; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10005489 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005489
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionChlorophyll a/b-binding family protein
Genome locationChr07:2991202..2991576
RNA-Seq ExpressionHG10005489
SyntenyHG10005489
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048752.1 hypothetical protein E6C27_scaffold43G00600 [Cucumis melo var. makuwa]2.2e-3977.17Show/hide
Query:  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVDASIMHL--QSNGSSTSRDLDSNSLSLGLNLQ-NAGKEVDIDVHEARLMPGDT
        MGRH SEPTMVGTSIALLQERFRQLQK+KQ+RE+KELLNLL ESNRVDASIMHL  + NGS T R LDSNSLSLGLNL+ N GK+VDID+HEAR +P DT
Subjt:  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVDASIMHL--QSNGSSTSRDLDSNSLSLGLNLQ-NAGKEVDIDVHEARLMPGDT

Query:  KFWSGNSVMTSVLRSFDSPDVDTTLHL
        KF   NS M S LRSFD+ +VDTTLHL
Subjt:  KFWSGNSVMTSVLRSFDSPDVDTTLHL

KAE8646145.1 hypothetical protein Csa_016195, partial [Cucumis sativus]5.8e-4086.92Show/hide
Query:  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVDASIMHLQSNGSSTSRDLDSNSLSLGLNLQ-NAGKEVDIDVHEARLMPGDTKF
        MGRH+SEPTMVGTSIALLQERFRQLQK+KQRRE+KELLNLL ESNRVDASIMHL+ NGSSTSRDLDSNSLSLGLNL+ NAGK+VDID+HEAR MPGDTKF
Subjt:  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVDASIMHLQSNGSSTSRDLDSNSLSLGLNLQ-NAGKEVDIDVHEARLMPGDTKF

Query:  WSGNSVM
          GNS M
Subjt:  WSGNSVM

KAG6572236.1 hypothetical protein SDJN03_28964, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2561.72Show/hide
Query:  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVDASIMHLQSNGSSTSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLMPGDTKFW
        M RHSSEP +VGTSIALLQERFRQLQK+K RREKKE++ LLS+SN +            STSRDL  NSLSLGLNL NAGK+V  D HE RLMPGDTK  
Subjt:  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVDASIMHLQSNGSSTSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLMPGDTKFW

Query:  SGNSVMTSVLRSFDSP----DVDTTLHL
            ++    RS+D+P    DVDTTLHL
Subjt:  SGNSVMTSVLRSFDSP----DVDTTLHL

KAG6589104.1 hypothetical protein SDJN03_17669, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2677.66Show/hide
Query:  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVD-ASIMHLQSNGSSTSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLM
        MGRHSSE TM+GTSIALLQERFRQLQKDKQRREKKELL+LLS+SNRV+ +SIMHL+SN SS SRDL+ +SLSLGLN  +AGK+VDI  HEAR +
Subjt:  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVD-ASIMHLQSNGSSTSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLM

XP_023916992.1 uncharacterized protein LOC112028527 [Quercus suber]5.3e-1746.92Show/hide
Query:  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRV------DASIMHLQSNGSSTSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLMP
        MGR S++PTMV +SIALLQERFRQL+K K+RRE+KELLNL +E+ R+      + S +  Q   ++ +R    +S SL LNLQ   K+ D+   +A   P
Subjt:  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRV------DASIMHLQSNGSSTSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLMP

Query:  GDTKFWSGNSVMTSVLRSFDSPDVDTTLHL
          T  W  ++ M S  RSF++ DVDT+LHL
Subjt:  GDTKFWSGNSVMTSVLRSFDSPDVDTTLHL

TrEMBL top hitse value%identityAlignment
A0A0A0K617 Uncharacterized protein9.6e-4985.6Show/hide
Query:  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVDASIMHLQSNGSSTSRDLDSNSLSLGLNLQ-NAGKEVDIDVHEARLMPGDTKF
        MGRH+SEPTMVGTSIALLQERFRQLQK+KQRRE+KELLNLL ESNRVDASIMHL+ NGSSTSRDLDSNSLSLGLNL+ NAGK+VDID+HEAR MPGDTKF
Subjt:  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVDASIMHLQSNGSSTSRDLDSNSLSLGLNLQ-NAGKEVDIDVHEARLMPGDTKF

Query:  WSGNSVMTSVLRSFDSPDVDTTLHL
          GNS M S  RSFDSP+VDTTLHL
Subjt:  WSGNSVMTSVLRSFDSPDVDTTLHL

A0A2N9FNY6 Uncharacterized protein2.2e-1646.92Show/hide
Query:  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRV------DASIMHLQSNGSSTSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLMP
        MGR S++PTMV +SIALLQERFRQL+K K+RRE+KELL L +E+ R+      + S +  Q    +  R    +S SLGLNLQ   K+ D    +A  MP
Subjt:  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRV------DASIMHLQSNGSSTSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLMP

Query:  GDTKFWSGNSVMTSVLRSFDSPDVDTTLHL
             W   + M S  RSF++ DVDT+LHL
Subjt:  GDTKFWSGNSVMTSVLRSFDSPDVDTTLHL

A0A5D3E685 Uncharacterized protein1.1e-3977.17Show/hide
Query:  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVDASIMHL--QSNGSSTSRDLDSNSLSLGLNLQ-NAGKEVDIDVHEARLMPGDT
        MGRH SEPTMVGTSIALLQERFRQLQK+KQ+RE+KELLNLL ESNRVDASIMHL  + NGS T R LDSNSLSLGLNL+ N GK+VDID+HEAR +P DT
Subjt:  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVDASIMHL--QSNGSSTSRDLDSNSLSLGLNLQ-NAGKEVDIDVHEARLMPGDT

Query:  KFWSGNSVMTSVLRSFDSPDVDTTLHL
        KF   NS M S LRSFD+ +VDTTLHL
Subjt:  KFWSGNSVMTSVLRSFDSPDVDTTLHL

A0A6J5UK47 Uncharacterized protein2.4e-1549.62Show/hide
Query:  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESN----RVDASIMHLQSNGSSTSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLMPGD
        MGR SS+PT+V +SIALLQERFRQLQK K+RRE+++LL +LSE++    RV  SI H +S+ +  S   D +SLSLGLNLQ   ++VD   H A      
Subjt:  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESN----RVDASIMHLQSNGSSTSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLMPGD

Query:  TKFWSGNSVMTSVL---RSFDSPDVDTTLHL
        T  W  N+   S     +SFD+ D+DT+LHL
Subjt:  TKFWSGNSVMTSVL---RSFDSPDVDTTLHL

A0A7N2M9I5 Uncharacterized protein3.1e-1545.38Show/hide
Query:  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRV------DASIMHLQSNGSSTSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLMP
        M R S++ TMV +SIALLQERFRQL+K K+RRE+KELLNL +E+ R+      + S +  Q   ++ +R    +S SL LNLQ   K+ D+   +A   P
Subjt:  MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRV------DASIMHLQSNGSSTSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLMP

Query:  GDTKFWSGNSVMTSVLRSFDSPDVDTTLHL
          T  W   + M S  RSF++ DVDT+LHL
Subjt:  GDTKFWSGNSVMTSVLRSFDSPDVDTTLHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGGCACAGTAGTGAACCCACCATGGTTGGTACCTCCATAGCTCTGTTACAAGAAAGGTTCAGACAGTTGCAGAAAGACAAGCAAAGGAGAGAGAAGAAGGAGCT
TCTTAACCTACTATCCGAATCAAATAGGGTTGATGCCTCGATAATGCATTTACAATCCAACGGCTCGTCAACCTCAAGAGATTTGGACTCCAATTCCCTCTCCCTTGGCC
TGAACTTGCAGAATGCAGGTAAGGAAGTTGATATTGATGTCCATGAAGCCAGGTTGATGCCTGGCGACACAAAGTTCTGGTCTGGAAACTCAGTCATGACAAGCGTGTTA
AGAAGTTTCGATAGTCCAGATGTCGATACCACTCTTCATCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGGCACAGTAGTGAACCCACCATGGTTGGTACCTCCATAGCTCTGTTACAAGAAAGGTTCAGACAGTTGCAGAAAGACAAGCAAAGGAGAGAGAAGAAGGAGCT
TCTTAACCTACTATCCGAATCAAATAGGGTTGATGCCTCGATAATGCATTTACAATCCAACGGCTCGTCAACCTCAAGAGATTTGGACTCCAATTCCCTCTCCCTTGGCC
TGAACTTGCAGAATGCAGGTAAGGAAGTTGATATTGATGTCCATGAAGCCAGGTTGATGCCTGGCGACACAAAGTTCTGGTCTGGAAACTCAGTCATGACAAGCGTGTTA
AGAAGTTTCGATAGTCCAGATGTCGATACCACTCTTCATCTATAG
Protein sequenceShow/hide protein sequence
MGRHSSEPTMVGTSIALLQERFRQLQKDKQRREKKELLNLLSESNRVDASIMHLQSNGSSTSRDLDSNSLSLGLNLQNAGKEVDIDVHEARLMPGDTKFWSGNSVMTSVL
RSFDSPDVDTTLHL