; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10005672 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005672
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTransmembrane protein
Genome locationChr07:4754867..4755256
RNA-Seq ExpressionHG10005672
SyntenyHG10005672
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049726.1 hypothetical protein E6C27_scaffold76G00740 [Cucumis melo var. makuwa]2.8e-6193.02Show/hide
Query:  MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEG
        M+SYR+RTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAED INWILFATPVLLI+LVRFLSS+DPSFFSSSPWDRRRRTHH+PAEG
Subjt:  MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEG

Query:  SSPWGVAALIVLLLVLVQFQSSFRESWSI
        +SPWGVAA IVLLLVL+QFQSSFRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSSFRESWSI

KAG6588994.1 hypothetical protein SDJN03_17559, partial [Cucurbita argyrosperma subsp. sororia]1.5e-5993.02Show/hide
Query:  MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEG
        MS+YR+RTTADSILDSLSLNP PYPVLLLLAVV IFLGASWWLSYESAVEAAEDQINWILFATPVLLI+L R LSSVDPS+FSSSPWDRRRRTH LPAEG
Subjt:  MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEG

Query:  SSPWGVAALIVLLLVLVQFQSSFRESWSI
        SSPWGVAALIVLLLVLVQFQSSFRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSSFRESWSI

KGN43227.1 hypothetical protein Csa_020160 [Cucumis sativus]3.6e-6192.25Show/hide
Query:  MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEG
        M+SYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAED INWILFATPVLLI+LVRFLSS+DP+FFSSSPWDRRRRTHH+PAEG
Subjt:  MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEG

Query:  SSPWGVAALIVLLLVLVQFQSSFRESWSI
        +SPWGVAA I+LLLVL+QFQSSFRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSSFRESWSI

XP_022989070.1 uncharacterized protein LOC111486253 [Cucurbita maxima]1.6e-6195.35Show/hide
Query:  MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEG
        MS+YR+RTTADSILDSLSLNP PYPVLLLLAVV IFLGASWWLSYESAVEAAEDQINWILFATPVLLI+L RFLSSVDPSFFSSSPWDRRRRTHHLPAEG
Subjt:  MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEG

Query:  SSPWGVAALIVLLLVLVQFQSSFRESWSI
        SSPWGVAALIVLLLVLVQFQSSFRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSSFRESWSI

XP_038888316.1 uncharacterized protein LOC120078163 [Benincasa hispida]3.9e-6397.67Show/hide
Query:  MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEG
        M+ YRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVR LSSVDPSFFSSSPWDRRRRTHHLPAEG
Subjt:  MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEG

Query:  SSPWGVAALIVLLLVLVQFQSSFRESWSI
        SSPWGVAALIVLLLVLVQFQSSFRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSSFRESWSI

TrEMBL top hitse value%identityAlignment
A0A0A0K4L6 Uncharacterized protein1.8e-6192.25Show/hide
Query:  MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEG
        M+SYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAED INWILFATPVLLI+LVRFLSS+DP+FFSSSPWDRRRRTHH+PAEG
Subjt:  MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEG

Query:  SSPWGVAALIVLLLVLVQFQSSFRESWSI
        +SPWGVAA I+LLLVL+QFQSSFRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSSFRESWSI

A0A5A7U6E4 Uncharacterized protein1.3e-6193.02Show/hide
Query:  MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEG
        M+SYR+RTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAED INWILFATPVLLI+LVRFLSS+DPSFFSSSPWDRRRRTHH+PAEG
Subjt:  MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEG

Query:  SSPWGVAALIVLLLVLVQFQSSFRESWSI
        +SPWGVAA IVLLLVL+QFQSSFRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSSFRESWSI

A0A5N5I8U5 Uncharacterized protein9.0e-4266.41Show/hide
Query:  SYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSF-FSSSPWDRRRRTHHLPAEGS
        +Y  R+   S L+  SL+P PYPVLL+LAV+SIFLG SW+ SYESAVE AE Q NW+L  TP+ LI++V+ LSS+DP + FS SPWDRRRRTHH+P+EGS
Subjt:  SYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSF-FSSSPWDRRRRTHHLPAEGS

Query:  SPWGVAALIVLLLVLVQFQSSFRESWSI
        SPWGVAA I+LLLVL+Q+QSSFR+SW I
Subjt:  SPWGVAALIVLLLVLVQFQSSFRESWSI

A0A6J1C2N0 uncharacterized protein LOC1110078952.7e-5486.82Show/hide
Query:  MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEG
        MS YR R+TADSILDSLSLNP PYPVLLLL VV +FLGASWW SYESAVEAAE+QINW+LFATPVLLIVLVR LSSVDPSFF+SSPW+RRR TH LP EG
Subjt:  MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEG

Query:  SSPWGVAALIVLLLVLVQFQSSFRESWSI
        SSPWGVAALIVLLLVLVQFQS+FRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSSFRESWSI

A0A6J1JLC4 uncharacterized protein LOC1114862537.9e-6295.35Show/hide
Query:  MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEG
        MS+YR+RTTADSILDSLSLNP PYPVLLLLAVV IFLGASWWLSYESAVEAAEDQINWILFATPVLLI+L RFLSSVDPSFFSSSPWDRRRRTHHLPAEG
Subjt:  MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEG

Query:  SSPWGVAALIVLLLVLVQFQSSFRESWSI
        SSPWGVAALIVLLLVLVQFQSSFRESWSI
Subjt:  SSPWGVAALIVLLLVLVQFQSSFRESWSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein6.0e-3059.52Show/hide
Query:  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDP-----SFFSSSPWDRRRRTHHLPAE----GSS
        SILDS SL+P PYPVLL+LAV S+FL +SW+ S E A E+AE+QIN+ L   P+ LIVLVR+LSS++        FSSS    RR T+  P      GSS
Subjt:  SILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDP-----SFFSSSPWDRRRRTHHLPAE----GSS

Query:  PWGVAALIVLLLVLVQFQSSFRESWS
        PWGVAALIVLLLVL+Q+QSSF E WS
Subjt:  PWGVAALIVLLLVLVQFQSSFRESWS

AT2G31940.1 unknown protein2.8e-1131.78Show/hide
Query:  PPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ
        P P  + + + ++ +F+  SW+ SYE  +E    Q    L A+P+LL++ V FLS         +          L   G +PWGVA ++V L  +V +Q
Subjt:  PPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVLVQFQ

Query:  SSFRESW
        S F+E W
Subjt:  SSFRESW

AT5G19875.1 unknown protein2.4e-1541.88Show/hide
Query:  SILDSLSLNPPPYPVLLLLAVVSIF-LGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALI
        S LD LSL   P P L  L +V  F L  +W+L++ES +E   D +  +   TP+ L++LV F S    SF+   PW  +   H     GSSPWGVAA++
Subjt:  SILDSLSLNPPPYPVLLLLAVVSIF-LGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALI

Query:  VLLLVLVQFQSSFRESW
        VL+L +V +QS F+E W
Subjt:  VLLLVLVQFQSSFRESW

AT5G42146.1 unknown protein3.7e-1134.23Show/hide
Query:  LSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVL
        L+ + PP  +L LLA++S+ L  S +  Y+  VE     +   +   P+L + ++  LS V    F SS   R  +   L  EG+ PWGV  +++LLL+L
Subjt:  LSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALIVLLLVL

Query:  VQFQSSFRESW
        V  QS F   W
Subjt:  VQFQSSFRESW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCTTACAGAAACAGAACCACGGCAGATTCAATTCTCGATTCTCTTTCCCTCAATCCTCCGCCGTATCCAGTCCTCCTCCTCCTCGCCGTCGTCTCCATCTTCCT
CGGCGCTTCCTGGTGGCTCTCCTACGAGTCCGCCGTAGAGGCTGCCGAGGATCAGATCAACTGGATTCTCTTCGCCACACCGGTTCTCCTCATCGTTCTCGTCCGATTCC
TCTCCTCTGTCGATCCGAGCTTCTTTTCTTCCTCGCCTTGGGACCGTCGCCGCCGCACGCATCACCTCCCGGCCGAAGGAAGCTCGCCATGGGGCGTGGCTGCGTTGATC
GTGCTGTTGCTCGTTCTTGTCCAGTTCCAGTCCTCGTTCCGTGAGAGCTGGTCCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTCTTACAGAAACAGAACCACGGCAGATTCAATTCTCGATTCTCTTTCCCTCAATCCTCCGCCGTATCCAGTCCTCCTCCTCCTCGCCGTCGTCTCCATCTTCCT
CGGCGCTTCCTGGTGGCTCTCCTACGAGTCCGCCGTAGAGGCTGCCGAGGATCAGATCAACTGGATTCTCTTCGCCACACCGGTTCTCCTCATCGTTCTCGTCCGATTCC
TCTCCTCTGTCGATCCGAGCTTCTTTTCTTCCTCGCCTTGGGACCGTCGCCGCCGCACGCATCACCTCCCGGCCGAAGGAAGCTCGCCATGGGGCGTGGCTGCGTTGATC
GTGCTGTTGCTCGTTCTTGTCCAGTTCCAGTCCTCGTTCCGTGAGAGCTGGTCCATTTGA
Protein sequenceShow/hide protein sequence
MSSYRNRTTADSILDSLSLNPPPYPVLLLLAVVSIFLGASWWLSYESAVEAAEDQINWILFATPVLLIVLVRFLSSVDPSFFSSSPWDRRRRTHHLPAEGSSPWGVAALI
VLLLVLVQFQSSFRESWSI