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HG10005696 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005696
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionAuxin-responsive protein
Genome locationChr07:4855180..4855449
RNA-Seq ExpressionHG10005696
SyntenyHG10005696
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572089.1 Auxin-responsive protein SAUR23, partial [Cucurbita argyrosperma subsp. sororia]9.9e-4294.38Show/hide
Query:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLNRP
        MR+LQLLRRPSTSTKEGV VVPKGYCAVYVGEI+KKRFVIPVTYLNQPCFQDLLSQAE+EFGYYH MGGLTIQCREDIFTNLISQLNRP
Subjt:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLNRP

KGN43209.1 hypothetical protein Csa_020258 [Cucumis sativus]1.1e-4094.38Show/hide
Query:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLNRP
        MRILQLLRR STSTKEGVAVVPKGYCAVYVGEI+KKRFVIP+TYLNQPCFQ LLSQAEEEFGYYH MGGLTIQCREDIFTNLISQLNRP
Subjt:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLNRP

XP_011658582.1 auxin-responsive protein SAUR24 [Cucumis sativus]3.1e-2767.82Show/hide
Query:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN
        MR++ LL+R      +GV+ +PKGYCAVYVGE +KKRF+IP++YLNQPCFQ+LLSQ EEEFGY+H MGGLTI C++ IFTNLIS+LN
Subjt:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN

XP_016900447.1 PREDICTED: auxin-induced protein 15A-like [Cucumis melo]1.9e-3792.13Show/hide
Query:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLNRP
        MRILQLLRR S   KEGVAVVPKGYCAVYVGEI+KKRFVIPVTYLNQPCFQ LLSQAEEEFGYYH MGGLTIQCREDIFTNLISQLNRP
Subjt:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLNRP

XP_022136192.1 auxin-responsive protein SAUR24-like [Momordica charantia]3.6e-2872.41Show/hide
Query:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN
        M + QLL+R      +GV+ VPKGYCAVYVGE +KKRFVIP++YLNQPCFQ+LL QAEEEFGYYH MGGLTI CR+DIFT+LIS+LN
Subjt:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN

TrEMBL top hitse value%identityAlignment
A0A0A0K2F9 Uncharacterized protein5.3e-4194.38Show/hide
Query:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLNRP
        MRILQLLRR STSTKEGVAVVPKGYCAVYVGEI+KKRFVIP+TYLNQPCFQ LLSQAEEEFGYYH MGGLTIQCREDIFTNLISQLNRP
Subjt:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLNRP

A0A0A0K4K1 Uncharacterized protein1.1e-2770.11Show/hide
Query:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN
        MR+  LL+R      +GV+ VPKGYCAVYVGE +KKRFVIP+TYLN+PCFQ LL Q EEEFGYYH MGGLTI CR+DIFT+LIS +N
Subjt:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN

A0A1S4DWU0 auxin-induced protein 15A-like9.3e-3892.13Show/hide
Query:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLNRP
        MRILQLLRR S   KEGVAVVPKGYCAVYVGEI+KKRFVIPVTYLNQPCFQ LLSQAEEEFGYYH MGGLTIQCREDIFTNLISQLNRP
Subjt:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLNRP

A0A5D3CL76 Auxin-induced protein 15A-like9.3e-3892.13Show/hide
Query:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLNRP
        MRILQLLRR S   KEGVAVVPKGYCAVYVGEI+KKRFVIPVTYLNQPCFQ LLSQAEEEFGYYH MGGLTIQCREDIFTNLISQLNRP
Subjt:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLNRP

A0A6J1C4W2 auxin-responsive protein SAUR24-like1.8e-2872.41Show/hide
Query:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN
        M + QLL+R      +GV+ VPKGYCAVYVGE +KKRFVIP++YLNQPCFQ+LL QAEEEFGYYH MGGLTI CR+DIFT+LIS+LN
Subjt:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG71.7e-2064.63Show/hide
Query:  LLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN
        L  R   S+K  V   PKGY AVYVGE   KRFVIPV++LNQP FQDLLSQAEEEFGY H MGGLTI C ED+F ++ S L+
Subjt:  LLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN

P33079 Auxin-induced protein 10A53.4e-2157.3Show/hide
Query:  RILQLLRRPSTSTKEGVAV---VPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN
        RI  ++RR S  T +  +    VPKGY AVYVG+ + +RF IPV+YLN+P FQ+LLSQAEEEFGY H MGGLTI C+E+ F N+ + LN
Subjt:  RILQLLRRPSTSTKEGVAV---VPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN

P33081 Auxin-induced protein 15A5.3e-2266.25Show/hide
Query:  RRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN
        R P        A  PKGY AVYVGE + KRFVIPV+YLNQP FQDLLSQAEEEFGY H MGGLTI C ED+F  + S LN
Subjt:  RRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN

P33082 Auxin-induced protein X151.3e-2060Show/hide
Query:  RRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN
        R P           PKGY AVYVGE + KRFVIPV+Y+NQP FQDLL+QAEEEFGY H MGGLTI C E++F  +   LN
Subjt:  RRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN

Q9FK62 Auxin-responsive protein SAUR241.7e-2063.16Show/hide
Query:  STSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQL
        S ST  G A  PKG+ AVYVGE +KKR+++PV+YLNQP FQ LLS++EEEFG+ H MGGLTI C ED F N+ S+L
Subjt:  STSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family2.7e-2158.33Show/hide
Query:  QLLRRPSTSTKEGVAVVPKGYCAVYVGE-IRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN
        QLL+  S S+      +PKG+ AVYVGE ++K+RFV+PVTYL+ PCFQ LL +AEEEFG+ H MGGLTI C E IF +L S+L+
Subjt:  QLLRRPSTSTKEGVAVVPKGYCAVYVGE-IRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN

AT4G38840.1 SAUR-like auxin-responsive protein family6.4e-2358.14Show/hide
Query:  RILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN
        +IL+  +  S+S+      VPKGY AVYVGE   KRFV+PV+YL+QP FQDLL +AEEEFG+ H MGGLTI C E+IF +L S+ N
Subjt:  RILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN

AT5G18020.1 SAUR-like auxin-responsive protein family2.7e-2153.57Show/hide
Query:  QLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLNR
        ++L R +T+     +  PKG+ AVYVGE +KKR+++P++YLNQP FQ LLS++EEEFG+ H MGGLTI C ED F N+ S+  R
Subjt:  QLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLNR

AT5G18060.1 SAUR-like auxin-responsive protein family1.6e-2151.72Show/hide
Query:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN
        +R L + ++  + +   V+  PKG+ AVYVGE +KKR+++P++YLNQP FQ LLS++EEEFG+ H MGGLTI C ED F N+ S+L+
Subjt:  MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLN

AT5G18080.1 SAUR-like auxin-responsive protein family1.2e-2163.16Show/hide
Query:  STSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQL
        S ST  G A  PKG+ AVYVGE +KKR+++PV+YLNQP FQ LLS++EEEFG+ H MGGLTI C ED F N+ S+L
Subjt:  STSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAATTCTTCAGCTTCTTCGACGACCTTCCACCTCAACAAAGGAAGGAGTGGCAGTAGTTCCGAAGGGCTACTGCGCAGTCTATGTTGGAGAGATTCGAAAGAAGCG
TTTTGTCATCCCTGTAACTTACTTGAACCAACCATGTTTTCAAGACTTGCTTAGTCAAGCTGAAGAAGAATTTGGTTATTATCATTCTATGGGTGGTCTTACTATTCAGT
GTAGAGAAGATATCTTCACCAATCTCATTTCTCAGTTAAATAGGCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAATTCTTCAGCTTCTTCGACGACCTTCCACCTCAACAAAGGAAGGAGTGGCAGTAGTTCCGAAGGGCTACTGCGCAGTCTATGTTGGAGAGATTCGAAAGAAGCG
TTTTGTCATCCCTGTAACTTACTTGAACCAACCATGTTTTCAAGACTTGCTTAGTCAAGCTGAAGAAGAATTTGGTTATTATCATTCTATGGGTGGTCTTACTATTCAGT
GTAGAGAAGATATCTTCACCAATCTCATTTCTCAGTTAAATAGGCCATGA
Protein sequenceShow/hide protein sequence
MRILQLLRRPSTSTKEGVAVVPKGYCAVYVGEIRKKRFVIPVTYLNQPCFQDLLSQAEEEFGYYHSMGGLTIQCREDIFTNLISQLNRP