRMSKRNSV

Query:  SWSALLGVYCQNGDFEKVVNLFREMEEM
        SWSALLGVYCQNGDFEKV+N+FR ME++
Subjt:  SWSALLGVYCQNGDFEKVVNLFREMEEM

XP_038888158.1 pentatricopeptide repeat-containing protein At1g03540 [Benincasa hispida]4.6e-13878.96Show/hide
Query:  LPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT
        L + +SGLLHDALHILNSIDLF+SITNKPI+YASLLQTCTKVASFSHGCQIHA VVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT
Subjt:  LPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT

Query:  SMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICW
        SMITGYVREGKSGNAIELFWDMLD GI+PN FTLSAVIKACSEIGNLVLG+CFHGVVIRHGFDSNHVIVSSLIDMYGRNY SSDARQLFDELLEPDAICW
Subjt:  SMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICW

Query:  TSVISAFTRNDLYEEALGFFYLMQRAYRLR----------------------------------------------------AVEKSQRVFDRMSKRNSV
        TSVISAFTRNDLYEEALGFFY MQRAYRL                                                     AVEKS+RVFDRMSKRNSV
Subjt:  TSVISAFTRNDLYEEALGFFYLMQRAYRLR----------------------------------------------------AVEKSQRVFDRMSKRNSV

Query:  SWSALLGVYCQNGDFEKVVNLFREMEEM
        SWSALLGVYCQNGDFEKVVNLFREM+E+
Subjt:  SWSALLGVYCQNGDFEKVVNLFREMEEM

TrEMBL top hitse value%identityAlignment
A0A1S3C0U7 pentatricopeptide repeat-containing protein At1g035405.6e-12672.56Show/hide
Query:  LPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT
        L + KSGLL+DALHILNS+DL+DS  NKP+LYASLLQTCTKV SFS GCQ HAHVVKSGLETDRFVGNSLLSLYFKLGS+ LLTRRVFDGLFVKDVVSW 
Subjt:  LPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT

Query:  SMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICW
        SMITGYVREGKSG AIELFWDMLD GIEPN FTLS VIKACSEIGNLVLG+CFHGVV+R GFDSN VI+SSLIDMYGRNY SS+ARQLFDELLEPD +CW
Subjt:  SMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICW

Query:  TSVISAFTRNDLYEEALGFFYLMQRAYRLR----------------------------------------------------AVEKSQRVFDRMSKRNSV
        T+VISAFTRND YEEALGFFYLM RAYRL                                                     AVEKSQRVFDRMS RNSV
Subjt:  TSVISAFTRNDLYEEALGFFYLMQRAYRLR----------------------------------------------------AVEKSQRVFDRMSKRNSV

Query:  SWSALLGVYCQNGDFEKVVNLFREMEEM
        SWSALL VYCQNGDFEKVV+LFREM+++
Subjt:  SWSALLGVYCQNGDFEKVVNLFREMEEM

A0A5A7SR37 Pentatricopeptide repeat-containing protein5.6e-12672.56Show/hide
Query:  LPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT
        L + KSGLL+DALHILNS+DL+DS  NKP+LYASLLQTCTKV SFS GCQ HAHVVKSGLETDRFVGNSLLSLYFKLGS+ LLTRRVFDGLFVKDVVSW 
Subjt:  LPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT

Query:  SMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICW
        SMITGYVREGKSG AIELFWDMLD GIEPN FTLS VIKACSEIGNLVLG+CFHGVV+R GFDSN VI+SSLIDMYGRNY SS+ARQLFDELLEPD +CW
Subjt:  SMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICW

Query:  TSVISAFTRNDLYEEALGFFYLMQRAYRLR----------------------------------------------------AVEKSQRVFDRMSKRNSV
        T+VISAFTRND YEEALGFFYLM RAYRL                                                     AVEKSQRVFDRMS RNSV
Subjt:  TSVISAFTRNDLYEEALGFFYLMQRAYRLR----------------------------------------------------AVEKSQRVFDRMSKRNSV

Query:  SWSALLGVYCQNGDFEKVVNLFREMEEM
        SWSALL VYCQNGDFEKVV+LFREM+++
Subjt:  SWSALLGVYCQNGDFEKVVNLFREMEEM

A0A6J1D3F1 pentatricopeptide repeat-containing protein At1g035409.6e-13476.22Show/hide
Query:  LPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT
        L + +SGLLHDALHILNS+DLFD+ TNKPILYASLLQTC KVASFSHG QIHAHVVKSGLETDRFVGNSLLSLYFKLGSD LLTRRVFDGLFVKDVVSWT
Subjt:  LPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT

Query:  SMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICW
        SMITGYVREGK GNAIELFWDMLDLGIEPNGFT+SAVIKACSEIGNLVLGRCFHG+V+RHGFDSNHVIVSSLIDMYGRN  S+DARQLFDELLEPDAICW
Subjt:  SMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICW

Query:  TSVISAFTRNDLYEEALGFFYLMQRAYRLR----------------------------------------------------AVEKSQRVFDRMSKRNSV
        TSVISAFTRNDLYEEALGFFY MQR YRL                                                     AV+KSQ VFDRMS+RNSV
Subjt:  TSVISAFTRNDLYEEALGFFYLMQRAYRLR----------------------------------------------------AVEKSQRVFDRMSKRNSV

Query:  SWSALLGVYCQNGDFEKVVNLFREMEEM
        SWSALLGVYCQNGDFE V+NLFREMEE+
Subjt:  SWSALLGVYCQNGDFEKVVNLFREMEEM

A0A6J1EVR7 pentatricopeptide repeat-containing protein At1g035406.0e-12874.09Show/hide
Query:  LPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT
        L +  SGLL+DALH LNS+D FDS TNK ILYASLLQTCTKVASFSHG QIHAHV+KSGLE DRFVGNSLLSLYFKLGSD+ LTRRVFDGLFVKDVVSWT
Subjt:  LPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT

Query:  SMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICW
        SMIT YVREGK GNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHG+V+RHGF+SNHVIVSSLIDMYGRN+ SSDARQLFDE+ EPDAICW
Subjt:  SMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICW

Query:  TSVISAFTRNDLYEEALGFFYLMQRAY--------------------RLR--------------------------------AVEKSQRVFDRMSKRNSV
        TSVISA TRNDLYE+ALGFFYLM R Y                    RLR                                AVEKSQRVFDRMSKRNSV
Subjt:  TSVISAFTRNDLYEEALGFFYLMQRAY--------------------RLR--------------------------------AVEKSQRVFDRMSKRNSV

Query:  SWSALLGVYCQNGDFEKVVNLFREMEEM
        SWSALLGVYCQNGDFEKV+N+FR ME++
Subjt:  SWSALLGVYCQNGDFEKVVNLFREMEEM

A0A6J1JMC8 pentatricopeptide repeat-containing protein At1g035405.1e-12773.17Show/hide
Query:  LPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT
        L +  SGLLHDALH LNS+D F+S TNK ILYASLLQTCTKVASFSHG QIHAHV+KSGLETDRFVGNSLLSLYFKLGSD  LTRRVFDGLFVKDVVSWT
Subjt:  LPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWT

Query:  SMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICW
        SMIT YVREGK GNAIE FWDMLDLGIEPNGFTLSAVIKACSEIGNL+LGRCFHG+V+RHGF+SNHVIVSSLIDMYGRN+ SSDARQLFDE+ EPDAICW
Subjt:  SMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICW

Query:  TSVISAFTRNDLYEEALGFFYLMQRAY--------------------RLR--------------------------------AVEKSQRVFDRMSKRNSV
        TSVISA TRNDLYE+ALGFFYLM R Y                    RLR                                A+EKSQ VFDRMSKRNSV
Subjt:  TSVISAFTRNDLYEEALGFFYLMQRAY--------------------RLR--------------------------------AVEKSQRVFDRMSKRNSV

Query:  SWSALLGVYCQNGDFEKVVNLFREMEEM
        SWSALLGVYCQNGDFEKV+N+FR ME++
Subjt:  SWSALLGVYCQNGDFEKVVNLFREMEEM

SwissProt top hitse value%identityAlignment
Q8GZA8 Protein ULTRAPETALA 17.2e-6264.71Show/hide
Query:  GFVLFSSEELSEMSGVKFGGDFVEVTCGCTSHRYGDSVGRLRIFV---------------NDKLTPAAFEKHSGRETARKWKNNVWVIVDGDKVPLYKTV
        G +LF  EEL EMSGV  GGD+VEV CGCTSHRYGD+V RLR+F                 DKLTPAAFEKHSGRETARKWKNNVWVI+ G+KVPL KTV
Subjt:  GFVLFSSEELSEMSGVKFGGDFVEVTCGCTSHRYGDSVGRLRIFV---------------NDKLTPAAFEKHSGRETARKWKNNVWVIVDGDKVPLYKTV

Query:  LLKYYNQALKSSNGSSRSQNGRACHRDEFVRCSSCNKERRFRLRTKEECRIHHDALADSNWTCADLPYDK
        LLKYYN++ K  + S+RSQ  + CHRDEFV C+ C KERRFRLR+++ECR+HH+A+ D NW C+D PYDK
Subjt:  LLKYYNQALKSSNGSSRSQNGRACHRDEFVRCSSCNKERRFRLRTKEECRIHHDALADSNWTCADLPYDK

Q8S8I2 Protein ULTRAPETALA 24.5e-5662.87Show/hide
Query:  LFSSEELSEMSGVKFGGDFVEVTCGCTSHRYGDSVGRLRIF---------------VNDKLTPAAFEKHSGRETARKWKNNVWVIVDGDKVPLYKTVLLK
        LFS EEL E+SGV  G D+VEV CGCTSHRYGD+V RL+IF               + DKLTPAAFEKHS RET+R W+NNVWV ++GDKVPL KTVLL+
Subjt:  LFSSEELSEMSGVKFGGDFVEVTCGCTSHRYGDSVGRLRIF---------------VNDKLTPAAFEKHSGRETARKWKNNVWVIVDGDKVPLYKTVLLK

Query:  YYNQALKSSNGSSRSQNGRACHRDEFVRCSSCNKERRFRLRTKEECRIHHDALADSNWTCADLPYDK
        YYN+ALK+SN S      +  HRDEFV CS+C KERRFRLR++ ECR+HHDA+A+ NW C D PYDK
Subjt:  YYNQALKSSNGSSRSQNGRACHRDEFVRCSSCNKERRFRLRTKEECRIHHDALADSNWTCADLPYDK

Q9LIQ7 Pentatricopeptide repeat-containing protein At3g24000, mitochondrial9.2e-3331.42Show/hide
Query:  YASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLDLGIEPNG
        Y +LL+ CT       G  +HAH+++S    D  +GN+LL++Y K GS L   R+VF+ +  +D V+WT++I+GY +  +  +A+  F  ML  G  PN 
Subjt:  YASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLDLGIEPNG

Query:  FTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYLMQR------
        FTLS+VIKA +       G   HG  ++ GFDSN  + S+L+D+Y R     DA+ +FD L   + + W ++I+   R    E+AL  F  M R      
Subjt:  FTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYLMQR------

Query:  ------------------------AYRLRAVEK---------------------SQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVVNLFREMEEM
                                AY +++ EK                     ++++FDR++KR+ VSW++LL  Y Q+G  ++ V  F EM  +
Subjt:  ------------------------AYRLRAVEK---------------------SQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVVNLFREMEEM

Q9LR69 Pentatricopeptide repeat-containing protein At1g035408.8e-8452.01Show/hide
Query:  KSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMIT
        K G L +A+ ILNS      I   P LYASLLQTC KV SF HG Q HAHVVKSGLETDR VGNSLLSLYFKLG  +  TRRVFDG FVKD +SWTSM++
Subjt:  KSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMIT

Query:  GYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICWTSVI
        GYV   +   A+E+F +M+  G++ N FTLS+ +KACSE+G + LGRCFHGVVI HGF+ NH I S+L  +YG N    DAR++FDE+ EPD ICWT+V+
Subjt:  GYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICWTSVI

Query:  SAFTRNDLYEEALGFFYLMQRAYRL----------------------------------------------------RAVEKSQRVFDRMSKRNSVSWSA
        SAF++NDLYEEALG FY M R   L                                                     +V ++++VF+ MSK+NSVSWSA
Subjt:  SAFTRNDLYEEALGFFYLMQRAYRL----------------------------------------------------RAVEKSQRVFDRMSKRNSVSWSA

Query:  LLGVYCQNGDFEKVVNLFREMEE
        LLG YCQNG+ EK + +FREMEE
Subjt:  LLGVYCQNGDFEKVVNLFREMEE

Q9ZQ74 Pentatricopeptide repeat-containing protein At2g03380, mitochondrial2.6e-3528.74Show/hide
Query:  WTCADLPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKD
        WT     Y K+ L  + L + N +   +++      Y +L+  CTK+++   G   H  +VKSG+E    +  SLL +Y K G D+   RRVF+     D
Subjt:  WTCADLPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKD

Query:  VVSWTSMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHG-FDSNHVIVSSLIDMYGRNYCSSDARQLFDELLE
        +V WT+MI GY   G    A+ LF  M  + I+PN  T+++V+  C  I NL LGR  HG+ I+ G +D+N  + ++L+ MY + Y + DA+ +F+   E
Subjt:  VVSWTSMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHG-FDSNHVIVSSLIDMYGRNYCSSDARQLFDELLE

Query:  PDAICWTSVISAFTRNDLYEEALGFFYLMQ------------------------------RAYRLRA-----------------------VEKSQRVFDR
         D + W S+IS F++N    EAL  F+ M                                AY ++                         + ++ +FD 
Subjt:  PDAICWTSVISAFTRNDLYEEALGFFYLMQ------------------------------RAYRLRA-----------------------VEKSQRVFDR

Query:  MSKRNSVSWSALLGVYCQNGDFEKVVNLFREMEEMKNNSHE
        + ++N+++WSA++G Y + GD    + LF EM + +   +E
Subjt:  MSKRNSVSWSALLGVYCQNGDFEKVVNLFREMEEMKNNSHE

Arabidopsis top hitse value%identityAlignment
AT1G03540.1 Pentatricopeptide repeat (PPR-like) superfamily protein6.2e-8552.01Show/hide
Query:  KSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMIT
        K G L +A+ ILNS      I   P LYASLLQTC KV SF HG Q HAHVVKSGLETDR VGNSLLSLYFKLG  +  TRRVFDG FVKD +SWTSM++
Subjt:  KSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMIT

Query:  GYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICWTSVI
        GYV   +   A+E+F +M+  G++ N FTLS+ +KACSE+G + LGRCFHGVVI HGF+ NH I S+L  +YG N    DAR++FDE+ EPD ICWT+V+
Subjt:  GYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSLIDMYGRNYCSSDARQLFDELLEPDAICWTSVI

Query:  SAFTRNDLYEEALGFFYLMQRAYRL----------------------------------------------------RAVEKSQRVFDRMSKRNSVSWSA
        SAF++NDLYEEALG FY M R   L                                                     +V ++++VF+ MSK+NSVSWSA
Subjt:  SAFTRNDLYEEALGFFYLMQRAYRL----------------------------------------------------RAVEKSQRVFDRMSKRNSVSWSA

Query:  LLGVYCQNGDFEKVVNLFREMEE
        LLG YCQNG+ EK + +FREMEE
Subjt:  LLGVYCQNGDFEKVVNLFREMEE

AT2G03380.1 Pentatricopeptide repeat (PPR) superfamily protein1.8e-3628.74Show/hide
Query:  WTCADLPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKD
        WT     Y K+ L  + L + N +   +++      Y +L+  CTK+++   G   H  +VKSG+E    +  SLL +Y K G D+   RRVF+     D
Subjt:  WTCADLPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLETDRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKD

Query:  VVSWTSMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHG-FDSNHVIVSSLIDMYGRNYCSSDARQLFDELLE
        +V WT+MI GY   G    A+ LF  M  + I+PN  T+++V+  C  I NL LGR  HG+ I+ G +D+N  + ++L+ MY + Y + DA+ +F+   E
Subjt:  VVSWTSMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHG-FDSNHVIVSSLIDMYGRNYCSSDARQLFDELLE

Query:  PDAICWTSVISAFTRNDLYEEALGFFYLMQ------------------------------RAYRLRA-----------------------VEKSQRVFDR
         D + W S+IS F++N    EAL  F+ M                                AY ++                         + ++ +FD 
Subjt:  PDAICWTSVISAFTRNDLYEEALGFFYLMQ------------------------------RAYRLRA-----------------------VEKSQRVFDR

Query:  MSKRNSVSWSALLGVYCQNGDFEKVVNLFREMEEMKNNSHE
        + ++N+++WSA++G Y + GD    + LF EM + +   +E
Subjt:  MSKRNSVSWSALLGVYCQNGDFEKVVNLFREMEEMKNNSHE

AT2G20825.1 Developmental regulator, ULTRAPETALA3.2e-5762.87Show/hide
Query:  LFSSEELSEMSGVKFGGDFVEVTCGCTSHRYGDSVGRLRIF---------------VNDKLTPAAFEKHSGRETARKWKNNVWVIVDGDKVPLYKTVLLK
        LFS EEL E+SGV  G D+VEV CGCTSHRYGD+V RL+IF               + DKLTPAAFEKHS RET+R W+NNVWV ++GDKVPL KTVLL+
Subjt:  LFSSEELSEMSGVKFGGDFVEVTCGCTSHRYGDSVGRLRIF---------------VNDKLTPAAFEKHSGRETARKWKNNVWVIVDGDKVPLYKTVLLK

Query:  YYNQALKSSNGSSRSQNGRACHRDEFVRCSSCNKERRFRLRTKEECRIHHDALADSNWTCADLPYDK
        YYN+ALK+SN S      +  HRDEFV CS+C KERRFRLR++ ECR+HHDA+A+ NW C D PYDK
Subjt:  YYNQALKSSNGSSRSQNGRACHRDEFVRCSSCNKERRFRLRTKEECRIHHDALADSNWTCADLPYDK

AT4G28190.1 Developmental regulator, ULTRAPETALA5.1e-6364.71Show/hide
Query:  GFVLFSSEELSEMSGVKFGGDFVEVTCGCTSHRYGDSVGRLRIFV---------------NDKLTPAAFEKHSGRETARKWKNNVWVIVDGDKVPLYKTV
        G +LF  EEL EMSGV  GGD+VEV CGCTSHRYGD+V RLR+F                 DKLTPAAFEKHSGRETARKWKNNVWVI+ G+KVPL KTV
Subjt:  GFVLFSSEELSEMSGVKFGGDFVEVTCGCTSHRYGDSVGRLRIFV---------------NDKLTPAAFEKHSGRETARKWKNNVWVIVDGDKVPLYKTV

Query:  LLKYYNQALKSSNGSSRSQNGRACHRDEFVRCSSCNKERRFRLRTKEECRIHHDALADSNWTCADLPYDK
        LLKYYN++ K  + S+RSQ  + CHRDEFV C+ C KERRFRLR+++ECR+HH+A+ D NW C+D PYDK
Subjt:  LLKYYNQALKSSNGSSRSQNGRACHRDEFVRCSSCNKERRFRLRTKEECRIHHDALADSNWTCADLPYDK

AT4G28190.2 Developmental regulator, ULTRAPETALA2.0e-5954.73Show/hide
Query:  GFVLFSSEELSEMSGVKFGGDFVEVTCGCTSHRYGDSVGRLRIF----------------------------------------------VNDKLTPAAF
        G +LF  EEL EMSGV  GGD+VEV CGCTSHRYGD+V RLR+F                                              + DKLTPAAF
Subjt:  GFVLFSSEELSEMSGVKFGGDFVEVTCGCTSHRYGDSVGRLRIF----------------------------------------------VNDKLTPAAF

Query:  EKHSGRETARKWKNNVWVIVDGDKVPLYKTVLLKYYNQALKSSNGSSRSQNGRACHRDEFVRCSSCNKERRFRLRTKEECRIHHDALADSNWTCADLPYD
        EKHSGRETARKWKNNVWVI+ G+KVPL KTVLLKYYN++ K  + S+RSQ  + CHRDEFV C+ C KERRFRLR+++ECR+HH+A+ D NW C+D PYD
Subjt:  EKHSGRETARKWKNNVWVIVDGDKVPLYKTVLLKYYNQALKSSNGSSRSQNGRACHRDEFVRCSSCNKERRFRLRTKEECRIHHDALADSNWTCADLPYD

Query:  K
        K
Subjt:  K


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGTGGGGTTGATGAAAATGGGTTCGTCTTGTTTTCTAGTGAGGAGTTGAGTGAAATGAGTGGGGTTAAGTTCGGTGGAGACTTTGTGGAAGTCACTTGTGGCTG
TACTAGTCATCGATATGGCGATTCTGTTGGGAGGTTGAGGATTTTTGTTAATGACAAGTTGACTCCTGCTGCATTTGAGAAGCACTCCGGAAGAGAAACGGCTAGAAAAT
GGAAGAACAATGTTTGGGTCATAGTTGATGGAGATAAGGTTCCACTATACAAGACTGTTCTCCTCAAGTACTACAATCAGGCGCTAAAAAGCAGCAATGGATCCAGTAGA
TCCCAAAACGGACGAGCCTGTCACCGTGATGAGTTTGTTCGATGTAGTAGTTGCAACAAGGAACGCAGATTTCGACTTAGGACAAAAGAGGAATGCCGAATACACCACGA
TGCTTTGGCAGATAGTAATTGGACTTGTGCTGATCTACCATATGACAAGTCCGGCCTACTCCACGATGCGCTACACATCCTAAACTCCATTGATTTGTTCGATTCCATCA
CCAATAAACCAATTCTCTACGCTTCTCTCTTACAAACCTGCACCAAGGTAGCTTCCTTCAGCCATGGCTGTCAAATTCATGCCCATGTTGTTAAATCTGGCCTCGAGACT
GACCGCTTTGTTGGGAATAGCTTACTTTCTCTTTACTTTAAATTGGGTTCAGATCTTCTGCTGACTCGAAGAGTATTTGATGGTCTTTTTGTCAAGGATGTAGTGTCTTG
GACATCCATGATTACGGGTTATGTTCGAGAAGGTAAATCTGGAAATGCGATTGAATTGTTTTGGGATATGTTGGATTTGGGGATAGAGCCGAATGGTTTTACTTTATCTG
CTGTGATCAAGGCGTGCTCGGAGATTGGGAATTTGGTACTTGGTAGATGCTTTCATGGGGTTGTAATAAGGCATGGATTTGATTCAAATCATGTAATTGTGAGTTCTTTG
ATTGACATGTACGGGAGAAACTATTGTTCAAGTGATGCACGCCAACTGTTTGATGAATTGCTTGAACCAGATGCAATATGTTGGACATCGGTCATTTCAGCGTTTACAAG
GAATGATTTGTATGAGGAAGCATTGGGATTCTTTTATTTGATGCAAAGAGCTTATAGGTTGCGAGCAGTTGAGAAGTCTCAACGTGTTTTCGATAGGATGTCGAAGAGGA
ATTCGGTTTCATGGTCTGCTTTGCTTGGAGTTTATTGCCAAAATGGTGACTTCGAAAAGGTTGTAAATCTTTTTAGGGAAATGGAGGAGATGAAGAACAACAGCCATGAG
AAGCCACTGAACGTATCAATGATCTACCAACCTGATCGAAAAGGTTATTTAGAGAGAGTTCGTGAATTTTCCATGGAGATATTCAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAGTGGGGTTGATGAAAATGGGTTCGTCTTGTTTTCTAGTGAGGAGTTGAGTGAAATGAGTGGGGTTAAGTTCGGTGGAGACTTTGTGGAAGTCACTTGTGGCTG
TACTAGTCATCGATATGGCGATTCTGTTGGGAGGTTGAGGATTTTTGTTAATGACAAGTTGACTCCTGCTGCATTTGAGAAGCACTCCGGAAGAGAAACGGCTAGAAAAT
GGAAGAACAATGTTTGGGTCATAGTTGATGGAGATAAGGTTCCACTATACAAGACTGTTCTCCTCAAGTACTACAATCAGGCGCTAAAAAGCAGCAATGGATCCAGTAGA
TCCCAAAACGGACGAGCCTGTCACCGTGATGAGTTTGTTCGATGTAGTAGTTGCAACAAGGAACGCAGATTTCGACTTAGGACAAAAGAGGAATGCCGAATACACCACGA
TGCTTTGGCAGATAGTAATTGGACTTGTGCTGATCTACCATATGACAAGTCCGGCCTACTCCACGATGCGCTACACATCCTAAACTCCATTGATTTGTTCGATTCCATCA
CCAATAAACCAATTCTCTACGCTTCTCTCTTACAAACCTGCACCAAGGTAGCTTCCTTCAGCCATGGCTGTCAAATTCATGCCCATGTTGTTAAATCTGGCCTCGAGACT
GACCGCTTTGTTGGGAATAGCTTACTTTCTCTTTACTTTAAATTGGGTTCAGATCTTCTGCTGACTCGAAGAGTATTTGATGGTCTTTTTGTCAAGGATGTAGTGTCTTG
GACATCCATGATTACGGGTTATGTTCGAGAAGGTAAATCTGGAAATGCGATTGAATTGTTTTGGGATATGTTGGATTTGGGGATAGAGCCGAATGGTTTTACTTTATCTG
CTGTGATCAAGGCGTGCTCGGAGATTGGGAATTTGGTACTTGGTAGATGCTTTCATGGGGTTGTAATAAGGCATGGATTTGATTCAAATCATGTAATTGTGAGTTCTTTG
ATTGACATGTACGGGAGAAACTATTGTTCAAGTGATGCACGCCAACTGTTTGATGAATTGCTTGAACCAGATGCAATATGTTGGACATCGGTCATTTCAGCGTTTACAAG
GAATGATTTGTATGAGGAAGCATTGGGATTCTTTTATTTGATGCAAAGAGCTTATAGGTTGCGAGCAGTTGAGAAGTCTCAACGTGTTTTCGATAGGATGTCGAAGAGGA
ATTCGGTTTCATGGTCTGCTTTGCTTGGAGTTTATTGCCAAAATGGTGACTTCGAAAAGGTTGTAAATCTTTTTAGGGAAATGGAGGAGATGAAGAACAACAGCCATGAG
AAGCCACTGAACGTATCAATGATCTACCAACCTGATCGAAAAGGTTATTTAGAGAGAGTTCGTGAATTTTCCATGGAGATATTCAGTTAA
Protein sequenceShow/hide protein sequence
MASGVDENGFVLFSSEELSEMSGVKFGGDFVEVTCGCTSHRYGDSVGRLRIFVNDKLTPAAFEKHSGRETARKWKNNVWVIVDGDKVPLYKTVLLKYYNQALKSSNGSSR
SQNGRACHRDEFVRCSSCNKERRFRLRTKEECRIHHDALADSNWTCADLPYDKSGLLHDALHILNSIDLFDSITNKPILYASLLQTCTKVASFSHGCQIHAHVVKSGLET
DRFVGNSLLSLYFKLGSDLLLTRRVFDGLFVKDVVSWTSMITGYVREGKSGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGVVIRHGFDSNHVIVSSL
IDMYGRNYCSSDARQLFDELLEPDAICWTSVISAFTRNDLYEEALGFFYLMQRAYRLRAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVVNLFREMEEMKNNSHE
KPLNVSMIYQPDRKGYLERVREFSMEIFS