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HG10005650 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005650
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr07:4577391..4579751
RNA-Seq ExpressionHG10005650
SyntenyHG10005650
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572110.1 hypothetical protein SDJN03_28838, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1760.19Show/hide
Query:  MACFLVKCGVSHQVPRIREDDNSRKARKIQRDGIVVGEAPAKVKSKKW-HRRRQVGGKERKTVSSSRLPRSQRGRAELGGWLAAWLEEAE-GEREKDEVK
        M CFLV CGVS Q  RI+ D+N RK +K+ RDGIVV E P   K KKW  RRR+VG  ER+T   SRL R+  GR E GGWLAAWLEEAE  E EK   K
Subjt:  MACFLVKCGVSHQVPRIREDDNSRKARKIQRDGIVVGEAPAKVKSKKW-HRRRQVGGKERKTVSSSRLPRSQRGRAELGGWLAAWLEEAE-GEREKDEVK

Query:  ELE
         LE
Subjt:  ELE

KAG6589008.1 hypothetical protein SDJN03_17573, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1050Show/hide
Query:  SHQVPRIREDDNSRKARKIQRDGIVVGEAPAKVKSKKWHRRRQVGGKERKTVSSSRLPRSQRGRAELGGWLAAWLEEAEGEREKDEVKELEKCGVS
        S QV RI +D+ S+K+RK QRD   VG+    + +K+  R+R+V  KE+KT+S +   R +R   ELGGWLAAWLEEAE   EKDE+K LE+  +S
Subjt:  SHQVPRIREDDNSRKARKIQRDGIVVGEAPAKVKSKKWHRRRQVGGKERKTVSSSRLPRSQRGRAELGGWLAAWLEEAEGEREKDEVKELEKCGVS

KAG6589009.1 hypothetical protein SDJN03_17574, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1551.96Show/hide
Query:  MACFLVKCGVSHQVPRIREDDNSRKARKIQRDGIVVGEAPAKVKSKKWHRRRQVGGKERKTVSSSRLPRSQRGRAELGGWLAAWLEEAEGEREKDEVKEL
        MACF +KCG S QVPRI+ DD S+K  + Q+D   V EAP ++ +++ H++R V  KERKT S  R      G++E  GWLAAWLEEAEG  EKDE+K L
Subjt:  MACFLVKCGVSHQVPRIREDDNSRKARKIQRDGIVVGEAPAKVKSKKWHRRRQVGGKERKTVSSSRLPRSQRGRAELGGWLAAWLEEAEGEREKDEVKEL

Query:  EK
        ++
Subjt:  EK

KAG7011763.1 Ubiquitin-conjugating enzyme E2 28 [Cucurbita argyrosperma subsp. argyrosperma]9.9e-1359.09Show/hide
Query:  RIREDDNSRKARKIQRDGIVVGEAPAKVKSKKW-HRRRQVGGKERKTVSSSRLPRSQRGRAELGGWLAAWLEEAE-GEREKDEVKELE
        RI+ D+N RK +K+ RDGIVV E P   K KKW  RRR+VG  ER+T   SRL R+  GR E GGWLAAWLEEAE  E EK   K LE
Subjt:  RIREDDNSRKARKIQRDGIVVGEAPAKVKSKKW-HRRRQVGGKERKTVSSSRLPRSQRGRAELGGWLAAWLEEAE-GEREKDEVKELE

KGN43248.1 hypothetical protein Csa_020351 [Cucumis sativus]4.3e-2470.48Show/hide
Query:  MACFLVKCGVSHQVPRIREDDNSRKARKIQR-DGIVVGEAPAKVK-SKKWHRRRQVGGKERKTV-SSSRLPRSQRGRAELGGWLAAWLEEAEGEREKDEV
        M CFL KCG  +QV RIRED ++RK RKI+R D IV+GEAP  +K S+K HRR  V  KERK + SSSRL RSQ  R ELGGWLAAWLEEAEGEREKDEV
Subjt:  MACFLVKCGVSHQVPRIREDDNSRKARKIQR-DGIVVGEAPAKVK-SKKWHRRRQVGGKERKTV-SSSRLPRSQRGRAELGGWLAAWLEEAEGEREKDEV

Query:  KELEK
        KELEK
Subjt:  KELEK

TrEMBL top hitse value%identityAlignment
A0A0A0K1A5 Uncharacterized protein2.1e-2470.48Show/hide
Query:  MACFLVKCGVSHQVPRIREDDNSRKARKIQR-DGIVVGEAPAKVK-SKKWHRRRQVGGKERKTV-SSSRLPRSQRGRAELGGWLAAWLEEAEGEREKDEV
        M CFL KCG  +QV RIRED ++RK RKI+R D IV+GEAP  +K S+K HRR  V  KERK + SSSRL RSQ  R ELGGWLAAWLEEAEGEREKDEV
Subjt:  MACFLVKCGVSHQVPRIREDDNSRKARKIQR-DGIVVGEAPAKVK-SKKWHRRRQVGGKERKTV-SSSRLPRSQRGRAELGGWLAAWLEEAEGEREKDEV

Query:  KELEK
        KELEK
Subjt:  KELEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGTTTCCTTGTCAAGTGTGGGGTATCACATCAAGTGCCAAGAATTCGCGAAGATGACAATAGTAGAAAGGCAAGAAAAATTCAAAGAGATGGTATTGTTGTTGG
CGAGGCGCCTGCAAAGGTAAAGAGTAAGAAATGGCATCGACGAAGACAGGTAGGCGGTAAGGAGAGAAAGACGGTGTCATCGTCGAGGTTGCCACGATCACAAAGAGGGA
GAGCTGAGTTGGGTGGTTGGCTTGCAGCATGGTTGGAAGAGGCCGAAGGAGAAAGAGAGAAAGATGAAGTTAAAGAGTTGGAGAAGTGTGGGGTATCACATCAAGTGCCA
AGAATTCGCGAAGATGGCAATAATAGAAATGTAAGAAAAATTCAAAAGGATGGTATTATCGTCGGTGAGACGCCTGAAATGATAAAAAACAAGAAATGGCATCAACGAAG
ATGGGTAGGTGGTAAGGAGAGAAAGACGGTGCCATCGTTGAAGTTGCGACGATCGCAAAAAGGGAGAGTTGAGTTAGGTGGGTGGTTTGCAGCATGGTTGGAAGAGGCTG
AAGGGGAAAGAGAGAAAGATGAAGTTAAGGTGTTGGGGAAGAAAATTGAAGAAGCCCCTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGTTTCCTTGTCAAGTGTGGGGTATCACATCAAGTGCCAAGAATTCGCGAAGATGACAATAGTAGAAAGGCAAGAAAAATTCAAAGAGATGGTATTGTTGTTGG
CGAGGCGCCTGCAAAGGTAAAGAGTAAGAAATGGCATCGACGAAGACAGGTAGGCGGTAAGGAGAGAAAGACGGTGTCATCGTCGAGGTTGCCACGATCACAAAGAGGGA
GAGCTGAGTTGGGTGGTTGGCTTGCAGCATGGTTGGAAGAGGCCGAAGGAGAAAGAGAGAAAGATGAAGTTAAAGAGTTGGAGAAGTGTGGGGTATCACATCAAGTGCCA
AGAATTCGCGAAGATGGCAATAATAGAAATGTAAGAAAAATTCAAAAGGATGGTATTATCGTCGGTGAGACGCCTGAAATGATAAAAAACAAGAAATGGCATCAACGAAG
ATGGGTAGGTGGTAAGGAGAGAAAGACGGTGCCATCGTTGAAGTTGCGACGATCGCAAAAAGGGAGAGTTGAGTTAGGTGGGTGGTTTGCAGCATGGTTGGAAGAGGCTG
AAGGGGAAAGAGAGAAAGATGAAGTTAAGGTGTTGGGGAAGAAAATTGAAGAAGCCCCTTTATGA
Protein sequenceShow/hide protein sequence
MACFLVKCGVSHQVPRIREDDNSRKARKIQRDGIVVGEAPAKVKSKKWHRRRQVGGKERKTVSSSRLPRSQRGRAELGGWLAAWLEEAEGEREKDEVKELEKCGVSHQVP
RIREDGNNRNVRKIQKDGIIVGETPEMIKNKKWHQRRWVGGKERKTVPSLKLRRSQKGRVELGGWFAAWLEEAEGEREKDEVKVLGKKIEEAPL