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HG10005458 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005458
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationChr07:2756923..2757342
RNA-Seq ExpressionHG10005458
SyntenyHG10005458
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645727.1 hypothetical protein Csa_020381 [Cucumis sativus]2.5e-6091.47Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        MSVEIL+SATI+NFVEDEEAFSGWIRERFSHLD+DRDGVLCYGEMLKELQSLRVLETHFGIDTKPDP ELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLLEENSFLKKAVD
        MMLAMANGIG SPVQMLLEEN   K +V+
Subjt:  MMLAMANGIGCSPVQMLLEENSFLKKAVD

XP_004144527.1 uncharacterized protein LOC101208564 [Cucumis sativus]1.4e-6695.56Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        MSVEIL+SATI+NFVEDEEAFSGWIRERFSHLD+DRDGVLCYGEMLKELQSLRVLETHFGIDTKPDP ELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL
        MMLAMANGIG SPVQMLLEENSFLKKAVDREST L
Subjt:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL

XP_008455503.1 PREDICTED: uncharacterized protein LOC103495655 [Cucumis melo]4.0e-6695.56Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRV ETHFGIDTKPDP ELSSVY SLFLQFDRDCNGKVDLGEFM ETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL
        MMLAMANGIG SPVQMLLEENSFLKKAVDREST L
Subjt:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL

XP_022952569.1 uncharacterized protein LOC111455222 [Cucurbita moschata]2.6e-5785.93Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        MSVEILDSATIV+FVEDEEAF   I E F  LDMDRDGVL YGEMLKELQSLRVLETHFG+D KPDPEELSSVY SLF QFDRDCNGKVDLGEFM ET+K
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL
        MMLAMANGIG SPV+M+LEENSFLKKAVDREST L
Subjt:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL

XP_038888629.1 uncharacterized protein LOC120078427 [Benincasa hispida]6.4e-6494.07Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        MSVEILDSATIVNFVEDEEAFS  IRERFSHLD+DRDGVLCYGEMLKELQSLRVLETHFGIDTKPDP+ELSSVYGSLF QFDRDCNGKVDLGEFM ETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL
        MMLAMANGIG SPVQMLLEENSFLKKAVDREST L
Subjt:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL

TrEMBL top hitse value%identityAlignment
A0A0A0K1Y0 Calcium ion binding protein6.7e-6795.56Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        MSVEIL+SATI+NFVEDEEAFSGWIRERFSHLD+DRDGVLCYGEMLKELQSLRVLETHFGIDTKPDP ELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL
        MMLAMANGIG SPVQMLLEENSFLKKAVDREST L
Subjt:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL

A0A1S3C1T0 uncharacterized protein LOC1034956551.9e-6695.56Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRV ETHFGIDTKPDP ELSSVY SLFLQFDRDCNGKVDLGEFM ETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL
        MMLAMANGIG SPVQMLLEENSFLKKAVDREST L
Subjt:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL

A0A5D3DDG8 Calcium-binding EF-hand family protein1.9e-6695.56Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRV ETHFGIDTKPDP ELSSVY SLFLQFDRDCNGKVDLGEFM ETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL
        MMLAMANGIG SPVQMLLEENSFLKKAVDREST L
Subjt:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL

A0A6J1EXF9 uncharacterized protein LOC1114370611.7e-5783.7Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        MSVEILDSATIVNFVED+E F   +RERFSHLD+D DGVL Y EML+ELQSLRV ETHFGID KPDP+ELSSVYGSLFLQFDRDC+GKVD+GEFMEETKK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL
        MM+AMANGIG SPVQM+LEENSFLKKAV+REST +
Subjt:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL

A0A6J1GM29 uncharacterized protein LOC1114552221.3e-5785.93Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        MSVEILDSATIV+FVEDEEAF   I E F  LDMDRDGVL YGEMLKELQSLRVLETHFG+D KPDPEELSSVY SLF QFDRDCNGKVDLGEFM ET+K
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL
        MMLAMANGIG SPV+M+LEENSFLKKAVDREST L
Subjt:  MMLAMANGIGCSPVQMLLEENSFLKKAVDRESTNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein6.7e-1128.91Show/hide
Query:  ILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLA
        ++ S T++ F+ D ++F     + F  LD+D++G+L   E+ + L ++  +E+          +E  +VY ++F +F  D   K     F +   +++ A
Subjt:  ILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLA

Query:  MANGIGCSPVQMLLEENSFLKKAVDRES
        MA GIG SPV M++  +  + KAV  ES
Subjt:  MANGIGCSPVQMLLEENSFLKKAVDRES

AT2G44310.1 Calcium-binding EF-hand family protein3.4e-3145.26Show/hide
Query:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK
        M V ++D +T+ +FV+DEE F   + ERF+ LD+++DGVL   E+ K  +S+R+LE+HFG+D     +EL+++Y S+F +FD D +G VDL EF  E KK
Subjt:  MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGCSPVQMLL--EENSFLKKAVDRESTNL
        ++LA+A+G+G  P+ M+L  ++++FLKKA D E++ L
Subjt:  MMLAMANGIGCSPVQMLL--EENSFLKKAVDRESTNL

AT4G38810.2 Calcium-binding EF-hand family protein3.7e-0927.2Show/hide
Query:  EILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMML
        ++LD + IV  VE+E+ F  ++ ++F  LD D DG L   E+   +  +          T PD +    +Y  +  +F      KV   EF E    ++L
Subjt:  EILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMML

Query:  AMANGIGCSPVQMLLEENSFLKKAV
         MA G+   P+ +L  +   L + V
Subjt:  AMANGIGCSPVQMLLEENSFLKKAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTAGAAATCTTGGACAGTGCAACAATTGTGAATTTTGTGGAAGATGAAGAAGCTTTTAGTGGTTGGATTAGAGAGCGTTTTAGCCATCTTGACATGGATAGAGA
TGGAGTTCTTTGTTATGGAGAGATGTTAAAGGAGTTGCAAAGTCTTAGAGTGTTGGAGACTCATTTCGGGATCGATACGAAACCCGACCCCGAAGAGCTTTCTTCCGTCT
ATGGCTCCTTGTTCTTGCAGTTCGATCGAGATTGCAATGGAAAAGTTGATCTTGGTGAATTCATGGAAGAAACCAAGAAGATGATGCTGGCCATGGCCAATGGAATTGGC
TGTTCTCCTGTTCAAATGTTGTTGGAAGAAAATAGTTTCTTGAAGAAAGCTGTGGATAGAGAGTCCACAAACTTGCTGCAGCTTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGTAGAAATCTTGGACAGTGCAACAATTGTGAATTTTGTGGAAGATGAAGAAGCTTTTAGTGGTTGGATTAGAGAGCGTTTTAGCCATCTTGACATGGATAGAGA
TGGAGTTCTTTGTTATGGAGAGATGTTAAAGGAGTTGCAAAGTCTTAGAGTGTTGGAGACTCATTTCGGGATCGATACGAAACCCGACCCCGAAGAGCTTTCTTCCGTCT
ATGGCTCCTTGTTCTTGCAGTTCGATCGAGATTGCAATGGAAAAGTTGATCTTGGTGAATTCATGGAAGAAACCAAGAAGATGATGCTGGCCATGGCCAATGGAATTGGC
TGTTCTCCTGTTCAAATGTTGTTGGAAGAAAATAGTTTCTTGAAGAAAGCTGTGGATAGAGAGTCCACAAACTTGCTGCAGCTTAATTAA
Protein sequenceShow/hide protein sequence
MSVEILDSATIVNFVEDEEAFSGWIRERFSHLDMDRDGVLCYGEMLKELQSLRVLETHFGIDTKPDPEELSSVYGSLFLQFDRDCNGKVDLGEFMEETKKMMLAMANGIG
CSPVQMLLEENSFLKKAVDRESTNLLQLN