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HG10005362 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005362
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionActin cytoskeleton-regulatory complex protein
Genome locationChr07:1831840..1832145
RNA-Seq ExpressionHG10005362
SyntenyHG10005362
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031619.1 hypothetical protein E6C27_scaffold139G003870 [Cucumis melo var. makuwa]8.3e-3788.24Show/hide
Query:  MAKICLI-CLIVAEILLIQAMASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDS
        MAK CL+ CLIVAEILLIQAM SIATTTDLPLSAAPEP+E GT EG   AEAPEIRR+GKHHGD SVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDS
Subjt:  MAKICLI-CLIVAEILLIQAMASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDS

Query:  VH
        VH
Subjt:  VH

KAE8645753.1 hypothetical protein Csa_020263 [Cucumis sativus]5.6e-2579.12Show/hide
Query:  MAKICLI-CLIVAEILLIQAM-ASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIR
        MAKICL+ CLIV EI LIQA+  SIATTT+LPLS APE SE GT EG   AEAPEIRR+GKHHGD S+AGGGVIIGGLVTA+FAAVFCYIR
Subjt:  MAKICLI-CLIVAEILLIQAM-ASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIR

KAG6572323.1 hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sororia]7.3e-3382.18Show/hide
Query:  MAKICLICLIVAEILLIQAMASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSV
        MAKI L+CLI+A+ILLIQAMAS ATTT   +SAAPEPSET   EG G AEAPEIRR+GKHH D SVAGGGVIIGGLVTA+FAAVFCYIRVTRKRDGVDSV
Subjt:  MAKICLICLIVAEILLIQAMASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSV

Query:  H
        H
Subjt:  H

KAG7011935.1 hypothetical protein SDJN02_26843, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-3181.19Show/hide
Query:  MAKICLICLIVAEILLIQAMASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSV
        MAKI L+ LI+A+ILLIQAMAS ATTT   +SAAPEPSET   EG G AEAPEIRR+GKHH D SVAGGGVIIGGLVTA+FAAVFCYIRVTRKRDGVDSV
Subjt:  MAKICLICLIVAEILLIQAMASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSV

Query:  H
        H
Subjt:  H

KDO36691.1 hypothetical protein CISIN_1g038247mg [Citrus sinensis]4.7e-1654.39Show/hide
Query:  MAKICLICL-IVAEILLIQAMASIATTTDL------PLSAAPEPSETGTGEGY-----GGAEAPEIRRMGK---HHGDNSVAGGGVIIGGLVTAIFAAVF
        MA++ L+ L IVAEIL++QA+A  +    +      P   A +P+ + +   Y       AEAPEIRR+GK   HH D SVAGGGVIIGGLVTAIFAAVF
Subjt:  MAKICLICL-IVAEILLIQAMASIATTTDL------PLSAAPEPSETGTGEGY-----GGAEAPEIRRMGK---HHGDNSVAGGGVIIGGLVTAIFAAVF

Query:  CYIRVTRKRDGVDS
        CYIRVTRKR G D+
Subjt:  CYIRVTRKRDGVDS

TrEMBL top hitse value%identityAlignment
A0A067DDL6 Uncharacterized protein2.3e-1654.39Show/hide
Query:  MAKICLICL-IVAEILLIQAMASIATTTDL------PLSAAPEPSETGTGEGY-----GGAEAPEIRRMGK---HHGDNSVAGGGVIIGGLVTAIFAAVF
        MA++ L+ L IVAEIL++QA+A  +    +      P   A +P+ + +   Y       AEAPEIRR+GK   HH D SVAGGGVIIGGLVTAIFAAVF
Subjt:  MAKICLICL-IVAEILLIQAMASIATTTDL------PLSAAPEPSETGTGEGY-----GGAEAPEIRRMGK---HHGDNSVAGGGVIIGGLVTAIFAAVF

Query:  CYIRVTRKRDGVDS
        CYIRVTRKR G D+
Subjt:  CYIRVTRKRDGVDS

A0A067E958 Uncharacterized protein3.0e-1654.39Show/hide
Query:  MAKICLICL-IVAEILLIQAMASIATTTDL------PLSAAPEPSETGTGEGY-----GGAEAPEIRRMGK---HHGDNSVAGGGVIIGGLVTAIFAAVF
        MA++ L+ L IVAEIL++QA+A  +    +      P   A +P+ + +   Y       AEAPEIRR+GK   HH D SVAGGGVIIGGLVTAIFAAVF
Subjt:  MAKICLICL-IVAEILLIQAMASIATTTDL------PLSAAPEPSETGTGEGY-----GGAEAPEIRRMGK---HHGDNSVAGGGVIIGGLVTAIFAAVF

Query:  CYIRVTRKRDGVDS
        CYIRVTRKR+G D+
Subjt:  CYIRVTRKRDGVDS

A0A0A0K3N0 Uncharacterized protein7.8e-3381.55Show/hide
Query:  MAKICLI-CLIVAEILLIQAM-ASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVD
        MAKICL+ CLIV EI LIQA+  SIATTT+LPLS APE SE GT EG   AEAPEIRR+GKHHGD S+AGGGVIIGGLVTA+FAAVFCYIRVTRKRDGVD
Subjt:  MAKICLI-CLIVAEILLIQAM-ASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVD

Query:  SVH
        SVH
Subjt:  SVH

A0A2N9IXN3 Uncharacterized protein4.6e-1752.5Show/hide
Query:  MAKICLICLIVAEILLIQAMAS-----------------------IATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLV
        M ++ L CLI+AEIL++QAMA                        +A   D P+S+  E  E  + E    AEAP IRRMGKHH D S+AGGGVIIGGL 
Subjt:  MAKICLICLIVAEILLIQAMAS-----------------------IATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLV

Query:  TAIFAAVFCYIRVTRKRDGV
        TAIFA VFCYIRVTRKRDGV
Subjt:  TAIFAAVFCYIRVTRKRDGV

A0A5D3C590 Uncharacterized protein4.0e-3788.24Show/hide
Query:  MAKICLI-CLIVAEILLIQAMASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDS
        MAK CL+ CLIVAEILLIQAM SIATTTDLPLSAAPEP+E GT EG   AEAPEIRR+GKHHGD SVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDS
Subjt:  MAKICLI-CLIVAEILLIQAMASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDS

Query:  VH
        VH
Subjt:  VH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein3.6e-0639.6Show/hide
Query:  AKICLICLIVAEILLIQAMASIATTTDLPLSAAPEPSETGTGEGYG-GAEAPEIR------RMGKHHG--DNSVAGGGVIIGGLVTAIFAAVFCYIRVTR
        AK  ++C ++  +  + A +S A          P   + G  E  G  AEAPE+       R G HH   + SVAGGGVI+GGL T     VFCYIR TR
Subjt:  AKICLICLIVAEILLIQAMASIATTTDLPLSAAPEPSETGTGEGYG-GAEAPEIR------RMGKHHG--DNSVAGGGVIIGGLVTAIFAAVFCYIRVTR

Query:  K
        K
Subjt:  K


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAAATTTGCCTTATTTGCCTCATTGTGGCCGAGATCTTGCTGATTCAAGCAATGGCATCGATTGCCACAACAACAGATCTCCCGCTGTCGGCGGCGCCGGAGCC
ATCGGAGACCGGGACTGGAGAAGGGTATGGAGGGGCGGAGGCGCCGGAGATCCGGCGGATGGGAAAGCATCACGGCGATAACTCGGTGGCCGGCGGGGGAGTCATCATCG
GCGGCCTCGTAACGGCAATTTTTGCAGCTGTTTTTTGTTACATTCGGGTTACTAGGAAAAGAGATGGGGTTGATTCGGTTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAAATTTGCCTTATTTGCCTCATTGTGGCCGAGATCTTGCTGATTCAAGCAATGGCATCGATTGCCACAACAACAGATCTCCCGCTGTCGGCGGCGCCGGAGCC
ATCGGAGACCGGGACTGGAGAAGGGTATGGAGGGGCGGAGGCGCCGGAGATCCGGCGGATGGGAAAGCATCACGGCGATAACTCGGTGGCCGGCGGGGGAGTCATCATCG
GCGGCCTCGTAACGGCAATTTTTGCAGCTGTTTTTTGTTACATTCGGGTTACTAGGAAAAGAGATGGGGTTGATTCGGTTCATTGA
Protein sequenceShow/hide protein sequence
MAKICLICLIVAEILLIQAMASIATTTDLPLSAAPEPSETGTGEGYGGAEAPEIRRMGKHHGDNSVAGGGVIIGGLVTAIFAAVFCYIRVTRKRDGVDSVH