; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10005410 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005410
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat-containing family protein
Genome locationChr07:2323212..2324024
RNA-Seq ExpressionHG10005410
SyntenyHG10005410
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040231.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.7e-13591.85Show/hide
Query:  MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEA
        MMMMSGSVKPNEATYVSVLSSCANLDA+GVLCRGKEVHAYIIRNEGE SVFIGTALIDFYGKMGLLG AR +FNQMK REVC WNAMISSFASNSRETEA
Subjt:  MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEA

Query:  LDLFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGAT
        LDLFA MKVEGIHPNEVTFV ILTACARGKLV+LGLQLF+SM  DFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPF+PDASVLGALLSACKIHGA 
Subjt:  LDLFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGAT

Query:  ELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNLVLESSS
        ELGNEVGRRLLV+QPRHCGRYVTLAS+NAGAEKWNRAAVIR VMA ARIQK PAYSRVDPMQNLVL S S
Subjt:  ELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNLVLESSS

KAG6589154.1 putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]2.8e-13288.89Show/hide
Query:  MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEA
        MMMM+G VKPNEATYVSVLSSCANL A+GVLCRGKE+HAYIIRNEGELSVFIGTAL+DFYGKMGLLGSAR +FNQMKNRE+CAWNAMISS +SN RE EA
Subjt:  MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEA

Query:  LDLFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGAT
        L+LFA+MKVEGI PNEVTFV ILTACARGKLVE GL+LFRSMSNDFSIVPI EHYVC+VDLLGKAGLLREATEFIESMPF+PDASVLGALL+AC IHGAT
Subjt:  LDLFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGAT

Query:  ELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNLVLESSS
        ELGNEVGRRLLV+QPRHCGRYVTLASINAGAEKW+ AAVIRRVMA ARIQKAPAYSRVDPMQNLV  SSS
Subjt:  ELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNLVLESSS

XP_004144596.1 putative pentatricopeptide repeat-containing protein At1g10330 [Cucumis sativus]1.5e-13390.74Show/hide
Query:  MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEA
        +MMMSGSVKPNEATYVSVLSS ANLDA+GVLCRGKEVHAYIIRNEGE SVFIGT LIDFYGKMGLLG AR +FNQMK REVC WNAMISSFASN RETEA
Subjt:  MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEA

Query:  LDLFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGAT
        LDLFA MKVEGIHPNEVTFV ILTACARGKLV+LGLQLF+SM  DFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPF+PDASVLGALLSACKIHGAT
Subjt:  LDLFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGAT

Query:  ELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNLVLESSS
        ELGNEVGRRLL +QPRHCGRYVTLAS+NAGAEKWNRAAVIRRVMA ARIQK PAYSRVDPMQNLVL S S
Subjt:  ELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNLVLESSS

XP_008455452.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g10330 [Cucumis melo]1.4e-13491.48Show/hide
Query:  MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEA
        MMMMSGSVKPNEATYVSVLSSCANLDA+GVLCRGKEVHAYIIRNEGE SVFIGTALIDFYGKMGLLG AR +FNQMK REVC WNAMISSFASNSRETEA
Subjt:  MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEA

Query:  LDLFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGAT
        LDLFA MKVEGIHPNEVTFV ILTACARGKLV+LGLQLF+SM  DFSIVPITEHYVCVVDLLGKAGLLREATE IESMPF+PDASVLGALLSACKIHGA 
Subjt:  LDLFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGAT

Query:  ELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNLVLESSS
        ELGNEVGRRLLV+QPRHCGRYVTLAS+NAGAEKWNRAAVIR VMA ARIQK PAYSRVDPMQNLVL S S
Subjt:  ELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNLVLESSS

XP_038887445.1 putative pentatricopeptide repeat-containing protein At1g10330 [Benincasa hispida]3.8e-13793.94Show/hide
Query:  MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEA
        MMM +GSVKPNEATYVSVLSSCANLDA+GVLCRGKEVHAYIIR EGELSVFIGTALIDFYGKMGLLGSARI+FNQMKNREVC WNAMISSFASN+RETEA
Subjt:  MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEA

Query:  LDLFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGAT
        LDLFA MKVEGIHPNEVTFV ILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLL+EA +F+ESMPFEPDASVLGALLSACKIHGAT
Subjt:  LDLFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGAT

Query:  ELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNL
        ELGNEVGRRLLV+QPRHCGRYVTLASINAGAEKWNRAAV+RRVMA ARIQKAPAYSRVDPMQNL
Subjt:  ELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNL

TrEMBL top hitse value%identityAlignment
A0A0A0K5I5 Uncharacterized protein7.2e-13490.74Show/hide
Query:  MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEA
        +MMMSGSVKPNEATYVSVLSS ANLDA+GVLCRGKEVHAYIIRNEGE SVFIGT LIDFYGKMGLLG AR +FNQMK REVC WNAMISSFASN RETEA
Subjt:  MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEA

Query:  LDLFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGAT
        LDLFA MKVEGIHPNEVTFV ILTACARGKLV+LGLQLF+SM  DFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPF+PDASVLGALLSACKIHGAT
Subjt:  LDLFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGAT

Query:  ELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNLVLESSS
        ELGNEVGRRLL +QPRHCGRYVTLAS+NAGAEKWNRAAVIRRVMA ARIQK PAYSRVDPMQNLVL S S
Subjt:  ELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNLVLESSS

A0A1S3C130 putative pentatricopeptide repeat-containing protein At1g103306.5e-13591.48Show/hide
Query:  MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEA
        MMMMSGSVKPNEATYVSVLSSCANLDA+GVLCRGKEVHAYIIRNEGE SVFIGTALIDFYGKMGLLG AR +FNQMK REVC WNAMISSFASNSRETEA
Subjt:  MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEA

Query:  LDLFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGAT
        LDLFA MKVEGIHPNEVTFV ILTACARGKLV+LGLQLF+SM  DFSIVPITEHYVCVVDLLGKAGLLREATE IESMPF+PDASVLGALLSACKIHGA 
Subjt:  LDLFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGAT

Query:  ELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNLVLESSS
        ELGNEVGRRLLV+QPRHCGRYVTLAS+NAGAEKWNRAAVIR VMA ARIQK PAYSRVDPMQNLVL S S
Subjt:  ELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNLVLESSS

A0A5D3C5L7 Putative pentatricopeptide repeat-containing protein1.3e-13591.85Show/hide
Query:  MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEA
        MMMMSGSVKPNEATYVSVLSSCANLDA+GVLCRGKEVHAYIIRNEGE SVFIGTALIDFYGKMGLLG AR +FNQMK REVC WNAMISSFASNSRETEA
Subjt:  MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEA

Query:  LDLFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGAT
        LDLFA MKVEGIHPNEVTFV ILTACARGKLV+LGLQLF+SM  DFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPF+PDASVLGALLSACKIHGA 
Subjt:  LDLFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGAT

Query:  ELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNLVLESSS
        ELGNEVGRRLLV+QPRHCGRYVTLAS+NAGAEKWNRAAVIR VMA ARIQK PAYSRVDPMQNLVL S S
Subjt:  ELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNLVLESSS

A0A6J1ERE5 putative pentatricopeptide repeat-containing protein At1g103308.8e-13288.15Show/hide
Query:  MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEA
        MMMM+G VKPNEATYVSVLSSCANL A+GVLCRGKE+HAYIIRNEGELSVFIGTAL+DFYGKMGLLGSAR +FNQMKNRE+CAWNAMISS +SN RE EA
Subjt:  MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEA

Query:  LDLFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGAT
        L+LFA+MK EGI PNEVTFV ILTACARGKLVE GL+LFRSMSNDFSIVPI EHYVC+VDLLGKAGLLREATEFIESMPF+PDA+VLGALL+AC IHGAT
Subjt:  LDLFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGAT

Query:  ELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNLVLESSS
        ELGNEVGRRLLV+QPRHCGRYVTLASINAGAEKW+ AAVIRRVMA ARIQKAPAYSRVDPMQNLV  SSS
Subjt:  ELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNLVLESSS

A0A6J1JN92 putative pentatricopeptide repeat-containing protein At1g103301.2e-12887.04Show/hide
Query:  MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEA
        MMMM+  VKPNEATYVSVLSSCANL A+GVLCRGKE+HAYIIRNEGELS FIGTAL+DFYGKMGLLGSAR +FNQMKNRE+CAWNAMISS +SN R  EA
Subjt:  MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEA

Query:  LDLFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGAT
        L+LFA+MKVEGI PNEVTFV ILTACARGKLVE GL+LFRSMSNDF IVPI EHYVC+VDLL KAGLLREATEFIESMPF+PDASVLGALL+AC IHGAT
Subjt:  LDLFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGAT

Query:  ELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNLVLESSS
        ELGNEVGRRLLV+QPRHCGRYVTLASINA AEKW+RAAVIRRVMA ARIQKAPAYSRVDPMQNLV  SSS
Subjt:  ELGNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNLVLESSS

SwissProt top hitse value%identityAlignment
O23337 Pentatricopeptide repeat-containing protein At4g148201.6e-5342.41Show/hide
Query:  MMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALD
        M    +KP+  +  SV+S+CANL   G+L + K VH+ I  N  E  + I  ALI+ Y K G L + R +F +M  R V +W++MI++ + +   ++AL 
Subjt:  MMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALD

Query:  LFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATEL
        LFA MK E + PNEVTFV +L  C+   LVE G ++F SM+++++I P  EHY C+VDL G+A LLREA E IESMP   +  + G+L+SAC+IHG  EL
Subjt:  LFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATEL

Query:  GNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVD
        G    +R+L ++P H G  V +++I A  ++W     IRRVM    + K    SR+D
Subjt:  GNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVD

Q9FIF7 Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic4.2e-5442.02Show/hide
Query:  MMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALD
        M   +V  NE T V VLS+C++L   G L  G+ VH+++     ELS F+G ALI+ Y + G +  AR +F  M++++V ++N MIS  A +    EA++
Subjt:  MMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALD

Query:  LFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATEL
         F +M   G  PN+VT V +L AC+ G L+++GL++F SM   F++ P  EHY C+VDLLG+ G L EA  FIE++P EPD  +LG LLSACKIHG  EL
Subjt:  LFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATEL

Query:  GNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVD
        G ++ +RL   +    G YV L+++ A + KW  +  IR  M  + I+K P  S ++
Subjt:  GNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVD

Q9FJY7 Pentatricopeptide repeat-containing protein At5g665201.4e-5442.58Show/hide
Query:  MMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALD
        M +  V+P+  +  + LS+CA L   G L +GK +H+Y+ +    +   +G  LID Y K G +  A  +F  +K + V AW A+IS +A +    EA+ 
Subjt:  MMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALD

Query:  LFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATEL
         F  M+  GI PN +TF  +LTAC+   LVE G  +F SM  D+++ P  EHY C+VDLLG+AGLL EA  FI+ MP +P+A + GALL AC+IH   EL
Subjt:  LFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATEL

Query:  GNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRV
        G E+G  L+ I P H GRYV  A+I+A  +KW++AA  RR+M    + K P  S +
Subjt:  GNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRV

Q9SX45 Pentatricopeptide repeat-containing protein At1g502704.5e-5642.41Show/hide
Query:  MMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALD
        M+   V PNE T  SVLS+CA++   G L RG+ VH Y+I+N  E++   GT LID Y K G L  A ++F ++  + V  W AMI+ FA++    +A D
Subjt:  MMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALD

Query:  LFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATEL
        LF  M    + PNEVTF+ +L+ACA G LVE G +LF SM   F++ P  +HY C+VDL G+ GLL EA   IE MP EP   V GAL  +C +H   EL
Subjt:  LFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATEL

Query:  GNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVD
        G     R++ +QP H GRY  LA++ + ++ W+  A +R+ M   ++ K+P +S ++
Subjt:  GNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVD

Q9SY75 Putative pentatricopeptide repeat-containing protein At1g103302.4e-7856.22Show/hide
Query:  VKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALDLFANM
        + PNEAT+VSVLSSCAN D QG +  GK++H Y++  E  L+  +GTAL+D YGK G L  A  IF+Q+++++VCAWNA+IS+ ASN R  +AL++F  M
Subjt:  VKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALDLFANM

Query:  KVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGNEVG
        K   +HPN +T + ILTACAR KLV+LG+QLF S+ +++ I+P +EHY CVVDL+G+AGLL +A  FI+S+PFEPDASVLGALL ACKIH  TELGN VG
Subjt:  KVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGNEVG

Query:  RRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYS
        ++L+ +QP+HCG+YV L++ NA    W+ A  +R+ M  A I+K PAYS
Subjt:  RRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYS

Arabidopsis top hitse value%identityAlignment
AT1G10330.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.7e-7956.22Show/hide
Query:  VKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALDLFANM
        + PNEAT+VSVLSSCAN D QG +  GK++H Y++  E  L+  +GTAL+D YGK G L  A  IF+Q+++++VCAWNA+IS+ ASN R  +AL++F  M
Subjt:  VKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALDLFANM

Query:  KVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGNEVG
        K   +HPN +T + ILTACAR KLV+LG+QLF S+ +++ I+P +EHY CVVDL+G+AGLL +A  FI+S+PFEPDASVLGALL ACKIH  TELGN VG
Subjt:  KVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGNEVG

Query:  RRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYS
        ++L+ +QP+HCG+YV L++ NA    W+ A  +R+ M  A I+K PAYS
Subjt:  RRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYS

AT1G50270.1 Pentatricopeptide repeat (PPR) superfamily protein3.2e-5742.41Show/hide
Query:  MMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALD
        M+   V PNE T  SVLS+CA++   G L RG+ VH Y+I+N  E++   GT LID Y K G L  A ++F ++  + V  W AMI+ FA++    +A D
Subjt:  MMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALD

Query:  LFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATEL
        LF  M    + PNEVTF+ +L+ACA G LVE G +LF SM   F++ P  +HY C+VDL G+ GLL EA   IE MP EP   V GAL  +C +H   EL
Subjt:  LFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATEL

Query:  GNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVD
        G     R++ +QP H GRY  LA++ + ++ W+  A +R+ M   ++ K+P +S ++
Subjt:  GNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVD

AT4G14820.1 Pentatricopeptide repeat (PPR) superfamily protein1.1e-5442.41Show/hide
Query:  MMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALD
        M    +KP+  +  SV+S+CANL   G+L + K VH+ I  N  E  + I  ALI+ Y K G L + R +F +M  R V +W++MI++ + +   ++AL 
Subjt:  MMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALD

Query:  LFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATEL
        LFA MK E + PNEVTFV +L  C+   LVE G ++F SM+++++I P  EHY C+VDL G+A LLREA E IESMP   +  + G+L+SAC+IHG  EL
Subjt:  LFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATEL

Query:  GNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVD
        G    +R+L ++P H G  V +++I A  ++W     IRRVM    + K    SR+D
Subjt:  GNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVD

AT5G59200.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.0e-5542.02Show/hide
Query:  MMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALD
        M   +V  NE T V VLS+C++L   G L  G+ VH+++     ELS F+G ALI+ Y + G +  AR +F  M++++V ++N MIS  A +    EA++
Subjt:  MMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALD

Query:  LFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATEL
         F +M   G  PN+VT V +L AC+ G L+++GL++F SM   F++ P  EHY C+VDLLG+ G L EA  FIE++P EPD  +LG LLSACKIHG  EL
Subjt:  LFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATEL

Query:  GNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVD
        G ++ +RL   +    G YV L+++ A + KW  +  IR  M  + I+K P  S ++
Subjt:  GNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVD

AT5G66520.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.0e-5542.58Show/hide
Query:  MMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALD
        M +  V+P+  +  + LS+CA L   G L +GK +H+Y+ +    +   +G  LID Y K G +  A  +F  +K + V AW A+IS +A +    EA+ 
Subjt:  MMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALD

Query:  LFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATEL
         F  M+  GI PN +TF  +LTAC+   LVE G  +F SM  D+++ P  EHY C+VDLLG+AGLL EA  FI+ MP +P+A + GALL AC+IH   EL
Subjt:  LFANMKVEGIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATEL

Query:  GNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRV
        G E+G  L+ I P H GRYV  A+I+A  +KW++AA  RR+M    + K P  S +
Subjt:  GNEVGRRLLVIQPRHCGRYVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATGATGAGTGGTTCGGTGAAGCCGAATGAAGCTACGTATGTGAGTGTGCTTTCTTCTTGTGCTAATTTAGATGCTCAAGGAGTTCTTTGTCGAGGGAAAGAAGT
ACATGCTTACATTATTCGAAATGAGGGTGAGTTGAGTGTTTTTATAGGGACGGCGTTGATAGATTTTTATGGGAAGATGGGATTATTAGGAAGTGCGAGAATTATTTTTA
ATCAAATGAAGAACAGGGAGGTCTGTGCTTGGAATGCAATGATTTCTTCATTTGCATCCAATAGTAGGGAAACAGAAGCACTAGACCTATTTGCTAATATGAAGGTTGAA
GGAATACATCCTAATGAGGTTACATTTGTTACGATTCTCACAGCGTGTGCTCGTGGCAAGCTCGTCGAATTGGGGCTGCAGTTATTTCGATCAATGTCGAATGATTTCTC
AATTGTACCGATTACTGAGCACTATGTCTGTGTGGTTGATCTCTTAGGGAAAGCAGGGCTTTTGAGAGAGGCAACTGAATTCATAGAGTCCATGCCATTTGAGCCTGATG
CTTCTGTTTTGGGAGCCCTTTTGAGTGCTTGTAAAATTCATGGAGCCACTGAACTGGGGAATGAAGTGGGAAGAAGATTGCTTGTGATACAGCCACGACATTGCGGTCGC
TACGTGACTTTGGCGAGTATAAATGCTGGAGCGGAGAAATGGAATCGTGCCGCAGTTATAAGAAGAGTAATGGCAGGCGCCAGGATTCAGAAAGCTCCAGCATATAGTAG
AGTAGATCCAATGCAAAATTTGGTGCTCGAGTCCTCCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGATGATGAGTGGTTCGGTGAAGCCGAATGAAGCTACGTATGTGAGTGTGCTTTCTTCTTGTGCTAATTTAGATGCTCAAGGAGTTCTTTGTCGAGGGAAAGAAGT
ACATGCTTACATTATTCGAAATGAGGGTGAGTTGAGTGTTTTTATAGGGACGGCGTTGATAGATTTTTATGGGAAGATGGGATTATTAGGAAGTGCGAGAATTATTTTTA
ATCAAATGAAGAACAGGGAGGTCTGTGCTTGGAATGCAATGATTTCTTCATTTGCATCCAATAGTAGGGAAACAGAAGCACTAGACCTATTTGCTAATATGAAGGTTGAA
GGAATACATCCTAATGAGGTTACATTTGTTACGATTCTCACAGCGTGTGCTCGTGGCAAGCTCGTCGAATTGGGGCTGCAGTTATTTCGATCAATGTCGAATGATTTCTC
AATTGTACCGATTACTGAGCACTATGTCTGTGTGGTTGATCTCTTAGGGAAAGCAGGGCTTTTGAGAGAGGCAACTGAATTCATAGAGTCCATGCCATTTGAGCCTGATG
CTTCTGTTTTGGGAGCCCTTTTGAGTGCTTGTAAAATTCATGGAGCCACTGAACTGGGGAATGAAGTGGGAAGAAGATTGCTTGTGATACAGCCACGACATTGCGGTCGC
TACGTGACTTTGGCGAGTATAAATGCTGGAGCGGAGAAATGGAATCGTGCCGCAGTTATAAGAAGAGTAATGGCAGGCGCCAGGATTCAGAAAGCTCCAGCATATAGTAG
AGTAGATCCAATGCAAAATTTGGTGCTCGAGTCCTCCTCTTGA
Protein sequenceShow/hide protein sequence
MMMMSGSVKPNEATYVSVLSSCANLDAQGVLCRGKEVHAYIIRNEGELSVFIGTALIDFYGKMGLLGSARIIFNQMKNREVCAWNAMISSFASNSRETEALDLFANMKVE
GIHPNEVTFVTILTACARGKLVELGLQLFRSMSNDFSIVPITEHYVCVVDLLGKAGLLREATEFIESMPFEPDASVLGALLSACKIHGATELGNEVGRRLLVIQPRHCGR
YVTLASINAGAEKWNRAAVIRRVMAGARIQKAPAYSRVDPMQNLVLESSS