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HG10005452 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005452
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1
Genome locationChr07:2718730..2719173
RNA-Seq ExpressionHG10005452
SyntenyHG10005452
Gene Ontology termsGO:0000741 - karyogamy (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039497.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]2.7e-3286.81Show/hide
Query:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEGTF
        MASFAARAIFRSSSGKA TLLS GARAAPARSPFR ASKRPFS  S RIP+EMSFCVES++PFHSATSSALMTSMLSVS HSYGWLSE  F
Subjt:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEGTF

TYK15251.1 protein NUCLEAR FUSION DEFECTIVE 6 [Cucumis melo var. makuwa]9.3e-3385.11Show/hide
Query:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEGTFSPY
        MASFAARAIFRSSSGKA TLLS GARAAPARSPFR ASKRPFS  S RIP+EMSFCVES++PFHSATSSALMTSMLSVS HSYGWLSEG  S +
Subjt:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEGTFSPY

XP_038887455.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X1 [Benincasa hispida]1.4e-3390Show/hide
Query:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEGT
        MASFA RAIFRSSSGKA TLLSVGARAAPARSPFR ASKRPFSQCS+RIPVEMSFCVES++PFHSATSSALM SMLSVSRH+YGWLSE T
Subjt:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEGT

XP_038887456.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X2 [Benincasa hispida]1.9e-3390.91Show/hide
Query:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFA RAIFRSSSGKA TLLSVGARAAPARSPFR ASKRPFSQCS+RIPVEMSFCVES++PFHSATSSALM SMLSVSRH+YGWLSE
Subjt:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSE

XP_038887457.1 protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial-like isoform X3 [Benincasa hispida]4.9e-3491.01Show/hide
Query:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEG
        MASFA RAIFRSSSGKA TLLSVGARAAPARSPFR ASKRPFSQCS+RIPVEMSFCVES++PFHSATSSALM SMLSVSRH+YGWLSEG
Subjt:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEG

TrEMBL top hitse value%identityAlignment
A0A1S3C9E2 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X21.4e-3187.5Show/hide
Query:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAIFRSSSGK  TLLS GARAAPARSPFR ASKRPFS  S RIP+EMSFCVES++PFHSATSSALMTSMLSVS HSYGWLSE
Subjt:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSE

A0A1S3CB40 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.4e-3187.5Show/hide
Query:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSE
        MASFAARAIFRSSSGK  TLLS GARAAPARSPFR ASKRPFS  S RIP+EMSFCVES++PFHSATSSALMTSMLSVS HSYGWLSE
Subjt:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSE

A0A5A7TDD1 Protein NUCLEAR FUSION DEFECTIVE 61.3e-3286.81Show/hide
Query:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEGTF
        MASFAARAIFRSSSGKA TLLS GARAAPARSPFR ASKRPFS  S RIP+EMSFCVES++PFHSATSSALMTSMLSVS HSYGWLSE  F
Subjt:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEGTF

A0A5D3CTR8 Protein NUCLEAR FUSION DEFECTIVE 64.5e-3385.11Show/hide
Query:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEGTFSPY
        MASFAARAIFRSSSGKA TLLS GARAAPARSPFR ASKRPFS  S RIP+EMSFCVES++PFHSATSSALMTSMLSVS HSYGWLSEG  S +
Subjt:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEGTFSPY

A0A6J1I278 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.4e-3185.56Show/hide
Query:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEGT
        MASFAARAI RSS G+A TLLSVG+RAAPARS FR ASKRPFSQC++R+PVEMSFCVES++PFHSATSSALMTSMLSVSRHSYGWLSE T
Subjt:  MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEGT

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial7.2e-1250Show/hide
Query:  ARAIFRSSSGKATTLLSVGARAAPARSP---FRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSE
        AR++ R++S ++    S G  A+ A+S    FR  ++R      LR PVE+SFCVESL+P+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARAIFRSSSGKATTLLSVGARAAPARSP---FRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSE

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein4.3e-1244.44Show/hide
Query:  AARAIFRSSSGKATTL---LSVGARAAP--ARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEG
        AAR++FRS++ +A++     S G +  P  AR+ FR   + P +    R PVE+S CVE+++P+H+AT+SAL+ SMLSVSR   GW+ +G
Subjt:  AARAIFRSSSGKATTL---LSVGARAAP--ARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEG

AT1G28395.2 unknown protein4.3e-1244.44Show/hide
Query:  AARAIFRSSSGKATTL---LSVGARAAP--ARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEG
        AAR++FRS++ +A++     S G +  P  AR+ FR   + P +    R PVE+S CVE+++P+H+AT+SAL+ SMLSVSR   GW+ +G
Subjt:  AARAIFRSSSGKATTL---LSVGARAAP--ARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEG

AT2G20585.1 nuclear fusion defective 65.1e-1350Show/hide
Query:  ARAIFRSSSGKATTLLSVGARAAPARSP---FRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSE
        AR++ R++S ++    S G  A+ A+S    FR  ++R      LR PVE+SFCVESL+P+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARAIFRSSSGKATTLLSVGARAAPARSP---FRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSE

AT2G20585.2 nuclear fusion defective 65.1e-1350Show/hide
Query:  ARAIFRSSSGKATTLLSVGARAAPARSP---FRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSE
        AR++ R++S ++    S G  A+ A+S    FR  ++R      LR PVE+SFCVESL+P+HSAT+SALMTS LS+S  +YGWLS+
Subjt:  ARAIFRSSSGKATTLLSVGARAAPARSP---FRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSE

AT2G20585.3 nuclear fusion defective 61.0e-1350.57Show/hide
Query:  ARAIFRSSSGKATTLLSVGARAAPARSP---FRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEG
        AR++ R++S ++    S G  A+ A+S    FR  ++R      LR PVE+SFCVESL+P+HSAT+SALMTS LS+S  +YGWLS+G
Subjt:  ARAIFRSSSGKATTLLSVGARAAPARSP---FRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTTCGCCGCCAGGGCCATTTTCCGATCCTCCTCCGGCAAGGCTACAACTCTTTTGAGCGTTGGAGCCAGAGCAGCTCCGGCTCGTTCACCATTTCGCAATGC
TTCTAAACGACCTTTCTCTCAGTGCTCTCTAAGGATTCCGGTTGAAATGAGCTTCTGTGTGGAGTCCTTGATTCCATTCCATTCTGCTACTTCTTCGGCATTAATGACTT
CGATGCTTTCTGTCTCTCGCCATAGTTATGGTTGGCTTTCAGAAGGTACTTTCAGTCCTTATTCTTCTAGTAGTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTTCGCCGCCAGGGCCATTTTCCGATCCTCCTCCGGCAAGGCTACAACTCTTTTGAGCGTTGGAGCCAGAGCAGCTCCGGCTCGTTCACCATTTCGCAATGC
TTCTAAACGACCTTTCTCTCAGTGCTCTCTAAGGATTCCGGTTGAAATGAGCTTCTGTGTGGAGTCCTTGATTCCATTCCATTCTGCTACTTCTTCGGCATTAATGACTT
CGATGCTTTCTGTCTCTCGCCATAGTTATGGTTGGCTTTCAGAAGGTACTTTCAGTCCTTATTCTTCTAGTAGTTTCTAG
Protein sequenceShow/hide protein sequence
MASFAARAIFRSSSGKATTLLSVGARAAPARSPFRNASKRPFSQCSLRIPVEMSFCVESLIPFHSATSSALMTSMLSVSRHSYGWLSEGTFSPYSSSSF