; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10005442 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005442
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptiontranslation initiation factor IF-2 isoform X1
Genome locationChr07:2630899..2631663
RNA-Seq ExpressionHG10005442
SyntenyHG10005442
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144518.1 uncharacterized protein LOC101206223 [Cucumis sativus]3.4e-10390.39Show/hide
Query:  MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTR
        MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS  KNPSSSSSSSFA+ATYSSISSPNKSHGRMLVLTRPTP+PITSP PLSPQPQ RP SADHRPVPD  R
Subjt:  MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTR

Query:  PQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGY
        PQSDSDSISLRPLGRTGTG I PSPIP LEKD+EITPP V LHKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYGNYG   RYGEDGRPKSGGGY
Subjt:  PQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGY

Query:  ERMKGAGETDLGAMVNRPRSSGNRPSSSG
        ERMK  GE DLGAMVNRPRSSGNRPSSSG
Subjt:  ERMKGAGETDLGAMVNRPRSSGNRPSSSG

XP_008455486.1 PREDICTED: translation initiation factor IF-2 isoform X1 [Cucumis melo]3.4e-10390.83Show/hide
Query:  MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTR
        MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS  KNPSSSSSSSFA+ATYSSISSPNKSHGRMLVLTRPTPKPITSP  LSPQPQ RP SADHRPVPDQ R
Subjt:  MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTR

Query:  PQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGY
        PQSDSDSISLRPLGRTGTG I PSPI  LEK++EITPP V LHKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYGNYG  SRYGEDGRPKSGGGY
Subjt:  PQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGY

Query:  ERMKGAGETDLGAMVNRPRSSGNRPSSSG
        ERMKG GE DLGAMVNRPRSSGNRPSSSG
Subjt:  ERMKGAGETDLGAMVNRPRSSGNRPSSSG

XP_022952341.1 uncharacterized protein LOC111455051 isoform X1 [Cucurbita moschata]6.6e-9987.77Show/hide
Query:  MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP--SSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTR
        MAKTNKYTSIN+NHIYDK+LS NSKTGNNPSKNP  SSSSSSSFASATYSSISS NKSHGRMLVLTRPTPKPI+SPP LSPQPQ R PSAD RPV DQTR
Subjt:  MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP--SSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTR

Query:  PQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGY
        PQ +SDSISLRPLGRTGTG I PSPIP+LEKDKEI PP V LHKPEKFVPPHLRAGFVGKEERPV+VGIRSREANQRQYGNYG P RYGEDGRPKSGG Y
Subjt:  PQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGY

Query:  ERMKGAGETDLGAMVNRPRSSGNRPSSSG
        ERM GAGE D GAMVNRPRSSGNRP+SSG
Subjt:  ERMKGAGETDLGAMVNRPRSSGNRPSSSG

XP_038888443.1 translation initiation factor IF-2 isoform X1 [Benincasa hispida]4.1e-10993.64Show/hide
Query:  MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP------SSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVP
        MAKTNKYTSINFNHIYDKNLS NSKTGNNPSKNP      SSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQ RPPSADHRPVP
Subjt:  MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP------SSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVP

Query:  DQTR-PQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPP-AVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRP
        DQTR PQSDSDSISLRPLGRTGTGGI PSPIPSLEKDKEITPP AV LHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYG PSRYGEDGRP
Subjt:  DQTR-PQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPP-AVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRP

Query:  KSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSGW
        KSGGGYERMKGAGE +LGAMVNRPRSSGNRPSSSGW
Subjt:  KSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSGW

XP_038888444.1 putative protein TPRXL isoform X2 [Benincasa hispida]7.8e-10893.62Show/hide
Query:  MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP------SSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVP
        MAKTNKYTSINFNHIYDKNLS NSKTGNNPSKNP      SSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQ RPPSADHRPVP
Subjt:  MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP------SSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVP

Query:  DQTR-PQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPP-AVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRP
        DQTR PQSDSDSISLRPLGRTGTGGI PSPIPSLEKDKEITPP AV LHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYG PSRYGEDGRP
Subjt:  DQTR-PQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPP-AVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRP

Query:  KSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSG
        KSGGGYERMKGAGE +LGAMVNRPRSSGNRPSSSG
Subjt:  KSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSG

TrEMBL top hitse value%identityAlignment
A0A0A0K3D7 Uncharacterized protein1.4e-11087.3Show/hide
Query:  MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTR
        MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS  KNPSSSSSSSFA+ATYSSISSPNKSHGRMLVLTRPTP+PITSP PLSPQPQ RP SADHRPVPD  R
Subjt:  MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTR

Query:  PQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGY
        PQSDSDSISLRPLGRTGTG I PSPIP LEKD+EITPP V LHKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYGNYG   RYGEDGRPKSGGGY
Subjt:  PQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGY

Query:  ERMKGAGETDLGAMVNRPRSSGNRPSSSGWYASVKYSLFTFSKSLSVNGDYG
        ERMK  GE DLGAMVNRPRSSGNRPSSSGWY SVKY LF  S S  +N D G
Subjt:  ERMKGAGETDLGAMVNRPRSSGNRPSSSGWYASVKYSLFTFSKSLSVNGDYG

A0A1S3C160 translation initiation factor IF-2 isoform X11.6e-10390.83Show/hide
Query:  MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTR
        MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS  KNPSSSSSSSFA+ATYSSISSPNKSHGRMLVLTRPTPKPITSP  LSPQPQ RP SADHRPVPDQ R
Subjt:  MAKTNKYTSINFNHIYDKNLSSNSKTGNNPS--KNPSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTR

Query:  PQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGY
        PQSDSDSISLRPLGRTGTG I PSPI  LEK++EITPP V LHKPEKFVPPHLRAGFVGKEERPVNVGIRSRE NQRQYGNYG  SRYGEDGRPKSGGGY
Subjt:  PQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGY

Query:  ERMKGAGETDLGAMVNRPRSSGNRPSSSG
        ERMKG GE DLGAMVNRPRSSGNRPSSSG
Subjt:  ERMKGAGETDLGAMVNRPRSSGNRPSSSG

A0A6J1GJZ3 uncharacterized protein LOC111455051 isoform X13.2e-9987.77Show/hide
Query:  MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP--SSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTR
        MAKTNKYTSIN+NHIYDK+LS NSKTGNNPSKNP  SSSSSSSFASATYSSISS NKSHGRMLVLTRPTPKPI+SPP LSPQPQ R PSAD RPV DQTR
Subjt:  MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP--SSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTR

Query:  PQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGY
        PQ +SDSISLRPLGRTGTG I PSPIP+LEKDKEI PP V LHKPEKFVPPHLRAGFVGKEERPV+VGIRSREANQRQYGNYG P RYGEDGRPKSGG Y
Subjt:  PQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGY

Query:  ERMKGAGETDLGAMVNRPRSSGNRPSSSG
        ERM GAGE D GAMVNRPRSSGNRP+SSG
Subjt:  ERMKGAGETDLGAMVNRPRSSGNRPSSSG

A0A6J1GK55 uncharacterized protein LOC111455051 isoform X23.2e-9987.77Show/hide
Query:  MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP--SSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTR
        MAKTNKYTSIN+NHIYDK+LS NSKTGNNPSKNP  SSSSSSSFASATYSSISS NKSHGRMLVLTRPTPKPI+SPP LSPQPQ R PSAD RPV DQTR
Subjt:  MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP--SSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTR

Query:  PQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGY
        PQ +SDSISLRPLGRTGTG I PSPIP+LEKDKEI PP V LHKPEKFVPPHLRAGFVGKEERPV+VGIRSREANQRQYGNYG P RYGEDGRPKSGG Y
Subjt:  PQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGY

Query:  ERMKGAGETDLGAMVNRPRSSGNRPSSSG
        ERM GAGE D GAMVNRPRSSGNRP+SSG
Subjt:  ERMKGAGETDLGAMVNRPRSSGNRPSSSG

A0A6J1I0F0 uncharacterized protein LOC111468300 isoform X21.3e-9786.15Show/hide
Query:  MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP---SSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQT
        MAKTNKYTSIN+NHIYDK+LS NSKTGNNPSKNP   SSSSSSSFASATYSSISS NKSHGRMLVLTRPTPKPI+S P LSPQPQ R PSAD RPV DQT
Subjt:  MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNP---SSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQT

Query:  RPQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGG
         PQ +SDSISLRPLGRTGTG I PSPIP+LEKDKEI PP V LHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYG P RYGEDGRPKSGG 
Subjt:  RPQSDSDSISLRPLGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGG

Query:  YERMKGAGETDLGAMVNRPRSSGNRPSSSGW
         ERM GAGE D G MVNRPRSSGNRP+SSGW
Subjt:  YERMKGAGETDLGAMVNRPRSSGNRPSSSGW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G54680.1 proteophosphoglycan-related5.1e-2543.4Show/hide
Query:  NKYTSINFNHIYDKNLSSNSKTGNNPSKNPSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVP-DQTRPQSDS
        NKYTSINFNHI  K+              PSSSSSSS  SA+YSS++   +S+GRMLVLT+ +PKP+ SP          PP +    +P +Q     D 
Subjt:  NKYTSINFNHIYDKNLSSNSKTGNNPSKNPSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVP-DQTRPQSDS

Query:  DSISLRPLGRTGTGGIVPSPI--PSLEKDKEITPPA-VALH-KPEKFVPPHLRAGFVGKEERPVNVGIRSREAN---QRQYGNYGPPSR----YGEDGRP
          ISLRPLG TG+   +  PI  P + K  E+  P  V+L  KP++FVPPHLR GFV K+E+P     R R+ N    ++  N   P +    YG+ GRP
Subjt:  DSISLRPLGRTGTGGIVPSPI--PSLEKDKEITPPA-VALH-KPEKFVPPHLRAGFVGKEERPVNVGIRSREAN---QRQYGNYGPPSR----YGEDGRP

Query:  KSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSG
        KS GGYER++    TD       PR +GNRP +SG
Subjt:  KSGGGYERMKGAGETDLGAMVNRPRSSGNRPSSSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAAACCAACAAATACACCTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCTAAGAACCCATCTTCTTC
TTCTTCCTCCTCTTTCGCTTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCTCATGGCCGCATGCTTGTCCTGACTCGTCCCACCCCCAAACCCATCACCTCGC
CGCCACCCCTTTCCCCTCAACCCCAACCTCGACCCCCATCAGCCGATCATCGTCCAGTTCCGGATCAGACCCGTCCCCAATCCGATTCCGATTCGATCTCTCTTCGCCCT
CTCGGTCGGACCGGTACGGGTGGGATCGTTCCCTCTCCGATTCCGAGCTTGGAAAAGGACAAGGAGATTACCCCTCCAGCTGTGGCGTTGCATAAACCGGAGAAATTTGT
GCCACCTCATCTCCGGGCGGGGTTCGTTGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGGCAGTACGGGAATTATGGGCCTCCGA
GCCGGTACGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGGATGAAAGGGGCGGGTGAGACAGATCTGGGGGCGATGGTGAATCGGCCAAGATCCAGTGGG
AATCGCCCGAGTTCTAGTGGATGGTATGCTTCTGTCAAATACTCTCTTTTTACTTTCTCTAAGTCCTTGTCAGTTAATGGGGATTATGGAGACATAAACGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAAACCAACAAATACACCTCCATCAATTTCAATCACATCTACGACAAGAATCTCTCCTCCAATTCCAAAACTGGCAACAATCCCTCTAAGAACCCATCTTCTTC
TTCTTCCTCCTCTTTCGCTTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCTCATGGCCGCATGCTTGTCCTGACTCGTCCCACCCCCAAACCCATCACCTCGC
CGCCACCCCTTTCCCCTCAACCCCAACCTCGACCCCCATCAGCCGATCATCGTCCAGTTCCGGATCAGACCCGTCCCCAATCCGATTCCGATTCGATCTCTCTTCGCCCT
CTCGGTCGGACCGGTACGGGTGGGATCGTTCCCTCTCCGATTCCGAGCTTGGAAAAGGACAAGGAGATTACCCCTCCAGCTGTGGCGTTGCATAAACCGGAGAAATTTGT
GCCACCTCATCTCCGGGCGGGGTTCGTTGGGAAGGAGGAGAGACCTGTGAACGTTGGGATCCGATCTAGGGAGGCGAATCAGAGGCAGTACGGGAATTATGGGCCTCCGA
GCCGGTACGGTGAAGATGGGCGGCCGAAATCCGGCGGTGGGTATGAGAGGATGAAAGGGGCGGGTGAGACAGATCTGGGGGCGATGGTGAATCGGCCAAGATCCAGTGGG
AATCGCCCGAGTTCTAGTGGATGGTATGCTTCTGTCAAATACTCTCTTTTTACTTTCTCTAAGTCCTTGTCAGTTAATGGGGATTATGGAGACATAAACGAGTAG
Protein sequenceShow/hide protein sequence
MAKTNKYTSINFNHIYDKNLSSNSKTGNNPSKNPSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPPLSPQPQPRPPSADHRPVPDQTRPQSDSDSISLRP
LGRTGTGGIVPSPIPSLEKDKEITPPAVALHKPEKFVPPHLRAGFVGKEERPVNVGIRSREANQRQYGNYGPPSRYGEDGRPKSGGGYERMKGAGETDLGAMVNRPRSSG
NRPSSSGWYASVKYSLFTFSKSLSVNGDYGDINE