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HG10005459 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005459
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionGlycine rich protein
Genome locationChr07:2764806..2766103
RNA-Seq ExpressionHG10005459
SyntenyHG10005459
Gene Ontology termsNA
InterPro domainsIPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CEG62450.1 Glycine rich protein [Cucumis sativus]4.4e-1562.89Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGE--YDRGY-----------------GDYGGRGGYGGPGGGYGGGC
        MSSK FVF+GL LAFVL LS EV AR +AETS K DN+ATVETNGVED KYG   YDRGY                 G YGGRGGYGG  GGYG GC
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGE--YDRGY-----------------GDYGGRGGYGGPGGGYGGGC

KAA0059138.1 cold and drought-regulated protein CORA-like [Cucumis melo var. makuwa]2.0e-1564.58Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKY-GEYDRGY-----------------GDYGGRGGYGGPGGGYGGGC
        MSSK FVF+GLLLAFVL LS EV AR +AETS K DN+ATVETNGVED KY G YDRGY                 G YGGRGGYGG  GGYG GC
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKY-GEYDRGY-----------------GDYGGRGGYGGPGGGYGGGC

KGN43456.1 hypothetical protein Csa_020456 [Cucumis sativus]1.5e-1563.92Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGE--YDRGY-----------------GDYGGRGGYGGPGGGYGGGC
        MSSK FVF+GLLLAFVL LS EV AR +AETS K DN+ATVETNGVED KYG   YDRGY                 G YGGRGGYGG  GGYG GC
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGE--YDRGY-----------------GDYGGRGGYGGPGGGYGGGC

NP_001267708.1 glycine-rich protein-like precursor [Cucumis sativus]1.5e-1563.92Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGE--YDRGY-----------------GDYGGRGGYGGPGGGYGGGC
        MSSK FVF+GLLLAFVL LS EV AR +AETS K DN+ATVETNGVED KYG   YDRGY                 G YGGRGGYGG  GGYG GC
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGE--YDRGY-----------------GDYGGRGGYGGPGGGYGGGC

XP_022952571.1 glycine-rich protein-like isoform X2 [Cucurbita moschata]5.7e-1566.28Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGEYDRGY---GDYGGRGGYG-----GPGGGYGGGC
        MSSK F+F+GLL A VL +S EV AR +AETS KK+N+AT ETNGVED KYG YD GY   G YGGRGGYG     G GGGYG GC
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGEYDRGY---GDYGGRGGYG-----GPGGGYGGGC

TrEMBL top hitse value%identityAlignment
A0A0A0K6L7 Uncharacterized protein7.3e-1663.92Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGE--YDRGY-----------------GDYGGRGGYGGPGGGYGGGC
        MSSK FVF+GLLLAFVL LS EV AR +AETS K DN+ATVETNGVED KYG   YDRGY                 G YGGRGGYGG  GGYG GC
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGE--YDRGY-----------------GDYGGRGGYGGPGGGYGGGC

A0A0A1IXP4 Glycine rich protein2.1e-1562.89Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGE--YDRGY-----------------GDYGGRGGYGGPGGGYGGGC
        MSSK FVF+GL LAFVL LS EV AR +AETS K DN+ATVETNGVED KYG   YDRGY                 G YGGRGGYGG  GGYG GC
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGE--YDRGY-----------------GDYGGRGGYGGPGGGYGGGC

A0A5D3DE59 Cold and drought-regulated protein CORA-like9.6e-1664.58Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKY-GEYDRGY-----------------GDYGGRGGYGGPGGGYGGGC
        MSSK FVF+GLLLAFVL LS EV AR +AETS K DN+ATVETNGVED KY G YDRGY                 G YGGRGGYGG  GGYG GC
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKY-GEYDRGY-----------------GDYGGRGGYGGPGGGYGGGC

A0A6J1GKL6 glycine-rich protein-like isoform X22.8e-1566.28Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGEYDRGY---GDYGGRGGYG-----GPGGGYGGGC
        MSSK F+F+GLL A VL +S EV AR +AETS KK+N+AT ETNGVED KYG YD GY   G YGGRGGYG     G GGGYG GC
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGEYDRGY---GDYGGRGGYG-----GPGGGYGGGC

A0P8W6 Cell wall glycine-rich protein7.3e-1663.92Show/hide
Query:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGE--YDRGY-----------------GDYGGRGGYGGPGGGYGGGC
        MSSK FVF+GLLLAFVL LS EV AR +AETS K DN+ATVETNGVED KYG   YDRGY                 G YGGRGGYGG  GGYG GC
Subjt:  MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGE--YDRGY-----------------GDYGGRGGYGGPGGGYGGGC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCAAAACTTTTGTTTTCGTCGGTCTTCTTCTCGCCTTTGTTCTCTTCCTCTCTTTGGAGGTGGTCGCGAGAGGCGTCGCAGAAACCTCCTTCAAGAAAGACAA
TAAGGCCACGGTAGAGACCAATGGCGTAGAGGATGGCAAGTATGGGGAGTACGATAGAGGCTATGGTGATTACGGTGGCCGCGGCGGCTACGGTGGCCCCGGTGGTGGAT
ATGGAGGGGGTTGCTGCTCCAACGCTAACGACCACACTTCTGTGATGTTTGGCGCGACCAGCTCTGGTTGTGAGAGAGGAGAGCAGCTTCAACCAACTTCGGCGGCAAGA
GAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCAAAACTTTTGTTTTCGTCGGTCTTCTTCTCGCCTTTGTTCTCTTCCTCTCTTTGGAGGTGGTCGCGAGAGGCGTCGCAGAAACCTCCTTCAAGAAAGACAA
TAAGGCCACGGTAGAGACCAATGGCGTAGAGGATGGCAAGTATGGGGAGTACGATAGAGGCTATGGTGATTACGGTGGCCGCGGCGGCTACGGTGGCCCCGGTGGTGGAT
ATGGAGGGGGTTGCTGCTCCAACGCTAACGACCACACTTCTGTGATGTTTGGCGCGACCAGCTCTGGTTGTGAGAGAGGAGAGCAGCTTCAACCAACTTCGGCGGCAAGA
GAATGA
Protein sequenceShow/hide protein sequence
MSSKTFVFVGLLLAFVLFLSLEVVARGVAETSFKKDNKATVETNGVEDGKYGEYDRGYGDYGGRGGYGGPGGGYGGGCCSNANDHTSVMFGATSSGCERGEQLQPTSAAR
E