; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10005541 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005541
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTubulin-tyrosine ligase
Genome locationChr07:3469999..3475131
RNA-Seq ExpressionHG10005541
SyntenyHG10005541
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011827.1 hypothetical protein SDJN02_26733, partial [Cucurbita argyrosperma subsp. argyrosperma]6.4e-9787.68Show/hide
Query:  MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL
        MEDCLRESMRKLA+W TKTFKPIMTHDELEPIM TLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSP PP PRLPYPRIDGLHIYTYRAFLDAVNFYL
Subjt:  MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL

Query:  EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRND--STTSDEEHDDRGKMIEDGTDEDSMCIVSLKD
        EKFDISDLFHIRGLPLYRNHDRNRKWRR+DEEGGNFVYREGTLDQTTLNLYNFHK  PNNKRYK+N+  S+TSDEE+DD  K I     ED +C+VSLKD
Subjt:  EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRND--STTSDEEHDDRGKMIEDGTDEDSMCIVSLKD

Query:  VIT
        VIT
Subjt:  VIT

XP_004144902.1 uncharacterized protein LOC101221709 [Cucumis sativus]2.3e-10292.08Show/hide
Query:  MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL
        MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL
Subjt:  MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL

Query:  EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK-NCPNNKRYKRNDSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKDV
        EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTL+LYNFHK N  NNKRYK+ DS T+DEE++DR +M ED T+EDS+CIVSLKDV
Subjt:  EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK-NCPNNKRYKRNDSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKDV

Query:  IT
        IT
Subjt:  IT

XP_008451192.1 PREDICTED: uncharacterized protein LOC103492564 [Cucumis melo]2.1e-10091.13Show/hide
Query:  MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL
        MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKY+AADCRT SVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL
Subjt:  MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL

Query:  EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK-NCPNNKRYKRNDSTTSDEE-HDDRGKMIEDGTDEDSMCIVSLKD
        EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYN HK N   NKRYK+ +S T DEE ++DRGKMI+D TDEDS+CIVSLKD
Subjt:  EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK-NCPNNKRYKRNDSTTSDEE-HDDRGKMIEDGTDEDSMCIVSLKD

Query:  VIT
        VIT
Subjt:  VIT

XP_022952714.1 uncharacterized protein LOC111455327 [Cucurbita moschata]3.7e-9788.18Show/hide
Query:  MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL
        MEDCLRESMRKLA+W TKTFKPIMTHDELEPIM TLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSP PP PRLPYPRIDGLHIYTYRAFLDAVNFYL
Subjt:  MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL

Query:  EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRN--DSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKD
        EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK  PNNKRYK+N   S+TSDEE+DD  K I     ED +C+VSLKD
Subjt:  EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRN--DSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKD

Query:  VIT
        VIT
Subjt:  VIT

XP_038887596.1 uncharacterized protein LOC120077705 [Benincasa hispida]4.0e-10794.53Show/hide
Query:  MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL
        MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL
Subjt:  MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL

Query:  EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRNDSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKDVI
        EKFDISDLFHIRGLPLYRNHDRNRKWRR+DEEGGNFVYREGTLDQTTLNLYNFHKNC N KR+++NDST SDEE+DDRGK+IED TDEDS+CIVSLKDVI
Subjt:  EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRNDSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKDVI

Query:  T
        T
Subjt:  T

TrEMBL top hitse value%identityAlignment
A0A0A0K4Z6 Uncharacterized protein1.1e-10292.08Show/hide
Query:  MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL
        MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL
Subjt:  MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL

Query:  EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK-NCPNNKRYKRNDSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKDV
        EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTL+LYNFHK N  NNKRYK+ DS T+DEE++DR +M ED T+EDS+CIVSLKDV
Subjt:  EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK-NCPNNKRYKRNDSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKDV

Query:  IT
        IT
Subjt:  IT

A0A1S3BQB8 uncharacterized protein LOC1034925641.0e-10091.13Show/hide
Query:  MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL
        MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKY+AADCRT SVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL
Subjt:  MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL

Query:  EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK-NCPNNKRYKRNDSTTSDEE-HDDRGKMIEDGTDEDSMCIVSLKD
        EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYN HK N   NKRYK+ +S T DEE ++DRGKMI+D TDEDS+CIVSLKD
Subjt:  EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK-NCPNNKRYKRNDSTTSDEE-HDDRGKMIEDGTDEDSMCIVSLKD

Query:  VIT
        VIT
Subjt:  VIT

A0A6J1C2J2 uncharacterized protein LOC1110076741.2e-8880.1Show/hide
Query:  MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSV---SPSPPTPRLPYPRIDGLHIYTYRAFLDAVN
        MEDCLRESMRKLAVW+TKTFKPIMTH+ELEPIMATLGF+ LEPAVNGAGISWKSYKYSAADCR+KSV   + +PPTPRLP+PRIDGLHIYTYRAFLDAVN
Subjt:  MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSV---SPSPPTPRLPYPRIDGLHIYTYRAFLDAVN

Query:  FYLEKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKN--CPNNKRYKRNDSTTSDEEHDDRGKMIEDGTDEDSMCIVS
        FYLEKFDISDLFHIRGLPLYRN DRNRKWRRMDEEGGNFVYREGTLDQTTLN YNFHKN    N+    +  S    E+ D    MIED T+ED +CIVS
Subjt:  FYLEKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKN--CPNNKRYKRNDSTTSDEEHDDRGKMIEDGTDEDSMCIVS

Query:  LKDVIT
        LKD+IT
Subjt:  LKDVIT

A0A6J1GMI7 uncharacterized protein LOC1114553271.8e-9788.18Show/hide
Query:  MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL
        MEDCLRESMRKLA+W TKTFKPIMTHDELEPIM TLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSP PP PRLPYPRIDGLHIYTYRAFLDAVNFYL
Subjt:  MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL

Query:  EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRN--DSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKD
        EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK  PNNKRYK+N   S+TSDEE+DD  K I     ED +C+VSLKD
Subjt:  EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRN--DSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKD

Query:  VIT
        VIT
Subjt:  VIT

A0A6J1I0G9 uncharacterized protein LOC1114683184.5e-9687.68Show/hide
Query:  MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL
        MEDCLRESMRKLA+W TKTFKPIMTHDELEPIM TLGFIALEPAVNGAGISWKSYKYSAAD RTKSVSP PP PRLPYPRIDGLHIYTYRAFLDAVNFYL
Subjt:  MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYL

Query:  EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRND--STTSDEEHDDRGKMIEDGTDEDSMCIVSLKD
        EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHK  PNNKRYK+N+  S+TSDEE+DD  K I     E+ +CIVSLKD
Subjt:  EKFDISDLFHIRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRND--STTSDEEHDDRGKMIEDGTDEDSMCIVSLKD

Query:  VIT
        VIT
Subjt:  VIT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGACTGCCTCAGGGAGTCCATGCGCAAGTTAGCCGTCTGGTTCACCAAAACCTTCAAACCAATCATGACGCACGACGAGCTCGAACCTATAATGGCTACTTTAGG
CTTCATCGCCCTAGAACCGGCCGTCAACGGCGCCGGAATCTCCTGGAAATCCTATAAATACTCCGCCGCTGATTGCCGAACCAAGTCGGTTTCTCCGTCGCCGCCAACAC
CGCGACTGCCGTATCCGAGAATCGACGGTCTTCACATTTATACATACAGAGCATTTCTCGATGCCGTCAATTTTTATCTCGAGAAATTTGATATCTCCGATCTCTTCCAT
ATTAGAGGATTGCCATTGTATCGAAACCATGATCGAAATAGGAAGTGGCGTCGAATGGACGAAGAAGGTGGTAATTTTGTTTACAGAGAAGGGACTCTAGATCAAACAAC
ACTCAATTTATATAATTTTCACAAGAATTGCCCAAATAACAAGAGATACAAAAGGAATGATAGTACTACGAGTGACGAAGAACATGACGACCGTGGAAAAATGATTGAAG
ACGGTACAGATGAAGACTCCATGTGCATTGTTAGTTTAAAAGATGTAATTACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGACTGCCTCAGGGAGTCCATGCGCAAGTTAGCCGTCTGGTTCACCAAAACCTTCAAACCAATCATGACGCACGACGAGCTCGAACCTATAATGGCTACTTTAGG
CTTCATCGCCCTAGAACCGGCCGTCAACGGCGCCGGAATCTCCTGGAAATCCTATAAATACTCCGCCGCTGATTGCCGAACCAAGTCGGTTTCTCCGTCGCCGCCAACAC
CGCGACTGCCGTATCCGAGAATCGACGGTCTTCACATTTATACATACAGAGCATTTCTCGATGCCGTCAATTTTTATCTCGAGAAATTTGATATCTCCGATCTCTTCCAT
ATTAGAGGATTGCCATTGTATCGAAACCATGATCGAAATAGGAAGTGGCGTCGAATGGACGAAGAAGGTGGTAATTTTGTTTACAGAGAAGGGACTCTAGATCAAACAAC
ACTCAATTTATATAATTTTCACAAGAATTGCCCAAATAACAAGAGATACAAAAGGAATGATAGTACTACGAGTGACGAAGAACATGACGACCGTGGAAAAATGATTGAAG
ACGGTACAGATGAAGACTCCATGTGCATTGTTAGTTTAAAAGATGTAATTACATAA
Protein sequenceShow/hide protein sequence
MEDCLRESMRKLAVWFTKTFKPIMTHDELEPIMATLGFIALEPAVNGAGISWKSYKYSAADCRTKSVSPSPPTPRLPYPRIDGLHIYTYRAFLDAVNFYLEKFDISDLFH
IRGLPLYRNHDRNRKWRRMDEEGGNFVYREGTLDQTTLNLYNFHKNCPNNKRYKRNDSTTSDEEHDDRGKMIEDGTDEDSMCIVSLKDVIT