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HG10005667 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005667
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr07:4734356..4734706
RNA-Seq ExpressionHG10005667
SyntenyHG10005667
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038886170.1 uncharacterized protein LOC120076417 [Benincasa hispida]6.6e-1451.61Show/hide
Query:  VLLVELKFIPLCNEVKLLEAITGCFRLESISSLHLFNLLVESDCL-EVVNLLDDEVIDISKVSFFIYEAKGWDYDLGDVSFSQFRRSQNALAH
        V +  LKF+  C +V +LEAI  CF LE +SS+ + N++VESDCL EV+NLL+D+V+D+S+VSF   EAK    +LG +SFS  RR +N LA+
Subjt:  VLLVELKFIPLCNEVKLLEAITGCFRLESISSLHLFNLLVESDCL-EVVNLLDDEVIDISKVSFFIYEAKGWDYDLGDVSFSQFRRSQNALAH
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGCTTCGAGACTATTTGGGTCGGTATTGCTTGTTGAACTGAAATTCATCCCTCTATGCAATGAGGTGAAACTTCTTGAAGCGATAACCGGTTGTTTTCGGCTAGA
GAGTATTTCTTCACTCCATCTTTTCAATCTTTTAGTTGAATCTGACTGCTTGGAGGTTGTTAATTTGTTGGATGATGAGGTGATAGACATTTCTAAAGTCTCTTTCTTTA
TTTACGAGGCTAAGGGTTGGGATTATGATTTGGGCGATGTTTCATTCTCTCAATTTCGTCGGAGCCAAAATGCATTGGCACACTATGTCGCACATGAGGATTTGGGAGAG
CATGAGTCTTCCATGATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGCTTCGAGACTATTTGGGTCGGTATTGCTTGTTGAACTGAAATTCATCCCTCTATGCAATGAGGTGAAACTTCTTGAAGCGATAACCGGTTGTTTTCGGCTAGA
GAGTATTTCTTCACTCCATCTTTTCAATCTTTTAGTTGAATCTGACTGCTTGGAGGTTGTTAATTTGTTGGATGATGAGGTGATAGACATTTCTAAAGTCTCTTTCTTTA
TTTACGAGGCTAAGGGTTGGGATTATGATTTGGGCGATGTTTCATTCTCTCAATTTCGTCGGAGCCAAAATGCATTGGCACACTATGTCGCACATGAGGATTTGGGAGAG
CATGAGTCTTCCATGATTTAA
Protein sequenceShow/hide protein sequence
MGASRLFGSVLLVELKFIPLCNEVKLLEAITGCFRLESISSLHLFNLLVESDCLEVVNLLDDEVIDISKVSFFIYEAKGWDYDLGDVSFSQFRRSQNALAHYVAHEDLGE
HESSMI