CuGenDBv2

Gene ID	HG10005679
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	EF-Hand containing protein
Genome location	Chr07:4787377..4787811
RNA-Seq Expression	HG10005679
Synteny	HG10005679
Gene Ontology terms	GO:0005509 - calcium ion binding (molecular function)
InterPro domains	IPR002048 - EF-hand domain IPR011992 - EF-hand domain pair IPR018247 - EF-Hand 1, calcium-binding site

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7011745.1 hypothetical protein SDJN02_26651, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.4e-37

89.47

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Query:  MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEVSFPF
        MD+ SS PSSSSSPLKR TGQ+LDGSEIMELVAN HVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTS DSDNIYSEV   F
Subjt:  MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEVSFPF

XP_022952464.1 uncharacterized protein LOC111455144 isoform X1 [Cucurbita moschata]

2.4e-37

89.47

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Query:  MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEVSFPF
        MD+ SS PSSSSSPLKR TGQ+LDGSEIMELVAN HVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTS DSDNIYSEV   F
Subjt:  MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEVSFPF

XP_022969499.1 uncharacterized protein LOC111468478 isoform X1 [Cucurbita maxima]

3.7e-38

90.53

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Query:  MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEVSFPF
        MD+ SS PSSSSSPLKR TGQ+LDGSEIMELVAN HVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEV   F
Subjt:  MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEVSFPF

XP_023553715.1 uncharacterized protein LOC111811192 isoform X1 [Cucurbita pepo subsp. pepo]

2.2e-38

93.41

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Query:  MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEV
        MD+ SS PSSSSSPLKR TGQ+LDGSEIMELVAN HVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEV
Subjt:  MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEV

XP_038886819.1 uncharacterized protein LOC120077051 isoform X1 [Benincasa hispida]

1.1e-39

97.83

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Query:  MDSASSPP-SSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEV
        MDSASSPP SSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVA IGAALGLPPQGTSLDSDNIYSEV
Subjt:  MDSASSPP-SSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K5V6 EF-Hand containing protein

7.2e-32

83.52

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Query:  MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEV
        MD   S PSSSS P      QVLDGSEIMELVANNH+FSSFVDHKFH+LDTDKDGKLSL+ELHPAVADIGAALGLPPQGTSLDSDNIYS+V
Subjt:  MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEV

A0A6J1EP36 uncharacterized protein LOC111435264 isoform X1

2.8e-36

89.01

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Query:  MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEV
        MDSASSPPSSSSSPLKRPTGQVLDGSEIMELV NNHVFSSFV HKFHELDTDKDGKLSL+ELHP +ADIGAALGLPP  TS  SD IYSEV
Subjt:  MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEV

A0A6J1GLS8 uncharacterized protein LOC111455144 isoform X1

1.2e-37

89.47

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Query:  MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEVSFPF
        MD+ SS PSSSSSPLKR TGQ+LDGSEIMELVAN HVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTS DSDNIYSEV   F
Subjt:  MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEVSFPF

A0A6J1I2S7 uncharacterized protein LOC111468478 isoform X1

1.8e-38

90.53

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Query:  MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEVSFPF
        MD+ SS PSSSSSPLKR TGQ+LDGSEIMELVAN HVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEV   F
Subjt:  MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEVSFPF

A0A6J1JLV7 uncharacterized protein LOC111486388 isoform X1

4.8e-36

87.91

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Query:  MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEV
        MDSASSPPSSSSSP+KRPTGQVLDGSEIMELV NNHVFSSFV HKFHELDTDKDGKLSL+ELHP +ADIGAALGLPP  TS  SD IYSEV
Subjt:  MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G38810.2 Calcium-binding EF-hand family protein

3.6e-23

73.24

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Query:  QVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEV
        QVLDGS+I+ELV N  VF  FV+ KF +LD D+DGKLS+ EL PAVADIGAALGLP QGTS DSD+IYSEV
Subjt:  QVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEV

Sequences

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CDS sequence

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ATGGATTCTGCTTCTTCACCACCTTCTTCATCATCTTCACCATTGAAACGACCTACTGGACAGGTTCTGGACGGTTCAGAAATTATGGAGTTGGTTGCCAACAACCACGT
CTTCTCCTCTTTCGTCGACCATAAGTTTCACGAGCTCGACACCGACAAAGACGGCAAACTTTCCCTCAAAGAACTTCACCCTGCCGTCGCCGACATTGGTGCCGCTCTTG
GCCTTCCTCCTCAAGGCACTTCCCTTGATTCCGACAACATTTACTCTGAGGTTTCCTTTCCTTTCCTTTCCTTCCTCCTCTTCTTCTTATTCTTCATTAGGTTTTCTTCA
TTATTTATGGCCGAATTACTTGGATTGGAATTTCTGAATGCGGATTTCCTGATAACGACAAGAACTGTCCCTATTTGTGTAGTTTGTTGCTTCTGTAGTTGCTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MDSASSPPSSSSSPLKRPTGQVLDGSEIMELVANNHVFSSFVDHKFHELDTDKDGKLSLKELHPAVADIGAALGLPPQGTSLDSDNIYSEVSFPFLSFLLFFLFFIRFSS
LFMAELLGLEFLNADFLITTRTVPICVVCCFCSC

HG10005679 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome