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HG10005461 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005461
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionglycine-rich protein-like
Genome locationChr07:2786688..2787174
RNA-Seq ExpressionHG10005461
SyntenyHG10005461
Gene Ontology termsNA
InterPro domainsIPR010800 - Glycine rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059138.1 cold and drought-regulated protein CORA-like [Cucumis melo var. makuwa]5.0e-3582.35Show/hide
Query:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKENEATVEINGVEDAKY-GGYDRGYGG---GRGGYGHGGYGGRGGYGGRGGYGGGHGG---GCRYG
        MSSK F+F+GLLLAFVLL SSEV ARDLAETSS+ +NEATVE NGVEDAKY GGYDRGYGG   GRGGYG GGY GRGGYGGRGGYGGG GG   GCRYG
Subjt:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKENEATVEINGVEDAKY-GGYDRGYGG---GRGGYGHGGYGGRGGYGGRGGYGGGHGG---GCRYG

Query:  RCGHRCCNYAGEVVEGAKP
        RCG+RCC+YAGEVVEGAKP
Subjt:  RCGHRCCNYAGEVVEGAKP

XP_022952570.1 cold and drought-regulated protein CORA-like isoform X1 [Cucurbita moschata]5.0e-3579.17Show/hide
Query:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKENEATVEINGVEDAKYGGYDRGYGGGRGGYGHGGYGGRGGYGGRGGY--------GGGHGGGCRY
        MSSK FIF+GLL A VLL SSEV ARDLAETS++KENEAT E NGVEDAKYGGYD GY GGRGGYG GGYGGRGGYGGRGGY        GGG+G GCRY
Subjt:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKENEATVEINGVEDAKYGGYDRGYGGGRGGYGHGGYGGRGGYGGRGGY--------GGGHGGGCRY

Query:  GRCGHRCCNYAGEVVEGAKP
        GRCG+RCC+YAGEVVEGAKP
Subjt:  GRCGHRCCNYAGEVVEGAKP

XP_022969295.1 glycine-rich protein-like [Cucurbita maxima]1.9e-3480Show/hide
Query:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKENEATVEINGVEDAKYGGYDRGYG-----GGRGGY-GHGGYGGRGGYGGRGGYG--GGHGGGCRY
        MSSK FIF+GLL AF+LL SSEV ARDLAETS+ KE EATVE NGVEDAKYGGYD GYG     GGRGGY G GGYGGRGGYGGRGGYG  GG+G GCRY
Subjt:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKENEATVEINGVEDAKYGGYDRGYG-----GGRGGY-GHGGYGGRGGYGGRGGYG--GGHGGGCRY

Query:  GRCGHRCCNYAGEVVEGAKP
        GRCG+RCC+YAGEVVEGAKP
Subjt:  GRCGHRCCNYAGEVVEGAKP

XP_038886926.1 cold and drought-regulated protein CORA-like isoform X1 [Benincasa hispida]1.7e-3582.05Show/hide
Query:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKEN----EATVEINGVEDAKY-GGYDRGYGGGRGGYGHGGYGGRGGYGGRGGYGGGHGGGCRYGRC
        MSSK F+F+GLLLAFVLL SSEV ARDLAETSS+K+N    E TVE NGVEDAKY GGYDRGYGGGRGGYGHGGY G GGYGGRGGYGGG+  GCRYGRC
Subjt:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKEN----EATVEINGVEDAKY-GGYDRGYGGGRGGYGHGGYGGRGGYGGRGGYGGGHGGGCRYGRC

Query:  GHRCCNYAGEVVEGAKP
        G+RCC+YAGEVVEGAKP
Subjt:  GHRCCNYAGEVVEGAKP

XP_038886927.1 cold and drought-regulated protein CORA-like isoform X2 [Benincasa hispida]3.2e-3784.96Show/hide
Query:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKENEATVEINGVEDAKY-GGYDRGYGGGRGGYGHGGYGGRGGYGGRGGYGGGHGGGCRYGRCGHRC
        MSSK F+F+GLLLAFVLL SSEV ARDLAETSS+K+NE TVE NGVEDAKY GGYDRGYGGGRGGYGHGGY G GGYGGRGGYGGG+  GCRYGRCG+RC
Subjt:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKENEATVEINGVEDAKY-GGYDRGYGGGRGGYGHGGYGGRGGYGGRGGYGGGHGGGCRYGRCGHRC

Query:  CNYAGEVVEGAKP
        C+YAGEVVEGAKP
Subjt:  CNYAGEVVEGAKP

TrEMBL top hitse value%identityAlignment
A0A1S3C180 cold and drought-regulated protein CORA-like1.2e-3481.51Show/hide
Query:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKENEATVEINGVEDAKY-GGYDRGYGG---GRGGYGHGGYGGRGGYGGRGGYGGGHGG---GCRYG
        MSSK F+F+GLLLAFVLL SSEV ARDLAET S+ +NEATVE NGVEDAKY GGYDRGYGG   GRGGYG GGY GRGGYGGRGGYGGG GG   GCRYG
Subjt:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKENEATVEINGVEDAKY-GGYDRGYGG---GRGGYGHGGYGGRGGYGGRGGYGGGHGG---GCRYG

Query:  RCGHRCCNYAGEVVEGAKP
        RCG+RCC+YAGEVVEGAKP
Subjt:  RCGHRCCNYAGEVVEGAKP

A0A5D3DE59 Cold and drought-regulated protein CORA-like2.4e-3582.35Show/hide
Query:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKENEATVEINGVEDAKY-GGYDRGYGG---GRGGYGHGGYGGRGGYGGRGGYGGGHGG---GCRYG
        MSSK F+F+GLLLAFVLL SSEV ARDLAETSS+ +NEATVE NGVEDAKY GGYDRGYGG   GRGGYG GGY GRGGYGGRGGYGGG GG   GCRYG
Subjt:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKENEATVEINGVEDAKY-GGYDRGYGG---GRGGYGHGGYGGRGGYGGRGGYGGGHGG---GCRYG

Query:  RCGHRCCNYAGEVVEGAKP
        RCG+RCC+YAGEVVEGAKP
Subjt:  RCGHRCCNYAGEVVEGAKP

A0A6J1GKL6 glycine-rich protein-like isoform X23.9e-3378.95Show/hide
Query:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKENEATVEINGVEDAKYGGYDRGYGGGRGGYGHGGYGGRGGYGGRGGY--GGGHGGGCRYGRCGHR
        MSSK FIF+GLL A VLL SSEV ARDLAETS++KENEAT E NGVEDAKYGGYD GYG      G GGYGGRGGYGGRGGY  GGG+G GCRYGRCG+R
Subjt:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKENEATVEINGVEDAKYGGYDRGYGGGRGGYGHGGYGGRGGYGGRGGY--GGGHGGGCRYGRCGHR

Query:  CCNYAGEVVEGAKP
        CC+YAGEVVEGAKP
Subjt:  CCNYAGEVVEGAKP

A0A6J1GM55 cold and drought-regulated protein CORA-like isoform X12.4e-3579.17Show/hide
Query:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKENEATVEINGVEDAKYGGYDRGYGGGRGGYGHGGYGGRGGYGGRGGY--------GGGHGGGCRY
        MSSK FIF+GLL A VLL SSEV ARDLAETS++KENEAT E NGVEDAKYGGYD GY GGRGGYG GGYGGRGGYGGRGGY        GGG+G GCRY
Subjt:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKENEATVEINGVEDAKYGGYDRGYGGGRGGYGHGGYGGRGGYGGRGGY--------GGGHGGGCRY

Query:  GRCGHRCCNYAGEVVEGAKP
        GRCG+RCC+YAGEVVEGAKP
Subjt:  GRCGHRCCNYAGEVVEGAKP

A0A6J1HZJ5 glycine-rich protein-like9.3e-3580Show/hide
Query:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKENEATVEINGVEDAKYGGYDRGYG-----GGRGGY-GHGGYGGRGGYGGRGGYG--GGHGGGCRY
        MSSK FIF+GLL AF+LL SSEV ARDLAETS+ KE EATVE NGVEDAKYGGYD GYG     GGRGGY G GGYGGRGGYGGRGGYG  GG+G GCRY
Subjt:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKENEATVEINGVEDAKYGGYDRGYG-----GGRGGY-GHGGYGGRGGYGGRGGYG--GGHGGGCRY

Query:  GRCGHRCCNYAGEVVEGAKP
        GRCG+RCC+YAGEVVEGAKP
Subjt:  GRCGHRCCNYAGEVVEGAKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G05540.1 Glycine-rich protein family9.6e-0848.82Show/hide
Query:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKEN------EATVEINGVEDAKYGGY-DRGYGGG-RGGYGH--GGYGGR-GGYGGR-GGYGGGHGG
        M+SK  +F+ L++  VLL +SEVVARDLAE S+E++N      + T +  G     YGG+   GYGG   GGYG+  GGY  R GGYG R GGYG   GG
Subjt:  MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKEN------EATVEINGVEDAKYGGY-DRGYGGG-RGGYGH--GGYGGR-GGYGGR-GGYGGGHGG

Query:  GCRYGRC--GH-----RCCNYAGEVVE
         CRYG C  G+     RCC YAG+ V+
Subjt:  GCRYGRC--GH-----RCCNYAGEVVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCAAAGTTTTTATTTTCGTCGGTCTTCTTCTCGCCTTTGTTCTCCTCTTCTCTTCGGAGGTGGTTGCGAGAGACCTCGCAGAGACCTCCTCCGAGAAGGAAAA
CGAGGCTACGGTGGAAATCAATGGCGTAGAGGATGCCAAGTATGGAGGGTACGACAGAGGCTATGGCGGTGGTCGTGGTGGTTACGGTCATGGTGGCTATGGTGGTCGCG
GTGGTTACGGCGGCCGAGGTGGTTACGGTGGCGGCCACGGAGGGGGTTGCCGGTATGGTAGGTGCGGGCACAGGTGCTGCAACTACGCCGGTGAAGTGGTAGAGGGCGCA
AAACCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCAAAGTTTTTATTTTCGTCGGTCTTCTTCTCGCCTTTGTTCTCCTCTTCTCTTCGGAGGTGGTTGCGAGAGACCTCGCAGAGACCTCCTCCGAGAAGGAAAA
CGAGGCTACGGTGGAAATCAATGGCGTAGAGGATGCCAAGTATGGAGGGTACGACAGAGGCTATGGCGGTGGTCGTGGTGGTTACGGTCATGGTGGCTATGGTGGTCGCG
GTGGTTACGGCGGCCGAGGTGGTTACGGTGGCGGCCACGGAGGGGGTTGCCGGTATGGTAGGTGCGGGCACAGGTGCTGCAACTACGCCGGTGAAGTGGTAGAGGGCGCA
AAACCTTAA
Protein sequenceShow/hide protein sequence
MSSKVFIFVGLLLAFVLLFSSEVVARDLAETSSEKENEATVEINGVEDAKYGGYDRGYGGGRGGYGHGGYGGRGGYGGRGGYGGGHGGGCRYGRCGHRCCNYAGEVVEGA
KP