; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10005732 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10005732
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCRM domain-containing protein
Genome locationChr07:5211359..5213570
RNA-Seq ExpressionHG10005732
SyntenyHG10005732
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001890 - RNA-binding, CRM domain
IPR035920 - YhbY-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022267.1 yqeI [Cucurbita argyrosperma subsp. argyrosperma]2.1e-9277.61Show/hide
Query:  MGASITSSHS-----HSLLLRSVPSSLSTFFSKPSAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFD-----EEDD
        MGASI SS S     HSLLLRSVPSSLSTF  +PS A IS  C HQFKPNSS FL R+SPH SRSFT SAS+SFSRSFSSTIS  S V F+     ++D+
Subjt:  MGASITSSHS-----HSLLLRSVPSSLSTFFSKPSAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFD-----EEDD

Query:  EIDYEDEVEIEDFEREE-AVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL
        E DYEDEVEIEDFE E+  V DG ET VAS+ SS++ + +EVKNIPSLT+KEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK+L
Subjt:  EIDYEDEVEIEDFEREE-AVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL

Query:  GNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK
        GNCP ELEDVVR+LEESTGSVVV++IGRTVIIYRPSI+KMKAEEEKRRARK+YVRKEPDRVK  LQVK
Subjt:  GNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK

XP_004148536.1 uncharacterized protein LOC101213060 [Cucumis sativus]6.6e-10787.26Show/hide
Query:  MGASITSSHSHSLLLRSVPSSLSTFFSKPS-AAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYEDEVE
        MGASI SSHSHSLLLRS+PSS STFFSKPS AAAISTVCFHQFKP+SS  LTRESPHH R FT SA LSFSRSFSSTIS PSEVIFDE DDEI+ +DE +
Subjt:  MGASITSSHSHSLLLRSVPSSLSTFFSKPS-AAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYEDEVE

Query:  IED-FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELED
         ED  E E+ VGDGTETGVASELSS + +RNEVKNIPSLTIKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELED
Subjt:  IED-FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELED

Query:  VVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK
        VVRKL ESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARK+Y+RKEPDRVKSILQ K
Subjt:  VVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK

XP_008448058.1 PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo]4.0e-10484.79Show/hide
Query:  MGASITS----SHSHSLLLRSVPSSLSTFFSKPSA-AAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYE
        M ASI S    SHSHSLLLRSVPSS STFFSKPSA AA STVCFHQFKP+SS FLTR+SPH+SR FT S SLSFSR FSST+SGPSEV FDE DDEI+ +
Subjt:  MGASITS----SHSHSLLLRSVPSSLSTFFSKPSA-AAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYE

Query:  DEVEIED-FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE
        DE + ED  E E++VGDGTE GVASELSS + NRNEVKNIPSLTIKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE
Subjt:  DEVEIED-FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE

Query:  ELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK
        +LEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRR+RKIY+RKEPDRVKSILQ K
Subjt:  ELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK

XP_022971306.1 uncharacterized protein LOC111470060 [Cucurbita maxima]7.1e-9377.99Show/hide
Query:  MGASITSSHS-----HSLLLRSVPSSLSTFFSKPSAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFD-----EEDD
        MGASI SS S     HSLLLRSVPSSLSTF  +PS A IS  C HQFKPNSS FL R+SPH SRSFT SAS+SFSRSFSS ISG S V F+     ++DD
Subjt:  MGASITSSHS-----HSLLLRSVPSSLSTFFSKPSAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFD-----EEDD

Query:  EIDYEDEVEIEDFEREE-AVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL
        E DYEDEVEIEDFE E+  V DG ET VAS+ SS++ +R+EVK+IPSLT+KEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK+L
Subjt:  EIDYEDEVEIEDFEREE-AVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL

Query:  GNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK
        GNCP ELEDVVR+LEESTGSVVV++IGRTVIIYRPSI+KMKAEEEKRRARKIYVRKEPDRVK  LQ K
Subjt:  GNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK

XP_038888218.1 uncharacterized protein LOC120078082 [Benincasa hispida]3.4e-10385.44Show/hide
Query:  MGASITSSHSHSLLLRSVPSSLSTFFSKPS-AAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYEDEVE
        MGASI S HSHSLLLRSVPSS STFFSKPS AAA + VCF+QFKP SSNF TRES HHSRSF  S SLSF RSF+STISGPSE  FDE+DDEI+ EDE +
Subjt:  MGASITSSHSHSLLLRSVPSSLSTFFSKPS-AAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYEDEVE

Query:  IED---FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEEL
         ED    EREEAV DG ETGVASELSS M NRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEEL
Subjt:  IED---FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEEL

Query:  EDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK
        ED VRKLEESTGSVVVNQIGRTVIIYRPSITKMKAE++KR+ARKIYVRKE DRVKSILQ K
Subjt:  EDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK

TrEMBL top hitse value%identityAlignment
A0A0A0K2C3 CRM domain-containing protein3.2e-10787.26Show/hide
Query:  MGASITSSHSHSLLLRSVPSSLSTFFSKPS-AAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYEDEVE
        MGASI SSHSHSLLLRS+PSS STFFSKPS AAAISTVCFHQFKP+SS  LTRESPHH R FT SA LSFSRSFSSTIS PSEVIFDE DDEI+ +DE +
Subjt:  MGASITSSHSHSLLLRSVPSSLSTFFSKPS-AAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYEDEVE

Query:  IED-FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELED
         ED  E E+ VGDGTETGVASELSS + +RNEVKNIPSLTIKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELED
Subjt:  IED-FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELED

Query:  VVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK
        VVRKL ESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARK+Y+RKEPDRVKSILQ K
Subjt:  VVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK

A0A1S3BJF7 uncharacterized protein LOC1034903502.0e-10484.79Show/hide
Query:  MGASITS----SHSHSLLLRSVPSSLSTFFSKPSA-AAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYE
        M ASI S    SHSHSLLLRSVPSS STFFSKPSA AA STVCFHQFKP+SS FLTR+SPH+SR FT S SLSFSR FSST+SGPSEV FDE DDEI+ +
Subjt:  MGASITS----SHSHSLLLRSVPSSLSTFFSKPSA-AAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYE

Query:  DEVEIED-FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE
        DE + ED  E E++VGDGTE GVASELSS + NRNEVKNIPSLTIKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE
Subjt:  DEVEIED-FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPE

Query:  ELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK
        +LEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRR+RKIY+RKEPDRVKSILQ K
Subjt:  ELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK

A0A5D3DFJ1 Putative RNA-binding CRS1 / YhbY domain protein1.5e-6495.14Show/hide
Query:  ETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVN
        ETGVASELSS + NRNEVKNIPSLTIKEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVN
Subjt:  ETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVN

Query:  QIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK
        QIGRTVIIYRPSITKMKAEEEKRR+RKIY+RKEPDRVKSILQ K
Subjt:  QIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK

A0A6J1C409 uncharacterized protein LOC1110077231.5e-5978.92Show/hide
Query:  DYEDEVEIEDFE-REEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGN
        DYE EV I DFE  EE++G  ++    S+LSSS+ N +EVKN+PSLT+KEKKELASYAHSLGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIKIL N
Subjt:  DYEDEVEIEDFE-REEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGN

Query:  CPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK
        CP EL+D VR+LEESTGSVVV+QIGRTVIIYRPSI+KMKAEE+KR+ARKIYVRKEPDRVKSILQ K
Subjt:  CPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK

A0A6J1I2Z3 uncharacterized protein LOC1114700603.5e-9377.99Show/hide
Query:  MGASITSSHS-----HSLLLRSVPSSLSTFFSKPSAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFD-----EEDD
        MGASI SS S     HSLLLRSVPSSLSTF  +PS A IS  C HQFKPNSS FL R+SPH SRSFT SAS+SFSRSFSS ISG S V F+     ++DD
Subjt:  MGASITSSHS-----HSLLLRSVPSSLSTFFSKPSAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFD-----EEDD

Query:  EIDYEDEVEIEDFEREE-AVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL
        E DYEDEVEIEDFE E+  V DG ET VAS+ SS++ +R+EVK+IPSLT+KEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK+L
Subjt:  EIDYEDEVEIEDFEREE-AVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKIL

Query:  GNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK
        GNCP ELEDVVR+LEESTGSVVV++IGRTVIIYRPSI+KMKAEEEKRRARKIYVRKEPDRVK  LQ K
Subjt:  GNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK

SwissProt top hitse value%identityAlignment
P0AGK4 RNA-binding protein YhbY6.9e-0633.33Show/hide
Query:  SLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E    +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS

P0AGK5 RNA-binding protein YhbY6.9e-0633.33Show/hide
Query:  SLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E    +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS

P0AGK6 RNA-binding protein YhbY6.9e-0633.33Show/hide
Query:  SLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E    +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS

P0AGK7 RNA-binding protein YhbY6.9e-0633.33Show/hide
Query:  SLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+KI     E    +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS

P54454 Probable RNA-binding protein YqeI1.1e-0839.33Show/hide
Query:  LTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS
        LT K+K+ L S AH L    +   VGK GV   +     E LEA EL+K+ +L NC E+  DV   L + + S +V  IG T+++Y+ S
Subjt:  LTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPS

Arabidopsis top hitse value%identityAlignment
AT2G21350.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.2e-3249.03Show/hide
Query:  STVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSR---SFSSTISGPSEVIFDEEDDEIDYEDEVEIEDFEREEAVGDGTETGVASELSSSMANRNEV
        S VC    +P S + L R+S HH+     S+SL   R   SFS  +   S    DE + +   ED V +      E   DG E G  SEL+      N  
Subjt:  STVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSR---SFSSTISGPSEVIFDEEDDEIDYEDEVEIEDFEREEAVGDGTETGVASELSSSMANRNEV

Query:  KNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKA
         +   L+ KEK++LASYAH LG KLKSQLVGKSGVT  +  SF+ETLE NELLK+KI   CP ELED++ +LEE+TGSV V QI RTVI+YRPS TK+KA
Subjt:  KNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKA

Query:  EEEKRR
        +E+K+R
Subjt:  EEEKRR

AT4G39040.1 RNA-binding CRS1 / YhbY (CRM) domain protein5.5e-3542.91Show/hide
Query:  ASITSSH-SHSLLLRSVPSSLSTFFSKPSAAAIS-TVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEED-----DEIDYE
        AS +S+H  H+LL    P S    F +P   + S +   H+ KP   +F ++  P HS S          +SFSS      E   + ED     +E +YE
Subjt:  ASITSSH-SHSLLLRSVPSSLSTFFSKPSAAAIS-TVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEED-----DEIDYE

Query:  DEVEIED-----------FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELL
        DE E ++            E  EA  + +E G   E + +   +    +   L+IKEKKELASYAHSLG KLK QLVGKSGVT  +  SF+ETLE NELL
Subjt:  DEVEIED-----------FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELL

Query:  KIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRK
        K+KI    P+ELED V+ LEE+TGSV V QIGRTVI+YRPS TKMKAE +K+   ++ + +
Subjt:  KIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRK

AT4G39040.2 RNA-binding CRS1 / YhbY (CRM) domain protein5.5e-3542.91Show/hide
Query:  ASITSSH-SHSLLLRSVPSSLSTFFSKPSAAAIS-TVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEED-----DEIDYE
        AS +S+H  H+LL    P S    F +P   + S +   H+ KP   +F ++  P HS S          +SFSS      E   + ED     +E +YE
Subjt:  ASITSSH-SHSLLLRSVPSSLSTFFSKPSAAAIS-TVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEED-----DEIDYE

Query:  DEVEIED-----------FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELL
        DE E ++            E  EA  + +E G   E + +   +    +   L+IKEKKELASYAHSLG KLK QLVGKSGVT  +  SF+ETLE NELL
Subjt:  DEVEIED-----------FEREEAVGDGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELL

Query:  KIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRK
        K+KI    P+ELED V+ LEE+TGSV V QIGRTVI+YRPS TKMKAE +K+   ++ + +
Subjt:  KIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVIIYRPSITKMKAEEEKRRARKIYVRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTTCGATAACGTCCTCTCACTCTCACTCTCTTCTTCTCCGGTCAGTTCCCTCTTCTTTATCCACCTTCTTCTCTAAACCCTCCGCCGCCGCCATCTCCACCGT
TTGCTTCCATCAATTTAAACCCAACAGTTCAAACTTCCTCACTCGCGAATCTCCTCACCATTCCCGGTCTTTCACTTCCTCCGCATCCCTTTCCTTCTCTCGCTCCTTTT
CCTCCACCATTTCCGGTCCCTCGGAGGTCATATTTGATGAAGAAGACGATGAAATTGATTACGAAGATGAAGTTGAAATCGAAGATTTCGAACGGGAAGAGGCCGTTGGG
GATGGAACGGAAACTGGTGTGGCTTCGGAGTTGTCTTCATCAATGGCGAATAGAAATGAAGTGAAGAATATTCCGAGCTTGACGATTAAGGAGAAGAAAGAGCTGGCATC
GTATGCTCATAGCTTGGGGAAGAAGCTGAAAAGTCAGTTGGTGGGAAAGTCTGGCGTCACTCCTGGCTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTC
TCAAGATCAAAATTCTTGGAAACTGTCCAGAGGAACTGGAGGATGTGGTGAGGAAATTGGAGGAATCAACTGGCTCTGTGGTGGTGAATCAAATTGGCAGAACTGTTATT
ATTTATAGGCCCAGCATCACAAAAATGAAAGCAGAGGAAGAAAAAAGACGAGCCCGAAAAATTTATGTGAGAAAAGAGCCCGATCGAGTCAAATCCATTTTGCAGGTAAA
GTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCTTCGATAACGTCCTCTCACTCTCACTCTCTTCTTCTCCGGTCAGTTCCCTCTTCTTTATCCACCTTCTTCTCTAAACCCTCCGCCGCCGCCATCTCCACCGT
TTGCTTCCATCAATTTAAACCCAACAGTTCAAACTTCCTCACTCGCGAATCTCCTCACCATTCCCGGTCTTTCACTTCCTCCGCATCCCTTTCCTTCTCTCGCTCCTTTT
CCTCCACCATTTCCGGTCCCTCGGAGGTCATATTTGATGAAGAAGACGATGAAATTGATTACGAAGATGAAGTTGAAATCGAAGATTTCGAACGGGAAGAGGCCGTTGGG
GATGGAACGGAAACTGGTGTGGCTTCGGAGTTGTCTTCATCAATGGCGAATAGAAATGAAGTGAAGAATATTCCGAGCTTGACGATTAAGGAGAAGAAAGAGCTGGCATC
GTATGCTCATAGCTTGGGGAAGAAGCTGAAAAGTCAGTTGGTGGGAAAGTCTGGCGTCACTCCTGGCTTGGCTACTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTC
TCAAGATCAAAATTCTTGGAAACTGTCCAGAGGAACTGGAGGATGTGGTGAGGAAATTGGAGGAATCAACTGGCTCTGTGGTGGTGAATCAAATTGGCAGAACTGTTATT
ATTTATAGGCCCAGCATCACAAAAATGAAAGCAGAGGAAGAAAAAAGACGAGCCCGAAAAATTTATGTGAGAAAAGAGCCCGATCGAGTCAAATCCATTTTGCAGGTAAA
GTAA
Protein sequenceShow/hide protein sequence
MGASITSSHSHSLLLRSVPSSLSTFFSKPSAAAISTVCFHQFKPNSSNFLTRESPHHSRSFTSSASLSFSRSFSSTISGPSEVIFDEEDDEIDYEDEVEIEDFEREEAVG
DGTETGVASELSSSMANRNEVKNIPSLTIKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKILGNCPEELEDVVRKLEESTGSVVVNQIGRTVI
IYRPSITKMKAEEEKRRARKIYVRKEPDRVKSILQVK