; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10005542 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005542
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPectin lyase-like superfamily protein
Genome locationChr07:3477185..3483789
RNA-Seq ExpressionHG10005542
SyntenyHG10005542
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5541847.1 hypothetical protein DKX38_014821 [Salix brachista]8.6e-14074.02Show/hide
Query:  LRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEITV
        +RIKAVVDKFV+ELKEALDADIQDRIMKEREMQSYI+EREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEITV
Subjt:  LRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEITV

Query:  SGEKYRCLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMK
        SG   +       R IL             +SS +F V+ FGARA+G TDDS AF+AAW+ AC + G V  L+PKG YL+GPVKF+GPCKNVSSLT    
Subjt:  SGEKYRCLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMK

Query:  ARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLM
          GYLKA+  LS+YGSG GW+EF W+E LTLTGGGTFDG+GA+AWP+NNC  D  CKLLPTN+KFVAMN TVVQ ITSLNSKFFH+ALV+CK F+G+++ 
Subjt:  ARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLM

Query:  ISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGIR
        ISAPA+SPNTDGIH++RSSNV +SRS I TGDDCISIGQGNSQVTI+ I CGPGHGIR
Subjt:  ISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGIR

KAE8645702.1 hypothetical protein Csa_020363 [Cucumis sativus]1.1e-14779.94Show/hide
Query:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEI
        MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEI
Subjt:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEI

Query:  TVSGEKYRCLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVK
        T                                                      AFLAAWRMAC SAG VTFLIPKGTYLVGPV FSGPCKNVSSLTVK
Subjt:  TVSGEKYRCLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVK

Query:  MKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSK
        M+  GYLKAST+LSKYGSGAGWIEFRWMEGLTL GGGTFDGRGAEAWPFNNC DDYNCKLLPTNLKFVA+NNTVVQHITSLNSKFFHLALVQCKRF GS+
Subjt:  MKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSK

Query:  LMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI
        L ISAP NSPNTDGIHIDRSSN+H S SHIQTGDDCISIGQGNSQVTISS+NCGPGHGI
Subjt:  LMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI

KAF3434896.1 hypothetical protein FNV43_RR21983 [Rhamnella rubrinervis]2.7e-13370.05Show/hide
Query:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEI
        MSLRIKAVVDKFV+ELKEALDADIQDRIMKEREMQSYI+EREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTAS QDNQDGALEI
Subjt:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEI

Query:  TVSGEKYR------------CLSSVLSRG----------ILEADVSG--SLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIP
        T     +             CL  V  RG          +    + G  +LL  + KS   F+V++FGA A+  TD+SNAF AAW+ AC S G V  +IP
Subjt:  TVSGEKYR------------CLSSVLSRG----------ILEADVSG--SLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIP

Query:  KGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQ
         GTYL+GPVKF+GPC  VS LTV+MK  GYLKA+TDL KYG  +GWIEF WMEGLTLTGGGTFDG+GA AWP+NNC+ D NCKLLPTNLKFVAMN TVV+
Subjt:  KGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQ

Query:  HITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISS
         ITS+NSK FH+ALV C  F+GSK+ ISAPA SPNTDGIHI+RSS+V+ SRSHI TGDDC+SIGQGNSQVTI +
Subjt:  HITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISS

XP_023554538.1 exopolygalacturonase isoform X2 [Cucurbita pepo subsp. pepo]4.0e-12992.03Show/hide
Query:  CLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLK
        C SSVLSRGILEAD+SGSLLRYR KSS VFSVRSFGARANGLTDDSNAF   WRMACGSAG VTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMK  GYLK
Subjt:  CLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLK

Query:  ASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPAN
        ASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDD+NC LLPTNLKFVAMNNTVV+ ITSLNSKFFHLALVQCKRFRGS L ISAPAN
Subjt:  ASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPAN

Query:  SPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI
        SPNTDGIHIDRSSN+HLSRSHIQTGDDCISIGQGNSQVTI+ I+CGPGHGI
Subjt:  SPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI

XP_038886976.1 exopolygalacturonase isoform X1 [Benincasa hispida]5.6e-13194.42Show/hide
Query:  CLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLK
        C SSVLS   LEADVS SLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAG VTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMK  GYLK
Subjt:  CLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLK

Query:  ASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPAN
        ASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDG+GAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSL+SKFFHLALVQCKRFRGSKLMISAPAN
Subjt:  ASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPAN

Query:  SPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI
        SPNTDGIHIDRS NVHLS+S IQTGDDCISIGQGNSQVT+SSINCGPGHGI
Subjt:  SPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI

TrEMBL top hitse value%identityAlignment
A0A1R3K4Y7 Glycoside hydrolase, family 285.6e-12969.64Show/hide
Query:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEI
        MSLRIK VVDKFVEELKEAL+ADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEI
Subjt:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEI

Query:  TVSGEKYRCLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVK
        T                                                      AF AAW+ AC     V  +IPKGTYL+GPVKF+GPCKNVS +TV 
Subjt:  TVSGEKYRCLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVK

Query:  MKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSK
        +K  GYLKA+T+LSKYG  AGWIEF+W+EGL LTGGGTFDG+GA+AWP+NNC  D+NCKLLPTN+KFVA+N TVV+ ITS+NSKFFH+ALV+CK F+GSK
Subjt:  MKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSK

Query:  LMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI
        + ISAPA+SPNTDGIHI+RSS VH SRS I TGDDCISIGQGNSQ+TI+SI+CGPGHGI
Subjt:  LMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI

A0A1S3BQX3 exopolygalacturonase isoform X13.1e-12792.34Show/hide
Query:  SVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKAST
        S LSRGILE+DVSGSLLRYRTKSSHV+SVRSFGARANGLTDDSNAFLAAWR AC SAG VTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMK  GYLKAST
Subjt:  SVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKAST

Query:  DLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPN
        +LSKYGSGAGWIEFRWMEGLTLTGGGTFDGRG+EAWPFNNC DDYNCKLLPTNLKFVA+NNTVVQHITSLNSKFFHLALVQCK F GSKL ISAP NSPN
Subjt:  DLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPN

Query:  TDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI
        TDGIHIDRSSNVH S SHIQTGDDCISIGQGNS+VTISSINCGPGHGI
Subjt:  TDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI

A0A5N5LGD1 Uncharacterized protein4.2e-14074.02Show/hide
Query:  LRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEITV
        +RIKAVVDKFV+ELKEALDADIQDRIMKEREMQSYI+EREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEITV
Subjt:  LRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEITV

Query:  SGEKYRCLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMK
        SG   +       R IL             +SS +F V+ FGARA+G TDDS AF+AAW+ AC + G V  L+PKG YL+GPVKF+GPCKNVSSLT    
Subjt:  SGEKYRCLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMK

Query:  ARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLM
          GYLKA+  LS+YGSG GW+EF W+E LTLTGGGTFDG+GA+AWP+NNC  D  CKLLPTN+KFVAMN TVVQ ITSLNSKFFH+ALV+CK F+G+++ 
Subjt:  ARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLM

Query:  ISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGIR
        ISAPA+SPNTDGIH++RSSNV +SRS I TGDDCISIGQGNSQVTI+ I CGPGHGIR
Subjt:  ISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGIR

A0A6J1GKW5 exopolygalacturonase isoform X23.7e-12891.24Show/hide
Query:  CLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLK
        C SSVLSRGILEAD+SGSLLRYR KSS VFSVRSFGARANGLTDDSNAF   WRMACGSAG VTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMK  GYLK
Subjt:  CLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLK

Query:  ASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPAN
        ASTDLSKYGSGAGWIEFRW+EGLTLTGGGTFDGRGAEAWPFNNCLDD+NC LLPTNLKFVAMNNTVV+ ITSLNSKFFHLALVQCK FRGS L ISAPAN
Subjt:  ASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPAN

Query:  SPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI
        SPNTDGIHIDRSSN+HLSRSHIQTGDDCISIGQGNSQVTI+ I+CGPGHGI
Subjt:  SPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI

A0A6J1I1R6 exopolygalacturonase isoform X21.1e-12790.84Show/hide
Query:  CLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLK
        C SSVLSRGILEAD+SGSLLRY  KSSHVFSVRSFGARANGLTDDS+AF   WRMAC SAG VTFLIPKGTYLVGPVKFSGPCKNVSSL VKMK  GYLK
Subjt:  CLSSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLK

Query:  ASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPAN
        ASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDD+NC LLPTNLKFVAMNNTVV+ ITSLNSKFFHLALVQCKRFRGS L ISAPAN
Subjt:  ASTDLSKYGSGAGWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPAN

Query:  SPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI
        SPNTDGIHIDRSSN+HLSRSHIQTGDDCISIGQGNSQVTI+ I+CGPGHGI
Subjt:  SPNTDGIHIDRSSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI

SwissProt top hitse value%identityAlignment
P26216 Exopolygalacturonase1.4e-5245.5Show/hide
Query:  FSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGG
        F +   GA  NG TD + A   AW  ACG  G  T LIPKG +LVG + F+GPCK      V ++  G L A+TDLS+Y     WIE   ++ L +TG G
Subjt:  FSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGG

Query:  TFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCI
          DG+G   W  N+C   Y+CK+LP +L    +NN  V  +T LNSKFFH+ + +CK      + ++AP +SPNTDGIH+  SS + ++ + I  GDDCI
Subjt:  TFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCI

Query:  SIGQGNSQVTISSINCGPGHGI
        SIG G S+V I+ + CGPGHGI
Subjt:  SIGQGNSQVTISSINCGPGHGI

P35338 Exopolygalacturonase2.8e-5345.95Show/hide
Query:  FSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGG
        F +   GA  NG TD + A   AW  ACG  G  T LIPKG +LVG + F+GPCK      V ++  G L A+TDLS+Y     WIE   ++ L +TG G
Subjt:  FSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGG

Query:  TFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCI
          DG+G   W  N+C   Y+CK+LP +L    +NN  V  +T LNSKFFH+ + QCK      + ++AP +SPNTDGIH+  SS + ++ + I  GDDCI
Subjt:  TFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCI

Query:  SIGQGNSQVTISSINCGPGHGI
        SIG G S+V I+ + CGPGHGI
Subjt:  SIGQGNSQVTISSINCGPGHGI

P35339 Exopolygalacturonase5.7e-5446.85Show/hide
Query:  FSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGG
        F +   GA  NG TD + A   AW  ACG  G  T LIPKG +LVGP+ F+GPCK      V ++  G L A+TDLS+Y     WIE   ++ L +TG G
Subjt:  FSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGGG

Query:  TFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCI
          DG+G   W  N+C+  Y+CK+LP +L    +NN  V  IT LNSKFFH+ + +CK      + ++AP +SPNTDGIH+  SS V ++ + I  GDDCI
Subjt:  TFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCI

Query:  SIGQGNSQVTISSINCGPGHGI
        SIG G S+V I+ + CGPGHGI
Subjt:  SIGQGNSQVTISSINCGPGHGI

P49063 Exopolygalacturonase clone GBGA4835.2e-4741.25Show/hide
Query:  ADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGA
        A VSG+      K      V++ GA+ +  TDDS AF AAW+ AC +   +T  +PKG Y+V  ++F GPCK      V ++  G  KA   +      A
Subjt:  ADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGA

Query:  GWIEFRWMEGLTLTGG-GTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDR
        GWI+F  +   TL G    FDG+G+ AW  N+C     C  LP N++F  + N+ +  ITS NSK FH+ ++ CK    S + I AP  S NTDGIHI R
Subjt:  GWIEFRWMEGLTLTGG-GTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDR

Query:  SSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI
        S+ V+L  + I+TGDDC+SIG G   + + ++ CGPGHGI
Subjt:  SSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI

Q6H9K0 Exopolygalacturonase (Fragment)2.9e-5045.58Show/hide
Query:  SSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTL
        S  VF+V  +GA+  G  D S A + AW+ AC S G  T LIPKG Y +G V   GPCK      +  +  G +KA  D SK+ S  GW+ F  ++GLT+
Subjt:  SSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTL

Query:  TGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTG
        +G GT DG+G  AW  NNC  + NCK    NL+F  + + +V+ ITSLNSK FH+ +++C+      + ++AP  S NTDGIH+  S  V ++ + I TG
Subjt:  TGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTG

Query:  DDCISIGQGNSQVTISSINCGPGHGI
        DDCISIG G+  VTI+ +NCGPGHGI
Subjt:  DDCISIGQGNSQVTISSINCGPGHGI

Arabidopsis top hitse value%identityAlignment
AT1G43080.1 Pectin lyase-like superfamily protein3.7e-4842.41Show/hide
Query:  VFSVRSFGARANGLTDDSNAFLAAWRMACGS-AGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTG
        VF+VR +G+R +G TD++NAF + W+ AC   +G+    +PKGT+ +G V+F GPCKN     ++    G L A  +         WI FR++  L+++G
Subjt:  VFSVRSFGARANGLTDDSNAFLAAWRMACGS-AGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTG

Query:  GGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDD
         GT DG+G  +WP N+C  + NC  L   + F  +NN+ ++ ITSLNSK  H       RF  + + I+AP +SPNTDGI +   SN+H+S ++I TGDD
Subjt:  GGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDD

Query:  CISIGQGNSQVTISSINCGPGHGI
        CI+I  G + + IS+I CGPGHGI
Subjt:  CISIGQGNSQVTISSINCGPGHGI

AT2G17350.1 unknown protein1.3e-4896.36Show/hide
Query:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEI
        MSLRIK VVDKFVEELK+ALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRRE EIARQEARLKME+ENLEKEKSVLMGTASNQDNQDGALEI
Subjt:  MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEI

Query:  TVSGEKYRCL
        TVSGEKYRCL
Subjt:  TVSGEKYRCL

AT3G07850.1 Pectin lyase-like superfamily protein3.7e-4841.25Show/hide
Query:  ADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGA
        A VSG+      K      V++ GA+ +  TDDS AF AAW+ AC +   +T  +PKG Y+V  ++F GPCK      V ++  G  KA   +      A
Subjt:  ADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGA

Query:  GWIEFRWMEGLTLTGG-GTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDR
        GWI+F  +   TL G    FDG+G+ AW  N+C     C  LP N++F  + N+ +  ITS NSK FH+ ++ CK    S + I AP  S NTDGIHI R
Subjt:  GWIEFRWMEGLTLTGG-GTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDR

Query:  SSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI
        S+ V+L  + I+TGDDC+SIG G   + + ++ CGPGHGI
Subjt:  SSNVHLSRSHIQTGDDCISIGQGNSQVTISSINCGPGHGI

AT3G14040.1 Pectin lyase-like superfamily protein1.3e-4842.99Show/hide
Query:  VRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGG-GT
        V++ GA+ +G TDDS AF AAW+ AC +   +T  +PKG YLV  ++F GPCK      V ++  G  KA   +      AGWI+F  +   TL G    
Subjt:  VRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLTLTGG-GT

Query:  FDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCIS
        FDG+G+ AW  N+C     C  LP N++F  + N+ +  ITS NSK FH+ ++ CK    + + I AP  S NTDGIHI RS+ V+L  + I+TGDDC+S
Subjt:  FDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQTGDDCIS

Query:  IGQGNSQVTISSINCGPGHGI
        IG G   + + ++ CGPGHGI
Subjt:  IGQGNSQVTISSINCGPGHGI

AT4G18180.1 Pectin lyase-like superfamily protein4.5e-8666.52Show/hide
Query:  SSHVFSVRSFGARANGLTDDSNAFLAAWRMAC-GSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLT
        S  +  VRSFGARAN   D + AF+AAW  AC  S+ +V  +IP+G + VG ++FSGPC NVS+LTV+      +KASTDLSKY SG GWI+F W+ GLT
Subjt:  SSHVFSVRSFGARANGLTDDSNAFLAAWRMAC-GSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGAGWIEFRWMEGLT

Query:  LTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQT
        LTGGGTFDG+GA AWPFNNC  D NCKLLPT+LKFV MN TVV+ I+S+NSKFFH+ALV+C+ F+G++L I+AP++SPNTDGIHI+RSSNV+ SRSHI T
Subjt:  LTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHIQT

Query:  GDDCISIGQGNSQVTISSINCGPGHGI
        GDDC+SIGQGNSQ+TI+SI CGPGHGI
Subjt:  GDDCISIGQGNSQVTISSINCGPGHGI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTGAGAATTAAGGCAGTGGTGGATAAATTCGTGGAGGAGCTTAAGGAAGCACTGGATGCGGACATTCAAGATCGAATCATGAAGGAGAGAGAGATGCAGAGTTA
CATTGAAGAGCGCGAACGTGAGGTTGCTGAACGTGAAGCTGCTTGGAAAGCTGAGCTCTCCCGTCGCGAGGCAGAGATTGCAAGACAAGAAGCAAGGTTGAAGATGGAGA
AGGAAAATCTGGAAAAGGAGAAAAGTGTGCTAATGGGAACTGCATCAAATCAAGATAATCAAGATGGAGCTCTTGAAATTACTGTAAGTGGTGAAAAGTACAGATGCCTC
AGCTCAGTTCTTAGTAGAGGAATATTGGAAGCAGACGTTTCAGGAAGCTTATTGCGTTATAGAACTAAGAGTTCTCATGTTTTCAGTGTTAGAAGCTTTGGTGCTCGAGC
AAATGGCTTAACTGATGATAGCAATGCCTTCTTAGCAGCATGGAGGATGGCCTGTGGTTCAGCTGGAGCGGTAACTTTCCTGATTCCAAAGGGAACGTATTTGGTTGGTC
CAGTTAAATTTTCTGGCCCTTGCAAAAATGTGTCATCTCTAACAGTTAAAATGAAGGCAAGGGGCTATTTGAAGGCATCAACAGACCTGTCGAAATATGGTTCTGGTGCA
GGCTGGATTGAGTTCAGATGGATGGAGGGGCTAACCTTGACTGGAGGTGGAACCTTCGATGGTCGAGGCGCCGAGGCATGGCCATTCAACAACTGCCTTGATGACTACAA
TTGCAAACTCCTTCCTACTAACTTGAAATTTGTGGCTATGAATAACACGGTTGTTCAACACATAACTTCGCTAAACAGCAAGTTCTTTCACCTGGCTTTAGTACAATGCA
AGAGGTTCAGAGGTAGCAAACTTATGATTTCAGCTCCGGCAAATAGTCCCAACACCGACGGCATCCACATTGACCGAAGTTCTAACGTCCATCTTTCTCGATCACATATT
CAAACTGGTGACGACTGCATATCCATCGGACAAGGGAACTCTCAAGTCACAATCTCCAGCATCAACTGTGGACCAGGCCATGGGATCAGGTACGTAGATTGCTGCCAAAA
AGTTTTATCCTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTGAGAATTAAGGCAGTGGTGGATAAATTCGTGGAGGAGCTTAAGGAAGCACTGGATGCGGACATTCAAGATCGAATCATGAAGGAGAGAGAGATGCAGAGTTA
CATTGAAGAGCGCGAACGTGAGGTTGCTGAACGTGAAGCTGCTTGGAAAGCTGAGCTCTCCCGTCGCGAGGCAGAGATTGCAAGACAAGAAGCAAGGTTGAAGATGGAGA
AGGAAAATCTGGAAAAGGAGAAAAGTGTGCTAATGGGAACTGCATCAAATCAAGATAATCAAGATGGAGCTCTTGAAATTACTGTAAGTGGTGAAAAGTACAGATGCCTC
AGCTCAGTTCTTAGTAGAGGAATATTGGAAGCAGACGTTTCAGGAAGCTTATTGCGTTATAGAACTAAGAGTTCTCATGTTTTCAGTGTTAGAAGCTTTGGTGCTCGAGC
AAATGGCTTAACTGATGATAGCAATGCCTTCTTAGCAGCATGGAGGATGGCCTGTGGTTCAGCTGGAGCGGTAACTTTCCTGATTCCAAAGGGAACGTATTTGGTTGGTC
CAGTTAAATTTTCTGGCCCTTGCAAAAATGTGTCATCTCTAACAGTTAAAATGAAGGCAAGGGGCTATTTGAAGGCATCAACAGACCTGTCGAAATATGGTTCTGGTGCA
GGCTGGATTGAGTTCAGATGGATGGAGGGGCTAACCTTGACTGGAGGTGGAACCTTCGATGGTCGAGGCGCCGAGGCATGGCCATTCAACAACTGCCTTGATGACTACAA
TTGCAAACTCCTTCCTACTAACTTGAAATTTGTGGCTATGAATAACACGGTTGTTCAACACATAACTTCGCTAAACAGCAAGTTCTTTCACCTGGCTTTAGTACAATGCA
AGAGGTTCAGAGGTAGCAAACTTATGATTTCAGCTCCGGCAAATAGTCCCAACACCGACGGCATCCACATTGACCGAAGTTCTAACGTCCATCTTTCTCGATCACATATT
CAAACTGGTGACGACTGCATATCCATCGGACAAGGGAACTCTCAAGTCACAATCTCCAGCATCAACTGTGGACCAGGCCATGGGATCAGGTACGTAGATTGCTGCCAAAA
AGTTTTATCCTTCTGA
Protein sequenceShow/hide protein sequence
MSLRIKAVVDKFVEELKEALDADIQDRIMKEREMQSYIEEREREVAEREAAWKAELSRREAEIARQEARLKMEKENLEKEKSVLMGTASNQDNQDGALEITVSGEKYRCL
SSVLSRGILEADVSGSLLRYRTKSSHVFSVRSFGARANGLTDDSNAFLAAWRMACGSAGAVTFLIPKGTYLVGPVKFSGPCKNVSSLTVKMKARGYLKASTDLSKYGSGA
GWIEFRWMEGLTLTGGGTFDGRGAEAWPFNNCLDDYNCKLLPTNLKFVAMNNTVVQHITSLNSKFFHLALVQCKRFRGSKLMISAPANSPNTDGIHIDRSSNVHLSRSHI
QTGDDCISIGQGNSQVTISSINCGPGHGIRYVDCCQKVLSF