; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10005527 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005527
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationChr07:3350432..3351520
RNA-Seq ExpressionHG10005527
SyntenyHG10005527
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011839.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-17386.54Show/hide
Query:  MGA--FQFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPED
        MGA   Q QSRLRVSKILSSTIR WER FPLL DPLRTPD SLSP +SRCFSSNSMDDDW FSKS+PR+SPPQ+RSP D REARRVPKF G+VS+PYPED
Subjt:  MGA--FQFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPED

Query:  NRNQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPEADEIFKKMKETGLIPNAVTM
        NRNQRFNRHSEGSSSRFANEG +SR R+ESLSQKDFSFLEKFKLNTDNQS+S EK E  SSAQ SESMQ KQSQPQ PPEADEIF+KMKETGLIPNAV M
Subjt:  NRNQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPEADEIFKKMKETGLIPNAVTM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAEK DEAIRIFRKMQNNGI PNAFS+G+LIQGLYK K++EDAV+FC EMLESGHSPNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLT

Query:  TFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKEFF
        TFVGLID LC EKGVDEAH+V+ETLKQKGFLINEK LREFLNKRAPFSPHIWE+IFGKKTKEFF
Subjt:  TFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKEFF

XP_022952706.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata]1.5e-17386.26Show/hide
Query:  MGA--FQFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPED
        MGA   Q QSRLRVSKILSSTIR WER FPLL DPLRTPD SLSP +SRCFSSNSMDDDW FS+S+PR+SPPQ+RSP D REARRVPKF G+VS+PYPED
Subjt:  MGA--FQFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPED

Query:  NRNQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPEADEIFKKMKETGLIPNAVTM
        NRNQRFNRHSEGSSSRFAN+G +SR R+ESLSQKDFSFLEKFKLNTDNQS+S EK E  SSAQ+SESMQ KQSQPQ PPEADEIF+KMKETGLIPNAV M
Subjt:  NRNQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPEADEIFKKMKETGLIPNAVTM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAEKLDEAIRIFRKMQNNGI PNAFS+G+LIQGLYK K++EDAV+FCIEMLESGHSPNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLT

Query:  TFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKEFF
        TFVGLID LC EKGVDEAH+V+ETLKQKGFLINEK LR+FLNKRAPFSPHIWE+IFGKKTKEFF
Subjt:  TFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKEFF

XP_022969144.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima]5.2e-17486.81Show/hide
Query:  MGA--FQFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPED
        MGA   Q QSRLRVSKIL STIR WER FPLL DPLRTPD SLSP +SRCFSSNSMDDDW FS+S+PR+SPPQ+RSP D REARRVPKF G+VS+PYPED
Subjt:  MGA--FQFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPED

Query:  NRNQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPEADEIFKKMKETGLIPNAVTM
        NRNQRFNRH EGS SRFANEG +SR+RSESLSQKDFSFLEKFKLNTDN S+S EKTE  SSAQ SESMQ KQSQPQ PPEADEIF+KMKETGLIPNAV M
Subjt:  NRNQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPEADEIFKKMKETGLIPNAVTM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAE LDEAIRIFRKMQNNGI PNAFS+GVLIQGLYKCK++EDAV+FCIEMLESGHSPNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLT

Query:  TFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKEFF
        TFVGLID LC EKGVDEAH+V+ETLKQKGFLINEKALREFLNKRAPFSPHIWE+IFGKKTKEFF
Subjt:  TFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKEFF

XP_023554525.1 pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita pepo subsp. pepo]5.8e-17386.26Show/hide
Query:  MGA--FQFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPED
        MGA   Q QSRLRVSKILSSTIR WER FPLL DPLRTPD SLSP +SRCFSSNSMDDDW FS+S+PR+SPPQ+RSP D REARRVPKF G+ S+PYPED
Subjt:  MGA--FQFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPED

Query:  NRNQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPEADEIFKKMKETGLIPNAVTM
        NRNQRFNRHSEGSSSRFANEG +SR+R+ESLSQKDFSFLEKFKLNTDNQS+S EK E  SSAQ SESMQ +QSQPQ PPEADEIF+KMKETGLIPNAV M
Subjt:  NRNQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPEADEIFKKMKETGLIPNAVTM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAEKLDEAIRIFRKMQNNGI PNAFS+G+LIQGLYK K++EDAV+FCIEMLESGHSPNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLT

Query:  TFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKEFF
        TFVGLID LC EKG DEAH+V+ETLKQKGFLINEKALREFLNKRAPFSPHIWE+IFGKKTKEFF
Subjt:  TFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKEFF

XP_038888880.1 pentatricopeptide repeat-containing protein At4g38150 isoform X1 [Benincasa hispida]2.3e-17789.78Show/hide
Query:  AFQFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRS-PLDHREARRVPKFTGDVSSPYPEDNRN
        AFQFQSRLRV KILSSTIRKWERDFPLL D LR P+FSLSPAQSRCF+SNS+DDDWAFSKS+PRTSPPQ+RS P DHREARRVP F  +VS+P+P+DNRN
Subjt:  AFQFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRS-PLDHREARRVPKFTGDVSSPYPEDNRN

Query:  QRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPEADEIFKKMKETGLIPNAVTMLDG
        QRFNR SEGSSSRFANE SISRQR+ESL+QKDFSFLE+FKLNTDNQSSS EKTEE SSA+LSESMQEKQSQPQRPPEADEIF+KMKETGLIPNAV MLDG
Subjt:  QRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPEADEIFKKMKETGLIPNAVTMLDG

Query:  LCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLTTFV
        LCKDGLIQEAMKLF LIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCK++EDAVAFCIEMLESGHSPNL TFV
Subjt:  LCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLTTFV

Query:  GLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKT-KEFF
        GLID LCNEKGVDEAHSVVETLKQKGFLINEKALRE LNKRAPFSPHIWEV+FGKK  KEFF
Subjt:  GLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKT-KEFF

TrEMBL top hitse value%identityAlignment
A0A0A0K6C0 Uncharacterized protein2.1e-16084.07Show/hide
Query:  MGAFQFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPEDNR
        MGAFQ QSRL+VSKILSSTIRKWE DFPLL +PLRTPDFSL PAQSR F+SNSMDDD AFS S+P  +PPQ+R P DHREARRVP+  G V++ Y  DNR
Subjt:  MGAFQFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPEDNR

Query:  NQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEE-ISSAQLSESMQEK-QSQPQRPPEADEIFKKMKETGLIPNAVTM
        NQRFNRHSEGSSSRF NEGS S QRSESLSQKDFSFLEKFKLNTDNQSS KEKTEE  SSA +SESM EK QS+PQRPPEADEIF KMKETGLIPNAV M
Subjt:  NQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEE-ISSAQLSESMQEK-QSQPQRPPEADEIFKKMKETGLIPNAVTM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEK DEAIRIFRKMQ+NGIPPNAFSFGVLIQGLYKCK+++DAVAFC EMLESGH PNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLT

Query:  TFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKEFF
        TFVGLID LCNEKGVDEAHSVVET KQKGFLI+EKALRE LNKRAPFSP IW+V FG +   FF
Subjt:  TFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKEFF

A0A1S3CFW0 pentatricopeptide repeat-containing protein At4g381505.1e-15983.52Show/hide
Query:  MGAFQFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPEDNR
        M AFQFQSRL+VSKILSS+IRKWE DFPLL +PLRTPDFSLSPA SR FSSNSMDDD AFS+S+PR +PPQ+R P DHREARRVP+  G V+  Y  DNR
Subjt:  MGAFQFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPEDNR

Query:  NQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEE-ISSAQLSESMQEK-QSQPQRPPEADEIFKKMKETGLIPNAVTM
        NQRFNRHSEGSSSRF NEGS SRQRSESLSQKDFSFLEKFKLNTDNQSS  EKTEE  SSA +SESMQEK QSQ QRPP ADEIF+KMKE+GLIPNAV M
Subjt:  NQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEE-ISSAQLSESMQEK-QSQPQRPPEADEIFKKMKETGLIPNAVTM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLT
        LDGLCKDGLIQEAMKLF LIREKGTIPEVVIYTAVVDGFCKAEK DEAIRIFRKMQN GI PNAFSFGVLIQGLYKCK+++DAVAFC EMLESGH PNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLT

Query:  TFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKEFF
        TFVGLID LC+EKGVDEAH+VVET KQKGFLI+EKALREFLNKRAPFSP IW+V FG K   FF
Subjt:  TFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKEFF

A0A6J1C2J3 pentatricopeptide repeat-containing protein At4g381501.3e-15981.28Show/hide
Query:  QFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPEDNRNQRF
        Q QSRLR+SKI+SS+I K ER  PLL D LRT DFSL P QSRCFSSNSMDDDWA S S+PR++PP +RSP D RE RRVPKF+  VS+ YP D+RN+R 
Subjt:  QFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPEDNRNQRF

Query:  NRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPEADEIFKKMKETGLIPNAVTMLDGLCK
        N+ SEGSS RF NEG ISRQRSE LSQKDFSFLEKFKLNTDNQSSSKEKTE+ S+ + SES+QEKQSQPQRPPEADEIFKKMKETGLIPNAV MLDGLCK
Subjt:  NRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPEADEIFKKMKETGLIPNAVTMLDGLCK

Query:  DGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLTTFVGLI
        DGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQ NGI PNAFSFGVLIQGLYKC ++E+A+ FCIEMLESGHSPN+TT VGL+
Subjt:  DGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLTTFVGLI

Query:  DGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKEFF
        D LC E+G +EA SV+ETLKQKGFL+NEKALREFLNKRAPFSP+IWE IFGKKTKEFF
Subjt:  DGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKEFF

A0A6J1GKZ0 pentatricopeptide repeat-containing protein At4g38150-like7.3e-17486.26Show/hide
Query:  MGA--FQFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPED
        MGA   Q QSRLRVSKILSSTIR WER FPLL DPLRTPD SLSP +SRCFSSNSMDDDW FS+S+PR+SPPQ+RSP D REARRVPKF G+VS+PYPED
Subjt:  MGA--FQFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPED

Query:  NRNQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPEADEIFKKMKETGLIPNAVTM
        NRNQRFNRHSEGSSSRFAN+G +SR R+ESLSQKDFSFLEKFKLNTDNQS+S EK E  SSAQ+SESMQ KQSQPQ PPEADEIF+KMKETGLIPNAV M
Subjt:  NRNQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPEADEIFKKMKETGLIPNAVTM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAEKLDEAIRIFRKMQNNGI PNAFS+G+LIQGLYK K++EDAV+FCIEMLESGHSPNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLT

Query:  TFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKEFF
        TFVGLID LC EKGVDEAH+V+ETLKQKGFLINEK LR+FLNKRAPFSPHIWE+IFGKKTKEFF
Subjt:  TFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKEFF

A0A6J1I1Q2 pentatricopeptide repeat-containing protein At4g38150-like2.5e-17486.81Show/hide
Query:  MGA--FQFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPED
        MGA   Q QSRLRVSKIL STIR WER FPLL DPLRTPD SLSP +SRCFSSNSMDDDW FS+S+PR+SPPQ+RSP D REARRVPKF G+VS+PYPED
Subjt:  MGA--FQFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPED

Query:  NRNQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPEADEIFKKMKETGLIPNAVTM
        NRNQRFNRH EGS SRFANEG +SR+RSESLSQKDFSFLEKFKLNTDN S+S EKTE  SSAQ SESMQ KQSQPQ PPEADEIF+KMKETGLIPNAV M
Subjt:  NRNQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPEADEIFKKMKETGLIPNAVTM

Query:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLT
        LDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVVDGFCKAE LDEAIRIFRKMQNNGI PNAFS+GVLIQGLYKCK++EDAV+FCIEMLESGHSPNLT
Subjt:  LDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLT

Query:  TFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKEFF
        TFVGLID LC EKGVDEAH+V+ETLKQKGFLINEKALREFLNKRAPFSPHIWE+IFGKKTKEFF
Subjt:  TFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKEFF

SwissProt top hitse value%identityAlignment
Q0WVK7 Pentatricopeptide repeat-containing protein At1g05670, mitochondrial4.6e-2435.67Show/hide
Query:  EADEIFKKMKETGLIPNAV---TMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYK
        EA+E F +M   G++P+ V   T++DG CK G I+ A K F  +  +   P+V+ YTA++ GFC+   + EA ++F +M   G+ P++ +F  LI G  K
Subjt:  EADEIFKKMKETGLIPNAV---TMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYK

Query:  CKRIEDAVAFCIEMLESGHSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLIN
           ++DA      M+++G SPN+ T+  LIDGLC E  +D A+ ++  + + G   N
Subjt:  CKRIEDAVAFCIEMLESGHSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLIN

Q6NQ83 Pentatricopeptide repeat-containing protein At3g22470, mitochondrial1.1e-2229.8Show/hide
Query:  EADEIFKKMKETGLIPNAVT---MLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYK
        EA E++ +M   G+ P+ +T   ++DG CK+  + EA ++F L+  KG  P++V Y+ +++ +CKA+++D+ +R+FR++ + G+ PN  ++  L+ G  +
Subjt:  EADEIFKKMKETGLIPNAVT---MLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYK

Query:  CKRIEDAVAFCIEMLESGHSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQ
          ++  A     EM+  G  P++ T+  L+DGLC+   +++A  + E +++
Subjt:  CKRIEDAVAFCIEMLESGHSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQ

Q9FNL2 Pentatricopeptide repeat-containing protein At5g461005.1e-2336.67Show/hide
Query:  EIFKKMKETGLIPNAV---TMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKR
        +IF +M + G  P++    T++ GLC+ G I EA KLF  + EK   P VV YT++++G C ++ +DEA+R   +M++ GI PN F++  L+ GL K  R
Subjt:  EIFKKMKETGLIPNAV---TMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKR

Query:  IEDAVAFCIEMLESGHSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKG
           A+     M+  G  PN+ T+  LI GLC E+ + EA  +++ +  +G
Subjt:  IEDAVAFCIEMLESGHSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKG

Q9M9X9 Pentatricopeptide repeat-containing protein At1g06710, mitochondrial6.0e-2435.06Show/hide
Query:  PEADEIFKKMKETGLIPNAVT---MLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLY
        P+ D  FK+  +    PN VT   +LDG CK   ++EA KL   +  +G  P  ++Y A++DG CK  KLDEA  +  +M  +G P   +++  LI   +
Subjt:  PEADEIFKKMKETGLIPNAVT---MLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLY

Query:  KCKRIEDAVAFCIEMLESGHSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKG
        K KR + A     +MLE+  +PN+  +  +IDGLC     DEA+ +++ +++KG
Subjt:  KCKRIEDAVAFCIEMLESGHSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKG

Q9SZL5 Pentatricopeptide repeat-containing protein At4g381501.8e-7657.84Show/hide
Query:  PYPEDNRNQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPE-ADEIFKKMKETGLI
        P P  NR  R  R S       A +     +   +LS  D  FLE+FKL  +  S    K E+               +P  PPE +DEIFKKMKE GLI
Subjt:  PYPEDNRNQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPE-ADEIFKKMKETGLI

Query:  PNAVTMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESG
        PNAV MLDGLCKDGL+QEAMKLFGL+R+KGTIPEVVIYTAVV+ FCKA K+++A RIFRKMQNNGI PNAFS+GVL+QGLY C  ++DAVAFC EMLESG
Subjt:  PNAVTMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESG

Query:  HSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKE
        HSPN+ TFV L+D LC  KGV++A S ++TL QKGF +N KA++EF++KRAPF    WE IF KK  E
Subjt:  HSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKE

Arabidopsis top hitse value%identityAlignment
AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein3.3e-2535.67Show/hide
Query:  EADEIFKKMKETGLIPNAV---TMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYK
        EA+E F +M   G++P+ V   T++DG CK G I+ A K F  +  +   P+V+ YTA++ GFC+   + EA ++F +M   G+ P++ +F  LI G  K
Subjt:  EADEIFKKMKETGLIPNAV---TMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYK

Query:  CKRIEDAVAFCIEMLESGHSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLIN
           ++DA      M+++G SPN+ T+  LIDGLC E  +D A+ ++  + + G   N
Subjt:  CKRIEDAVAFCIEMLESGHSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLIN

AT1G05670.2 Pentatricopeptide repeat (PPR-like) superfamily protein3.3e-2535.67Show/hide
Query:  EADEIFKKMKETGLIPNAV---TMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYK
        EA+E F +M   G++P+ V   T++DG CK G I+ A K F  +  +   P+V+ YTA++ GFC+   + EA ++F +M   G+ P++ +F  LI G  K
Subjt:  EADEIFKKMKETGLIPNAV---TMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYK

Query:  CKRIEDAVAFCIEMLESGHSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLIN
           ++DA      M+++G SPN+ T+  LIDGLC E  +D A+ ++  + + G   N
Subjt:  CKRIEDAVAFCIEMLESGHSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLIN

AT4G38150.1 Pentatricopeptide repeat (PPR) superfamily protein1.3e-7757.84Show/hide
Query:  PYPEDNRNQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPE-ADEIFKKMKETGLI
        P P  NR  R  R S       A +     +   +LS  D  FLE+FKL  +  S    K E+               +P  PPE +DEIFKKMKE GLI
Subjt:  PYPEDNRNQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPE-ADEIFKKMKETGLI

Query:  PNAVTMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESG
        PNAV MLDGLCKDGL+QEAMKLFGL+R+KGTIPEVVIYTAVV+ FCKA K+++A RIFRKMQNNGI PNAFS+GVL+QGLY C  ++DAVAFC EMLESG
Subjt:  PNAVTMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESG

Query:  HSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKE
        HSPN+ TFV L+D LC  KGV++A S ++TL QKGF +N KA++EF++KRAPF    WE IF KK  E
Subjt:  HSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKE

AT4G38150.2 Pentatricopeptide repeat (PPR) superfamily protein1.3e-7757.84Show/hide
Query:  PYPEDNRNQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPE-ADEIFKKMKETGLI
        P P  NR  R  R S       A +     +   +LS  D  FLE+FKL  +  S    K E+               +P  PPE +DEIFKKMKE GLI
Subjt:  PYPEDNRNQRFNRHSEGSSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPE-ADEIFKKMKETGLI

Query:  PNAVTMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESG
        PNAV MLDGLCKDGL+QEAMKLFGL+R+KGTIPEVVIYTAVV+ FCKA K+++A RIFRKMQNNGI PNAFS+GVL+QGLY C  ++DAVAFC EMLESG
Subjt:  PNAVTMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESG

Query:  HSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKE
        HSPN+ TFV L+D LC  KGV++A S ++TL QKGF +N KA++EF++KRAPF    WE IF KK  E
Subjt:  HSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINEKALREFLNKRAPFSPHIWEVIFGKKTKE

AT5G03560.2 Tetratricopeptide repeat (TPR)-like superfamily protein1.2e-2729.54Show/hide
Query:  NSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPEDNRNQRFNRHSEGSSSRFA--NEGSISRQRSESLSQKDFSFLEKFKLNTD-NQS
        +S DD  A SK + + +  +  + +D    R++P          PE    + F R    S+S F     G  +RQ S           E  ++NT  N S
Subjt:  NSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPEDNRNQRFNRHSEGSSSRFA--NEGSISRQRSESLSQKDFSFLEKFKLNTD-NQS

Query:  SSKEKTEEISSAQLSESMQEKQ---------------SQPQRPPEADEIFKKMKETGLIPNAVTMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAV
         S + ++E +  Q++E  ++++                +P+ P    EIF KM+  G    AV M D L KDG   EA++LF  I++K  +P+VV +TA+
Subjt:  SSKEKTEEISSAQLSESMQEKQ---------------SQPQRPPEADEIFKKMKETGLIPNAVTMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAV

Query:  VDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGL-YKCKRIEDAVAFCIEMLESGHSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINE
        V+ +  A +  E +++F +M  +G+ PNA+++ VLI+GL    K  +DA  + +EM+ +G SPN  T+  + +    E   + A  +++ +K KGF+ +E
Subjt:  VDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGL-YKCKRIEDAVAFCIEMLESGHSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLINE

Query:  KALREFLN-KRAPFSPHIWEVIFGK
        KA+RE L  KR      +  ++F K
Subjt:  KALREFLN-KRAPFSPHIWEVIFGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCGTTTCAATTTCAATCTCGTCTTCGTGTTTCGAAGATTTTGTCTTCAACAATTCGGAAATGGGAAAGAGACTTTCCTCTGCTTCTTGATCCATTGCGAACGCC
GGATTTCTCACTCTCGCCGGCGCAATCTCGCTGTTTTAGCTCCAATTCCATGGATGACGATTGGGCTTTCTCAAAGTCCCAGCCGAGAACCAGCCCGCCGCAACAGCGTT
CTCCTCTGGATCATCGTGAAGCTCGTCGAGTTCCCAAATTCACTGGGGATGTATCTTCTCCGTACCCTGAGGATAATCGGAACCAACGCTTTAATAGACATTCGGAAGGT
TCCTCGTCTCGATTCGCAAATGAAGGGTCGATTTCGCGGCAAAGAAGTGAGTCTTTGTCTCAGAAGGATTTTAGCTTTCTTGAAAAATTCAAACTGAACACTGATAATCA
GAGTAGTAGTAAAGAGAAGACTGAGGAGATCTCTTCTGCTCAGCTTTCTGAATCAATGCAGGAGAAGCAGTCACAACCGCAGCGTCCTCCAGAAGCCGATGAGATATTCA
AGAAAATGAAGGAGACTGGTCTAATTCCCAACGCTGTCACTATGCTTGATGGGCTTTGTAAAGATGGACTTATTCAAGAAGCAATGAAACTATTTGGTTTGATCCGTGAG
AAGGGTACAATTCCAGAAGTTGTGATTTACACTGCTGTCGTTGATGGGTTTTGCAAGGCGGAGAAGCTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAATAATGG
TATTCCTCCCAATGCCTTCAGTTTCGGCGTCTTGATACAGGGACTGTACAAATGCAAAAGAATAGAGGATGCTGTAGCATTTTGCATTGAGATGTTAGAATCTGGGCATT
CTCCAAATCTTACCACTTTTGTTGGCCTAATTGATGGGTTATGCAATGAAAAGGGCGTGGACGAAGCTCATAGTGTCGTAGAAACCTTGAAACAGAAGGGATTCTTGATT
AATGAGAAAGCTTTAAGAGAATTTTTGAATAAAAGAGCCCCATTTTCACCACATATCTGGGAAGTGATCTTTGGGAAGAAAACAAAGGAATTTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCGTTTCAATTTCAATCTCGTCTTCGTGTTTCGAAGATTTTGTCTTCAACAATTCGGAAATGGGAAAGAGACTTTCCTCTGCTTCTTGATCCATTGCGAACGCC
GGATTTCTCACTCTCGCCGGCGCAATCTCGCTGTTTTAGCTCCAATTCCATGGATGACGATTGGGCTTTCTCAAAGTCCCAGCCGAGAACCAGCCCGCCGCAACAGCGTT
CTCCTCTGGATCATCGTGAAGCTCGTCGAGTTCCCAAATTCACTGGGGATGTATCTTCTCCGTACCCTGAGGATAATCGGAACCAACGCTTTAATAGACATTCGGAAGGT
TCCTCGTCTCGATTCGCAAATGAAGGGTCGATTTCGCGGCAAAGAAGTGAGTCTTTGTCTCAGAAGGATTTTAGCTTTCTTGAAAAATTCAAACTGAACACTGATAATCA
GAGTAGTAGTAAAGAGAAGACTGAGGAGATCTCTTCTGCTCAGCTTTCTGAATCAATGCAGGAGAAGCAGTCACAACCGCAGCGTCCTCCAGAAGCCGATGAGATATTCA
AGAAAATGAAGGAGACTGGTCTAATTCCCAACGCTGTCACTATGCTTGATGGGCTTTGTAAAGATGGACTTATTCAAGAAGCAATGAAACTATTTGGTTTGATCCGTGAG
AAGGGTACAATTCCAGAAGTTGTGATTTACACTGCTGTCGTTGATGGGTTTTGCAAGGCGGAGAAGCTTGATGAAGCAATTAGGATTTTCAGGAAAATGCAGAATAATGG
TATTCCTCCCAATGCCTTCAGTTTCGGCGTCTTGATACAGGGACTGTACAAATGCAAAAGAATAGAGGATGCTGTAGCATTTTGCATTGAGATGTTAGAATCTGGGCATT
CTCCAAATCTTACCACTTTTGTTGGCCTAATTGATGGGTTATGCAATGAAAAGGGCGTGGACGAAGCTCATAGTGTCGTAGAAACCTTGAAACAGAAGGGATTCTTGATT
AATGAGAAAGCTTTAAGAGAATTTTTGAATAAAAGAGCCCCATTTTCACCACATATCTGGGAAGTGATCTTTGGGAAGAAAACAAAGGAATTTTTCTGA
Protein sequenceShow/hide protein sequence
MGAFQFQSRLRVSKILSSTIRKWERDFPLLLDPLRTPDFSLSPAQSRCFSSNSMDDDWAFSKSQPRTSPPQQRSPLDHREARRVPKFTGDVSSPYPEDNRNQRFNRHSEG
SSSRFANEGSISRQRSESLSQKDFSFLEKFKLNTDNQSSSKEKTEEISSAQLSESMQEKQSQPQRPPEADEIFKKMKETGLIPNAVTMLDGLCKDGLIQEAMKLFGLIRE
KGTIPEVVIYTAVVDGFCKAEKLDEAIRIFRKMQNNGIPPNAFSFGVLIQGLYKCKRIEDAVAFCIEMLESGHSPNLTTFVGLIDGLCNEKGVDEAHSVVETLKQKGFLI
NEKALREFLNKRAPFSPHIWEVIFGKKTKEFF