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HG10005483 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005483
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr07:2954940..2956236
RNA-Seq ExpressionHG10005483
SyntenyHG10005483
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN43428.1 hypothetical protein Csa_020467 [Cucumis sativus]1.1e-2771.05Show/hide
Query:  NTASSTVTISIPSLSIFFFFFF---FIFLTAVSSLFSSSSELEFDFNFFVSSLTSLVFCSSDSPARIPKPDL------------FRYTARRGVASSFCVN
        N   ST+TISIPSLSIFFFFFF   F FL  VSSLFSSSSEL+FDFNFFVS  TSLVFC+SDSPA IP PDL             +YTARR V SSFCVN
Subjt:  NTASSTVTISIPSLSIFFFFFF---FIFLTAVSSLFSSSSELEFDFNFFVSSLTSLVFCSSDSPARIPKPDL------------FRYTARRGVASSFCVN

Query:  QSVENKSSLELSGL
        Q VENKSSLELSGL
Subjt:  QSVENKSSLELSGL
TrEMBL top hitse value%identityAlignment
A0A0A0K1U7 Uncharacterized protein5.3e-2871.05Show/hide
Query:  NTASSTVTISIPSLSIFFFFFF---FIFLTAVSSLFSSSSELEFDFNFFVSSLTSLVFCSSDSPARIPKPDL------------FRYTARRGVASSFCVN
        N   ST+TISIPSLSIFFFFFF   F FL  VSSLFSSSSEL+FDFNFFVS  TSLVFC+SDSPA IP PDL             +YTARR V SSFCVN
Subjt:  NTASSTVTISIPSLSIFFFFFF---FIFLTAVSSLFSSSSELEFDFNFFVSSLTSLVFCSSDSPARIPKPDL------------FRYTARRGVASSFCVN

Query:  QSVENKSSLELSGL
        Q VENKSSLELSGL
Subjt:  QSVENKSSLELSGL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTTAGCTGTTATCAACTTTGCCGGGAAATTCATCGGACTTCTCTCAGCCGGAGCACCAAACACTGCTTCTTCAACTGTAACCATTTCAATTCCTTCTCTCTCTAT
CTTCTTCTTCTTCTTCTTCTTCATCTTCCTTACGGCGGTCTCTTCTCTCTTTTCTTCTTCATCGGAGCTTGAATTTGACTTCAATTTCTTCGTCTCTTCACTGACTTCGC
TGGTCTTCTGCAGCTCTGATTCGCCTGCTCGAATTCCGAAGCCGGACTTGTTTCGGTATACAGCTAGACGTGGCGTGGCATCCAGTTTCTGTGTCAATCAAAGTGTGGAG
AACAAGAGTTCTTTAGAGCTCTCTGGCTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTTAGCTGTTATCAACTTTGCCGGGAAATTCATCGGACTTCTCTCAGCCGGAGCACCAAACACTGCTTCTTCAACTGTAACCATTTCAATTCCTTCTCTCTCTAT
CTTCTTCTTCTTCTTCTTCTTCATCTTCCTTACGGCGGTCTCTTCTCTCTTTTCTTCTTCATCGGAGCTTGAATTTGACTTCAATTTCTTCGTCTCTTCACTGACTTCGC
TGGTCTTCTGCAGCTCTGATTCGCCTGCTCGAATTCCGAAGCCGGACTTGTTTCGGTATACAGCTAGACGTGGCGTGGCATCCAGTTTCTGTGTCAATCAAAGTGTGGAG
AACAAGAGTTCTTTAGAGCTCTCTGGCTTATGA
Protein sequenceShow/hide protein sequence
MLLAVINFAGKFIGLLSAGAPNTASSTVTISIPSLSIFFFFFFFIFLTAVSSLFSSSSELEFDFNFFVSSLTSLVFCSSDSPARIPKPDLFRYTARRGVASSFCVNQSVE
NKSSLELSGL